BLASTX 7.6.2
Query= UN23175 /QuerySize=1016
(1015 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G36130.1 | Symbols: | 60S ribosomal protein L... 521 4e-148
TAIR9_protein||AT2G18020.1 | Symbols: EMB2296 | EMB2296 (embryo ... 515 2e-146
TAIR9_protein||AT3G51190.1 | Symbols: | structural constituent ... 470 1e-132
TAIR9_protein||ATCG00830.1 | Symbols: RPL2.1 | encodes a chlorop... 106 2e-023
TAIR9_protein||ATCG01310.1 | Symbols: RPL2.2 | encodes a chlorop... 106 2e-023
TAIR9_protein||AT2G44065.1 | Symbols: | ribosomal protein L2 fa... 80 1e-015
TAIR9_protein||AT2G44065.2 | Symbols: | ribosomal protein L2 fa... 80 1e-015
>TAIR9_protein||AT4G36130.1 | Symbols: | 60S ribosomal protein L8 (RPL8C) |
chr4:17097613-17098656 FORWARD
Length = 259
Score = 521 bits (1340), Expect = 4e-148
Identities = 249/259 (96%), Positives = 256/259 (98%)
Frame = +1
Query: 37 MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 216
MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR
Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
Query: 217 VAFRHPFRYKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHV 396
VAFRHPFR+KKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAV+CNVEHHV
Sbjct: 61 VAFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV 120
Query: 397 GDRGVLARASGDYAIVISHNPDNDTTRVKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 576
GDRGV ARASGDYAIVI+HNPDNDT+R+KLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML
Sbjct: 121 GDRGVFARASGDYAIVIAHNPDNDTSRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180
Query: 577 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 756
KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPG+KVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGKKVGLIAA 240
Query: 757 RRTGRLRGQAAALASKQE* 813
RRTGRLRGQAAALASK +*
Sbjct: 241 RRTGRLRGQAAALASKAD* 259
>TAIR9_protein||AT2G18020.1 | Symbols: EMB2296 | EMB2296 (embryo defective
2296); structural constituent of ribosome | chr2:7837151-7838160
FORWARD
Length = 259
Score = 515 bits (1325), Expect = 2e-146
Identities = 248/259 (95%), Positives = 254/259 (98%)
Frame = +1
Query: 37 MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 216
MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR
Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
Query: 217 VAFRHPFRYKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHV 396
V FRHPFR+KKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHV
Sbjct: 61 VTFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
Query: 397 GDRGVLARASGDYAIVISHNPDNDTTRVKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 576
GDRGVLARASGDYAIVI+HNPD+DTTR+KLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML
Sbjct: 121 GDRGVLARASGDYAIVIAHNPDSDTTRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180
Query: 577 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 756
KAGNAYHKYRVKRN WPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
Query: 757 RRTGRLRGQAAALASKQE* 813
RRTGRLRGQAAA A+K +*
Sbjct: 241 RRTGRLRGQAAASAAKAD* 259
>TAIR9_protein||AT3G51190.1 | Symbols: | structural constituent of ribosome |
chr3:19016606-19017547 REVERSE
Length = 261
Score = 470 bits (1207), Expect = 1e-132
Identities = 227/259 (87%), Positives = 241/259 (93%), Gaps = 1/259 (0%)
Frame = +1
Query: 37 MGRVIRAQRKG-AGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLA 213
MGRVIRAQRKG AGSVFKSHTHHRKGPAKFRSLD+GERNGYLKG+VTEIIHDPGRGAPLA
Sbjct: 1 MGRVIRAQRKGAAGSVFKSHTHHRKGPAKFRSLDYGERNGYLKGLVTEIIHDPGRGAPLA 60
Query: 214 RVAFRHPFRYKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHH 393
RVAFRHPFRY KQKELFVAAEGMYTGQ+LYCGKKA L+VGNVLPL SIPEGAV+CNVE H
Sbjct: 61 RVAFRHPFRYMKQKELFVAAEGMYTGQYLYCGKKANLMVGNVLPLGSIPEGAVICNVELH 120
Query: 394 VGDRGVLARASGDYAIVISHNPDNDTTRVKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPM 573
VGDRG LARASGDYAIVI+HNP+++TTRVKLPSGSKKI+PS CRAMIGQVAGGGRTEKP+
Sbjct: 121 VGDRGALARASGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAMIGQVAGGGRTEKPL 180
Query: 574 LKAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 753
LKAGNAYHKY+ KRNCWP VRGVAMNPVEHPHGGGNHQHIGHASTVRRD G KVG IA
Sbjct: 181 LKAGNAYHKYKAKRNCWPVVRGVAMNPVEHPHGGGNHQHIGHASTVRRDKSAGAKVGQIA 240
Query: 754 ARRTGRLRGQAAALASKQE 810
ARRTGR RG AA LA+K +
Sbjct: 241 ARRTGRRRGAAATLAAKAD 259
>TAIR9_protein||ATCG00830.1 | Symbols: RPL2.1 | encodes a chloroplast ribosomal
protein L2, a constituent of the large subunit of the ribosomal complex
| chrC:84337-85843 REVERSE
Length = 275
Score = 106 bits (264), Expect = 2e-023
Identities = 66/199 (33%), Positives = 99/199 (49%), Gaps = 22/199 (11%)
Frame = +1
Query: 100 HRKGPAK--FRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVAFRHPFRYKKQKELFVAA 273
HR G K +R +DF + G + I +DP R A + + + +K +
Sbjct: 51 HRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYG-----DGEKRYILHP 105
Query: 274 EGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVLARASGDYAIVISH 453
G G + G + + +GN LPL +P G + N+E +G G LARA+G A +I+
Sbjct: 106 RGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIA- 164
Query: 454 NPDNDTTRVKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNCW--- 624
+ + +KLPSG +++ C A +GQV G +K + +AG+ CW
Sbjct: 165 -KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGS---------KCWLGK 214
Query: 625 -PKVRGVAMNPVEHPHGGG 678
P VRGV MNPV+HPHGGG
Sbjct: 215 RPVVRGVVMNPVDHPHGGG 233
>TAIR9_protein||ATCG01310.1 | Symbols: RPL2.2 | encodes a chloroplast ribosomal
protein L2, a constituent of the large subunit of the ribosomal complex
| chrC:152806-154312 FORWARD
Length = 275
Score = 106 bits (264), Expect = 2e-023
Identities = 66/199 (33%), Positives = 99/199 (49%), Gaps = 22/199 (11%)
Frame = +1
Query: 100 HRKGPAK--FRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVAFRHPFRYKKQKELFVAA 273
HR G K +R +DF + G + I +DP R A + + + +K +
Sbjct: 51 HRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYG-----DGEKRYILHP 105
Query: 274 EGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVLARASGDYAIVISH 453
G G + G + + +GN LPL +P G + N+E +G G LARA+G A +I+
Sbjct: 106 RGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIA- 164
Query: 454 NPDNDTTRVKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNCW--- 624
+ + +KLPSG +++ C A +GQV G +K + +AG+ CW
Sbjct: 165 -KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGS---------KCWLGK 214
Query: 625 -PKVRGVAMNPVEHPHGGG 678
P VRGV MNPV+HPHGGG
Sbjct: 215 RPVVRGVVMNPVDHPHGGG 233
>TAIR9_protein||AT2G44065.1 | Symbols: | ribosomal protein L2 family protein |
chr2:18228860-18230368 FORWARD
Length = 215
Score = 80 bits (197), Expect = 1e-015
Identities = 48/138 (34%), Positives = 69/138 (50%), Gaps = 6/138 (4%)
Frame = +1
Query: 325 VVGNVLPLRSIPEGAVVCNVEHHVGDRGVLARASGDYAIVISHNPDNDTTRVKLPSGSKK 504
++G+ +PL + G ++ N+E + G + RA+G A ++ P +KLPSG K
Sbjct: 58 MIGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKILK-EPAKGKCLIKLPSGDTK 116
Query: 505 IVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNH 684
+ + CRA IG V+ K + KAG + PKVRGVAMNP +HPHGGG
Sbjct: 117 WINAKCRATIGTVSNPSHGTKKLYKAGQSRW-----LGIRPKVRGVAMNPCDHPHGGGEG 171
Query: 685 QHIGHASTVRRDAPPGQK 738
+ S R P K
Sbjct: 172 KSKSSGSRGRTSVSPWGK 189
>TAIR9_protein||AT2G44065.2 | Symbols: | ribosomal protein L2 family protein |
chr2:18228860-18230368 FORWARD
Length = 215
Score = 80 bits (197), Expect = 1e-015
Identities = 48/138 (34%), Positives = 69/138 (50%), Gaps = 6/138 (4%)
Frame = +1
Query: 325 VVGNVLPLRSIPEGAVVCNVEHHVGDRGVLARASGDYAIVISHNPDNDTTRVKLPSGSKK 504
++G+ +PL + G ++ N+E + G + RA+G A ++ P +KLPSG K
Sbjct: 58 MIGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKILK-EPAKGKCLIKLPSGDTK 116
Query: 505 IVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNH 684
+ + CRA IG V+ K + KAG + PKVRGVAMNP +HPHGGG
Sbjct: 117 WINAKCRATIGTVSNPSHGTKKLYKAGQSRW-----LGIRPKVRGVAMNPCDHPHGGGEG 171
Query: 685 QHIGHASTVRRDAPPGQK 738
+ S R P K
Sbjct: 172 KSKSSGSRGRTSVSPWGK 189
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,001,557,611
Number of Sequences: 33410
Number of Extensions: 12001557611
Number of Successful Extensions: 381315744
Number of sequences better than 0.0: 0
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