BLASTX 7.6.2

Query= UN23195 /QuerySize=1014
        (1013 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT4G39040.1 | Symbols:  | RNA binding | chr4:1818...    397   7e-111
TAIR9_protein||AT4G39040.2 | Symbols:  | RNA binding | chr4:1818...    359   3e-099
TAIR9_protein||AT2G21350.1 | Symbols:  | RNA binding | chr2:9136...    170   2e-042

>TAIR9_protein||AT4G39040.1 | Symbols:  | RNA binding | chr4:18189249-18190535
        REVERSE

          Length = 297

 Score =  397 bits (1019), Expect = 7e-111
 Identities = 213/291 (73%), Positives = 239/291 (82%), Gaps = 17/291 (5%)
 Frame = +3

Query:  57 SSTHLIHNLLRHPEPPSSFCLFIRPFRFSAVTCQSSRCNKPRFQSISSKPPLPFHSTSSS 236
           SSTHLIHNLLRHP+PPS  CLF+RPF FSA   QS+  NKPRFQS SSK PLP H    S
Sbjct:  11 SSTHLIHNLLRHPKPPSPVCLFLRPFCFSASVSQSNHRNKPRFQSFSSK-PLPCH----S 65

Query: 237 SSLVAKSFSAIDEPDLLGEEDESEEDDYN------EEEDEEEELDSGMVSARGSEEDYEE 398
           +SLV KSFS+IDEPD L E++ESE++D++      E+E+EE+E DSG+V +    ED E 
Sbjct:  66 ASLVVKSFSSIDEPD-LEEDEESEDEDFSAEEYEYEDEEEEDEQDSGVVVSERGIEDSEA 124

Query: 399 G-----LGDKEEDKIEKMKKKARGSGLKLTIKEKKELASYAHSLGDKLKCQLVGKSGVTD 563
                 +GDKEE      KKK+RGS LKL+IKEKKELASYAHSLGDKLKCQLVGKSGVTD
Sbjct: 125 SEEVSEIGDKEEKTENTKKKKSRGSALKLSIKEKKELASYAHSLGDKLKCQLVGKSGVTD 184

Query: 564 SVVFSFLETLEKNELLKVKIRKTSPEEMEDAVMHLEEATGSVAVGQIGRTVILYRPSPPK 743
           SVVFSFLETLEKNELLKVKIRKTSP+E+EDAV HLEEATGSVAVGQIGRTVILYRPSP K
Sbjct: 185 SVVFSFLETLEKNELLKVKIRKTSPDELEDAVQHLEEATGSVAVGQIGRTVILYRPSPTK 244

Query: 744 MKAEEKKKEVERLLIRRRQKFSNSRPPRPFRREYSERPDGRGRRGGSRVAT 896
           MKAE KKKEVER+ I RRQK++N+RP +PFRREYSERPDGRGRRGGSRV T
Sbjct: 245 MKAEAKKKEVERMSITRRQKYANTRPTKPFRREYSERPDGRGRRGGSRVPT 295

>TAIR9_protein||AT4G39040.2 | Symbols:  | RNA binding | chr4:18189292-18190535
        REVERSE

          Length = 281

 Score =  359 bits (919), Expect = 3e-099
 Identities = 194/271 (71%), Positives = 220/271 (81%), Gaps = 17/271 (6%)
 Frame = +3

Query:  57 SSTHLIHNLLRHPEPPSSFCLFIRPFRFSAVTCQSSRCNKPRFQSISSKPPLPFHSTSSS 236
           SSTHLIHNLLRHP+PPS  CLF+RPF FSA   QS+  NKPRFQS SSK PLP H    S
Sbjct:  11 SSTHLIHNLLRHPKPPSPVCLFLRPFCFSASVSQSNHRNKPRFQSFSSK-PLPCH----S 65

Query: 237 SSLVAKSFSAIDEPDLLGEEDESEEDDYN------EEEDEEEELDSGMVSARGSEEDYEE 398
           +SLV KSFS+IDEPD L E++ESE++D++      E+E+EE+E DSG+V +    ED E 
Sbjct:  66 ASLVVKSFSSIDEPD-LEEDEESEDEDFSAEEYEYEDEEEEDEQDSGVVVSERGIEDSEA 124

Query: 399 G-----LGDKEEDKIEKMKKKARGSGLKLTIKEKKELASYAHSLGDKLKCQLVGKSGVTD 563
                 +GDKEE      KKK+RGS LKL+IKEKKELASYAHSLGDKLKCQLVGKSGVTD
Sbjct: 125 SEEVSEIGDKEEKTENTKKKKSRGSALKLSIKEKKELASYAHSLGDKLKCQLVGKSGVTD 184

Query: 564 SVVFSFLETLEKNELLKVKIRKTSPEEMEDAVMHLEEATGSVAVGQIGRTVILYRPSPPK 743
           SVVFSFLETLEKNELLKVKIRKTSP+E+EDAV HLEEATGSVAVGQIGRTVILYRPSP K
Sbjct: 185 SVVFSFLETLEKNELLKVKIRKTSPDELEDAVQHLEEATGSVAVGQIGRTVILYRPSPTK 244

Query: 744 MKAEEKKKEVERLLIRRRQKFSNSRPPRPFR 836
           MKAE KKKEVER+ I RRQK++N+RP +PFR
Sbjct: 245 MKAEAKKKEVERMSITRRQKYANTRPTKPFR 275

>TAIR9_protein||AT2G21350.1 | Symbols:  | RNA binding | chr2:9136451-9137267
        REVERSE

          Length = 223

 Score =  170 bits (429), Expect = 2e-042
 Identities = 89/148 (60%), Positives = 109/148 (73%)
 Frame = +3

Query: 333 DEEEELDSGMVSARGSEEDYEEGLGDKEEDKIEKMKKKARGSGLKLTIKEKKELASYAHS 512
           DE E+ +  +       E  ++G  D  E  +  M++  R S L+L+ KEK++LASYAH 
Sbjct:  74 DESEQDEDNVSLVASLNEINDDGQEDGSELTMVSMRENRRSSALELSAKEKRKLASYAHH 133

Query: 513 LGDKLKCQLVGKSGVTDSVVFSFLETLEKNELLKVKIRKTSPEEMEDAVMHLEEATGSVA 692
           LGDKLK QLVGKSGVTDSVV SF+ETLEKNELLKVKI +T P E+ED ++ LEEATGSV+
Sbjct: 134 LGDKLKSQLVGKSGVTDSVVLSFVETLEKNELLKVKIHRTCPGELEDMILRLEEATGSVS 193

Query: 693 VGQIGRTVILYRPSPPKMKAEEKKKEVE 776
           VGQI RTVILYRPSP K+KA+E KK  E
Sbjct: 194 VGQIARTVILYRPSPTKLKADEDKKRNE 221


 Score =  67 bits (161), Expect = 2e-011
 Identities = 51/128 (39%), Positives = 69/128 (53%), Gaps = 8/128 (6%)
 Frame = +3

Query:  51 TSSSTHLIHNLLRHPEPPSSFCLFIRPFRFSAVTCQSSRCNKPRFQSISSKPPLPFHSTS 230
           +S+ T+LIH+LLRH +P S  CLF+RPF  S +  +SS         ISS  PLP    S
Sbjct:   6 SSTLTNLIHHLLRHRKPTSPVCLFLRPFSVSLLGRKSS-----HHAWISSSLPLPRPYIS 60

Query: 231 SSSSLVAKSFSAIDEPDLLGEEDESEEDDYNEEEDEEEELDS--GMVSARGSEEDYEEGL 404
            S  LV KSFS++DE +   E++ S     NE  D+ +E  S   MVS R +       L
Sbjct:  61 FSPLLVPKSFSSVDESE-QDEDNVSLVASLNEINDDGQEDGSELTMVSMRENRRSSALEL 119

Query: 405 GDKEEDKI 428
             KE+ K+
Sbjct: 120 SAKEKRKL 127

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,001,557,611
Number of Sequences: 33410
Number of Extensions: 12001557611
Number of Successful Extensions: 381315744
Number of sequences better than 0.0: 0