BLASTX 7.6.2
Query= UN23229 /QuerySize=635
(634 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G70600.1 | Symbols: | structural constituent ... 302 1e-082
TAIR9_protein||AT1G23290.1 | Symbols: RPL27A, RPL27AB | RPL27AB;... 298 2e-081
TAIR9_protein||AT1G12960.1 | Symbols: | 60S ribosomal protein L... 64 9e-011
>TAIR9_protein||AT1G70600.1 | Symbols: | structural constituent of ribosome |
chr1:26621168-26621608 REVERSE
Length = 147
Score = 302 bits (773), Expect = 1e-082
Identities = 142/147 (96%), Positives = 144/147 (97%)
Frame = -2
Query: 594 MTTRLRKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 415
MTTR +KNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
Query: 414 FHKLRNKFFCPIVNLDRLWSLVPEDVKAKSTKDKVPLIDVTQHGFFKVLGKGHLPENKPF 235
FHKLRNKFFCPIVNLD+LWSLVPEDVKAKSTKD VPLIDVTQHGFFKVLGKGHLPENKPF
Sbjct: 61 FHKLRNKFFCPIVNLDKLWSLVPEDVKAKSTKDNVPLIDVTQHGFFKVLGKGHLPENKPF 120
Query: 234 VVKAKLISKTAEKKIKEAGGAVVLTA* 154
VVKAKLISKTAEKKIKEAGGAVVLTA*
Sbjct: 121 VVKAKLISKTAEKKIKEAGGAVVLTA* 147
>TAIR9_protein||AT1G23290.1 | Symbols: RPL27A, RPL27AB | RPL27AB; structural
constituent of ribosome | chr1:8263007-8263447 FORWARD
Length = 147
Score = 298 bits (762), Expect = 2e-081
Identities = 140/147 (95%), Positives = 143/147 (97%)
Frame = -2
Query: 594 MTTRLRKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 415
M T L+KNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1 MATALKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
Query: 414 FHKLRNKFFCPIVNLDRLWSLVPEDVKAKSTKDKVPLIDVTQHGFFKVLGKGHLPENKPF 235
FHKLRNKFFCPIVNLD+LWSLVPEDVKAKS+KD VPLIDVTQHGFFKVLGKGHLPENKPF
Sbjct: 61 FHKLRNKFFCPIVNLDKLWSLVPEDVKAKSSKDNVPLIDVTQHGFFKVLGKGHLPENKPF 120
Query: 234 VVKAKLISKTAEKKIKEAGGAVVLTA* 154
VVKAKLISKTAEKKIKEAGGAVVLTA*
Sbjct: 121 VVKAKLISKTAEKKIKEAGGAVVLTA* 147
>TAIR9_protein||AT1G12960.1 | Symbols: | 60S ribosomal protein L27A (RPL27aA) |
chr1:4422707-4423155 REVERSE
Length = 105
Score = 64 bits (153), Expect = 9e-011
Identities = 32/38 (84%), Positives = 33/38 (86%)
Frame = -2
Query: 273 VLGKGHLPENKPFVVKAKLISKTAEKKIKEAGGAVVLT 160
VLGKG LPENKP VVKAKL+S T EKKIKEAG AVVLT
Sbjct: 63 VLGKGFLPENKPVVVKAKLVSNTDEKKIKEAGSAVVLT 100
Score = 59 bits (141), Expect = 2e-009
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = -2
Query: 594 MTTRLRKNRKKRGHVSAGHGRIGKHRKHPGGRGNAG-GMHHHRILFDKYH 448
MTT +K R R HVS GHGR GKHRK PG RGNAG GM + L +K++
Sbjct: 1 MTTSRKKTRNLREHVSVGHGRFGKHRKLPGSRGNAGVGMRYFHKLRNKFY 50
Score = 57 bits (135), Expect = 1e-008
Identities = 26/35 (74%), Positives = 29/35 (82%), Gaps = 2/35 (5%)
Frame = -2
Query: 447 PGYFGK--VGMRYFHKLRNKFFCPIVNLDRLWSLV 349
PG G VGMRYFHKLRNKF+C IVNLD+LWS+V
Sbjct: 29 PGSRGNAGVGMRYFHKLRNKFYCQIVNLDKLWSMV 63
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,001,557,611
Number of Sequences: 33410
Number of Extensions: 12001557611
Number of Successful Extensions: 381315744
Number of sequences better than 0.0: 0
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