BLASTX 7.6.2
Query= UN23046 /QuerySize=1134
(1133 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G55330.1 | Symbols: AGP21, ATAGP21 | AGP21 | c... 87 2e-017
TAIR9_protein||AT3G13520.1 | Symbols: AGP12, ATAGP12 | AGP12 (AR... 84 1e-016
TAIR9_protein||AT4G26320.1 | Symbols: AGP13 | AGP13 (arabinogala... 69 4e-012
TAIR9_protein||AT5G56540.1 | Symbols: AGP14, ATAGP14 | AGP14 (AR... 64 2e-010
TAIR9_protein||AT4G23640.1 | Symbols: TRH1, ATKT3, KUP4 | TRH1 (... 49 7e-006
>TAIR9_protein||AT1G55330.1 | Symbols: AGP21, ATAGP21 | AGP21 |
chr1:20648634-20648810 REVERSE
Length = 59
Score = 87 bits (213), Expect = 2e-017
Identities = 48/57 (84%), Positives = 49/57 (85%), Gaps = 3/57 (5%)
Frame = +2
Query: 797 MKMMVVFMVVAVAFSAVGQAAAATVEAPAPSPTSDAAMFVPALFASVVALASGLLF* 967
MKMMV MVVAVAFSA A AATVEAPAPSPTSDAAMFVPALFASVVALASG +F*
Sbjct: 6 MKMMVFIMVVAVAFSA---ATAATVEAPAPSPTSDAAMFVPALFASVVALASGFIF* 59
>TAIR9_protein||AT3G13520.1 | Symbols: AGP12, ATAGP12 | AGP12 (ARABINOGALACTAN
PROTEIN 12) | chr3:4409087-4409269 FORWARD
Length = 61
Score = 84 bits (207), Expect = 1e-016
Identities = 49/62 (79%), Positives = 50/62 (80%), Gaps = 3/62 (4%)
Frame = +2
Query: 788 MESMKM--MVVFMVVAVAFSAVGQAAAATVEAPAPSPTSDAAMFVPALFASVVALASGLL 961
MESMKM +VV MV VAFSAVG AA T EAPAPSPTSDAAMFVPALFASV ALASG L
Sbjct: 1 MESMKMKLIVVLMVAIVAFSAVGNVAAQT-EAPAPSPTSDAAMFVPALFASVAALASGFL 59
Query: 962 F* 967
F*
Sbjct: 60 F* 61
>TAIR9_protein||AT4G26320.1 | Symbols: AGP13 | AGP13 (arabinogalactan protein
13) | chr4:13317235-13317414 REVERSE
Length = 60
Score = 69 bits (168), Expect = 4e-012
Identities = 40/62 (64%), Positives = 46/62 (74%), Gaps = 4/62 (6%)
Frame = +2
Query: 788 MESMKM--MVVFMVVAVAFSAVGQAAAATVEAPAPSPTSDAAMFVPALFASVVALASGLL 961
ME+MKM V +V A+AFSAV QAAA VEAPAPSPTSDA++ +PA FASV LA G L
Sbjct: 1 MEAMKMRLFVAVLVAAMAFSAVQQAAA--VEAPAPSPTSDASLAIPAFFASVATLAFGFL 58
Query: 962 F* 967
F*
Sbjct: 59 F* 60
>TAIR9_protein||AT5G56540.1 | Symbols: AGP14, ATAGP14 | AGP14 (ARABINOGALACTAN
PROTEIN 14) | chr5:22893243-22893425 FORWARD
Length = 61
Score = 64 bits (154), Expect = 2e-010
Identities = 35/62 (56%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Frame = +2
Query: 788 MESMKM--MVVFMVVAVAFSAVGQAAAATVEAPAPSPTSDAAMFVPALFASVVALASGLL 961
ME+MKM VV +V +AFS V Q AA V+APAPSPTSDA+ F+P FASV +A G
Sbjct: 1 MEAMKMKLYVVVLVAVIAFSTVHQTVAA-VDAPAPSPTSDASSFIPTFFASVAVMAFGFF 59
Query: 962 F* 967
F*
Sbjct: 60 F* 61
>TAIR9_protein||AT4G23640.1 | Symbols: TRH1, ATKT3, KUP4 | TRH1 (TINY ROOT HAIR
1); potassium ion transmembrane transporter | chr4:12320476-12324291
REVERSE
Length = 776
Score = 49 bits (114), Expect = 7e-006
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = -3
Query: 666 RRNKYSQVLLLVY*SFGLVFGDLRVSSLYVS*CIF 562
RRN+ +Q+LLL Y SFGLVFGDL +S LYV C F
Sbjct: 4 RRNRCNQILLLAYQSFGLVFGDLSISPLYVYKCTF 38
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,916,432,750
Number of Sequences: 33410
Number of Extensions: 11916432750
Number of Successful Extensions: 381292804
Number of sequences better than 0.0: 0
|