Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN23229


BLASTX 7.6.2

Query= UN23229 /QuerySize=635
        (634 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT1G70600.1 | Symbols:  | structural constituent ...    302   1e-082
TAIR9_protein||AT1G23290.1 | Symbols: RPL27A, RPL27AB | RPL27AB;...    298   2e-081
TAIR9_protein||AT1G12960.1 | Symbols:  | 60S ribosomal protein L...     64   9e-011

>TAIR9_protein||AT1G70600.1 | Symbols:  | structural constituent of ribosome |
        chr1:26621168-26621608 REVERSE

          Length = 147

 Score =  302 bits (773), Expect = 1e-082
 Identities = 142/147 (96%), Positives = 144/147 (97%)
 Frame = -2

Query: 594 MTTRLRKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 415
           MTTR +KNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct:   1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 414 FHKLRNKFFCPIVNLDRLWSLVPEDVKAKSTKDKVPLIDVTQHGFFKVLGKGHLPENKPF 235
           FHKLRNKFFCPIVNLD+LWSLVPEDVKAKSTKD VPLIDVTQHGFFKVLGKGHLPENKPF
Sbjct:  61 FHKLRNKFFCPIVNLDKLWSLVPEDVKAKSTKDNVPLIDVTQHGFFKVLGKGHLPENKPF 120

Query: 234 VVKAKLISKTAEKKIKEAGGAVVLTA* 154
           VVKAKLISKTAEKKIKEAGGAVVLTA*
Sbjct: 121 VVKAKLISKTAEKKIKEAGGAVVLTA* 147

>TAIR9_protein||AT1G23290.1 | Symbols: RPL27A, RPL27AB | RPL27AB; structural
        constituent of ribosome | chr1:8263007-8263447 FORWARD

          Length = 147

 Score =  298 bits (762), Expect = 2e-081
 Identities = 140/147 (95%), Positives = 143/147 (97%)
 Frame = -2

Query: 594 MTTRLRKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 415
           M T L+KNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct:   1 MATALKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 414 FHKLRNKFFCPIVNLDRLWSLVPEDVKAKSTKDKVPLIDVTQHGFFKVLGKGHLPENKPF 235
           FHKLRNKFFCPIVNLD+LWSLVPEDVKAKS+KD VPLIDVTQHGFFKVLGKGHLPENKPF
Sbjct:  61 FHKLRNKFFCPIVNLDKLWSLVPEDVKAKSSKDNVPLIDVTQHGFFKVLGKGHLPENKPF 120

Query: 234 VVKAKLISKTAEKKIKEAGGAVVLTA* 154
           VVKAKLISKTAEKKIKEAGGAVVLTA*
Sbjct: 121 VVKAKLISKTAEKKIKEAGGAVVLTA* 147

>TAIR9_protein||AT1G12960.1 | Symbols:  | 60S ribosomal protein L27A (RPL27aA) |
        chr1:4422707-4423155 REVERSE

          Length = 105

 Score =  64 bits (153), Expect = 9e-011
 Identities = 32/38 (84%), Positives = 33/38 (86%)
 Frame = -2

Query: 273 VLGKGHLPENKPFVVKAKLISKTAEKKIKEAGGAVVLT 160
           VLGKG LPENKP VVKAKL+S T EKKIKEAG AVVLT
Sbjct:  63 VLGKGFLPENKPVVVKAKLVSNTDEKKIKEAGSAVVLT 100


 Score =  59 bits (141), Expect = 2e-009
 Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
 Frame = -2

Query: 594 MTTRLRKNRKKRGHVSAGHGRIGKHRKHPGGRGNAG-GMHHHRILFDKYH 448
           MTT  +K R  R HVS GHGR GKHRK PG RGNAG GM +   L +K++
Sbjct:   1 MTTSRKKTRNLREHVSVGHGRFGKHRKLPGSRGNAGVGMRYFHKLRNKFY 50


 Score =  57 bits (135), Expect = 1e-008
 Identities = 26/35 (74%), Positives = 29/35 (82%), Gaps = 2/35 (5%)
 Frame = -2

Query: 447 PGYFGK--VGMRYFHKLRNKFFCPIVNLDRLWSLV 349
           PG  G   VGMRYFHKLRNKF+C IVNLD+LWS+V
Sbjct:  29 PGSRGNAGVGMRYFHKLRNKFYCQIVNLDKLWSMV 63

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,001,557,611
Number of Sequences: 33410
Number of Extensions: 12001557611
Number of Successful Extensions: 381315744
Number of sequences better than 0.0: 0