BLASTX 7.6.2
Query= UN23141 /QuerySize=1009
(1008 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G17350.1 | Symbols: | auxin-induced-related /... 445 2e-125
TAIR9_protein||AT1G72420.1 | Symbols: | FUNCTIONS IN: molecular... 401 6e-112
TAIR9_protein||AT1G17350.2 | Symbols: | auxin-induced-related /... 323 2e-088
>TAIR9_protein||AT1G17350.1 | Symbols: | auxin-induced-related /
indole-3-acetic acid induced-related | chr1:5942391-5944272 FORWARD
Length = 228
Score = 445 bits (1144), Expect = 2e-125
Identities = 211/228 (92%), Positives = 221/228 (96%)
Frame = +1
Query: 151 MSRFRSLLQASVNATKKAFTWNIEEWVPPAEKYIFKFHSKEDLKRWHLYSDSQYGGLSSA 330
MSRFRSLLQASVNATKKA TWN+EEWVPPAEK+IFKFHSKEDLK+WHLYSDS+YGGLSSA
Sbjct: 1 MSRFRSLLQASVNATKKALTWNVEEWVPPAEKHIFKFHSKEDLKKWHLYSDSEYGGLSSA 60
Query: 331 SLEIPDGGKGSDGTGIFSGNLSVDLSEGSKLNISRSGFCGMRSKKFDGFIDLDGYDAIAM 510
SLEIPD G GSD TG+FSGNLSVDLSEGSK NISRSGFCGMRSKKFDGFIDLDGYDAIA+
Sbjct: 61 SLEIPDKGDGSDCTGVFSGNLSVDLSEGSKWNISRSGFCGMRSKKFDGFIDLDGYDAIAL 120
Query: 511 RLRGDGRCYISTIYTENWVNSPGQTEDNSWQAFVFAPKDRWYTAKIPLARYLPTWRGNVI 690
R+RGDGRCYISTIYTENWVNSPGQ+EDNSWQAFVFAPKD WYTAKIPLARYLPTWRGNVI
Sbjct: 121 RIRGDGRCYISTIYTENWVNSPGQSEDNSWQAFVFAPKDSWYTAKIPLARYLPTWRGNVI 180
Query: 691 DVEMEMNPGRVLGMSLSVNAEGGAVGARSGAGDFRVEIDWIKALRMP* 834
DVEMEMNPGRVLGMSLSVNAEGGAVGA+SGAGDFRVEIDWIKALR+P*
Sbjct: 181 DVEMEMNPGRVLGMSLSVNAEGGAVGAKSGAGDFRVEIDWIKALRLP* 228
>TAIR9_protein||AT1G72420.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
NADH:ubiquinone oxidoreductase complex I intermediate-associated
protein 30 (InterPro:IPR013857); BEST Arabidopsis thaliana protein
match is: auxin-induced-related / indole-3-acetic acid induced-related
(TAIR:AT1G17350.1); Has 408 Blast hits to 408 proteins in 142 species:
Archae - 0; Bacteria - 97; Metazoa - 96; Fungi - 57; Plants - 46;
Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). |
chr1:27261367-27263186 REVERSE
Length = 229
Score = 401 bits (1028), Expect = 6e-112
Identities = 188/229 (82%), Positives = 206/229 (89%), Gaps = 1/229 (0%)
Frame = +1
Query: 151 MSRFRSLLQASVNATKKAFTWNIEEWVPPAEKYIFKFHSKEDLKRWHLYSDSQYGGLSSA 330
MSRFRSL QASVNATKKA TW +EEWVPP EK IFKF+SKEDLK WHLYSDS+YGGLSSA
Sbjct: 1 MSRFRSLWQASVNATKKALTWELEEWVPPVEKCIFKFNSKEDLKTWHLYSDSEYGGLSSA 60
Query: 331 SLEIPDGGKGSDGTGIFSGNLSVDLSEGSKLNISRSGFCGMRSKKFDGFIDLDGYDAIAM 510
SLEI DGG SD G+FSGNLS D+ EGSK NI+RSGFCGMRSKKFDGFIDL+GYD+IA+
Sbjct: 61 SLEIKDGGNRSDCNGVFSGNLSTDMREGSKWNINRSGFCGMRSKKFDGFIDLEGYDSIAL 120
Query: 511 RLRGDGRCYISTIYTENWVNSPGQTEDNSWQAFVFAPKDRWYTAKIPLARYLPTWRGNVI 690
RL+GDGRCYISTIYTENWVNSPGQ EDNSWQAFVFAPK WYTAK+PL RYLPTW+GNVI
Sbjct: 121 RLKGDGRCYISTIYTENWVNSPGQAEDNSWQAFVFAPKGNWYTAKVPLTRYLPTWKGNVI 180
Query: 691 DVEMEMNPGRVLGMSLSVNAEGGA-VGARSGAGDFRVEIDWIKALRMP* 834
D EMEMNPG V+GMSLSVNA+GG +GA+SGAGDF+VEIDWIKA+RMP*
Sbjct: 181 DAEMEMNPGHVVGMSLSVNAQGGGFIGAKSGAGDFQVEIDWIKAVRMP* 229
>TAIR9_protein||AT1G17350.2 | Symbols: | auxin-induced-related /
indole-3-acetic acid induced-related | chr1:5942391-5944330 FORWARD
Length = 237
Score = 323 bits (826), Expect = 2e-088
Identities = 151/165 (91%), Positives = 159/165 (96%)
Frame = +1
Query: 151 MSRFRSLLQASVNATKKAFTWNIEEWVPPAEKYIFKFHSKEDLKRWHLYSDSQYGGLSSA 330
MSRFRSLLQASVNATKKA TWN+EEWVPPAEK+IFKFHSKEDLK+WHLYSDS+YGGLSSA
Sbjct: 1 MSRFRSLLQASVNATKKALTWNVEEWVPPAEKHIFKFHSKEDLKKWHLYSDSEYGGLSSA 60
Query: 331 SLEIPDGGKGSDGTGIFSGNLSVDLSEGSKLNISRSGFCGMRSKKFDGFIDLDGYDAIAM 510
SLEIPD G GSD TG+FSGNLSVDLSEGSK NISRSGFCGMRSKKFDGFIDLDGYDAIA+
Sbjct: 61 SLEIPDKGDGSDCTGVFSGNLSVDLSEGSKWNISRSGFCGMRSKKFDGFIDLDGYDAIAL 120
Query: 511 RLRGDGRCYISTIYTENWVNSPGQTEDNSWQAFVFAPKDRWYTAK 645
R+RGDGRCYISTIYTENWVNSPGQ+EDNSWQAFVFAPKD WYTAK
Sbjct: 121 RIRGDGRCYISTIYTENWVNSPGQSEDNSWQAFVFAPKDSWYTAK 165
Score = 103 bits (256), Expect = 2e-022
Identities = 49/50 (98%), Positives = 50/50 (100%)
Frame = +1
Query: 646 IPLARYLPTWRGNVIDVEMEMNPGRVLGMSLSVNAEGGAVGARSGAGDFR 795
IPLARYLPTWRGNVIDVEMEMNPGRVLGMSLSVNAEGGAVGA+SGAGDFR
Sbjct: 174 IPLARYLPTWRGNVIDVEMEMNPGRVLGMSLSVNAEGGAVGAKSGAGDFR 223
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,959,358,945
Number of Sequences: 33410
Number of Extensions: 11959358945
Number of Successful Extensions: 381306970
Number of sequences better than 0.0: 0
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