BLASTX 7.6.2
Query= UN23253 /QuerySize=1025
(1024 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G34430.1 | Symbols: LHB1B1, LHCB1.4 | LHB1B1; ... 529 1e-150
TAIR9_protein||AT1G29930.1 | Symbols: CAB1, AB140, CAB140, LHCB1... 522 1e-148
TAIR9_protein||AT1G29910.1 | Symbols: CAB3, AB180, LHCB1.2 | CAB... 520 5e-148
TAIR9_protein||AT1G29920.1 | Symbols: CAB2, AB165, LHCB1.1 | CAB... 520 5e-148
TAIR9_protein||AT2G34420.1 | Symbols: LHB1B2, LHCB1.5 | LHB1B2; ... 515 3e-146
TAIR9_protein||AT2G05070.1 | Symbols: LHCB2.2, LHCB2 | LHCB2.2; ... 414 5e-116
TAIR9_protein||AT2G05100.1 | Symbols: LHCB2.1, LHCB2 | LHCB2.1; ... 410 8e-115
TAIR9_protein||AT3G27690.1 | Symbols: LHCB2.4, LHCB2.3, LHCB2 | ... 409 2e-114
TAIR9_protein||AT5G54270.1 | Symbols: LHCB3, LHCB3*1 | LHCB3 (LI... 343 2e-094
TAIR9_protein||AT4G10340.1 | Symbols: LHCB5 | LHCB5 (LIGHT HARVE... 204 1e-052
TAIR9_protein||AT1G76570.1 | Symbols: | chlorophyll A-B binding... 193 2e-049
TAIR9_protein||AT3G61470.1 | Symbols: LHCA2 | LHCA2; chlorophyll... 140 2e-033
TAIR9_protein||AT1G45474.1 | Symbols: LHCA5 | LHCA5; pigment bin... 135 6e-032
TAIR9_protein||AT1G45474.2 | Symbols: LHCA5 | LHCA5; pigment bin... 135 6e-032
TAIR9_protein||AT5G01530.1 | Symbols: | chlorophyll A-B binding... 111 8e-025
TAIR9_protein||AT3G08940.2 | Symbols: LHCB4.2 | LHCB4.2 (light h... 109 4e-024
TAIR9_protein||AT1G61520.1 | Symbols: LHCA3 | LHCA3; chlorophyll... 91 8e-019
TAIR9_protein||AT1G61520.2 | Symbols: LHCA3 | LHCA3; chlorophyll... 91 8e-019
>TAIR9_protein||AT2G34430.1 | Symbols: LHB1B1, LHCB1.4 | LHB1B1; chlorophyll
binding | chr2:14524818-14525618 FORWARD
Length = 267
Score = 529 bits (1362), Expect = 1e-150
Identities = 256/267 (95%), Positives = 260/267 (97%)
Frame = -2
Query: 963 MAASTMALSSPAFAGKAVKLSPGASEVFGTGRVTMRKTVKPTGPSGSPWYGSDRVKYLGP 784
MAASTMALSSPA GKAVKLSP ASEVFGTGR+TMRK KPTGPSGSPWYGSDRVKYLGP
Sbjct: 1 MAASTMALSSPALTGKAVKLSPAASEVFGTGRITMRKASKPTGPSGSPWYGSDRVKYLGP 60
Query: 783 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLAR 604
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 61 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLAR 120
Query: 603 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGEG 424
NGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG+G
Sbjct: 121 NGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDG 180
Query: 423 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 244
PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240
Query: 243 ENLADHLADPVNNNAWAFATNFVPGK* 163
ENLADHLADPVNNNAWAFATNFVPGK*
Sbjct: 241 ENLADHLADPVNNNAWAFATNFVPGK* 267
>TAIR9_protein||AT1G29930.1 | Symbols: CAB1, AB140, CAB140, LHCB1.3 | CAB1
(CHLOROPHYLL A/B BINDING PROTEIN 1); chlorophyll binding |
chr1:10478071-10478874 FORWARD
Length = 268
Score = 522 bits (1344), Expect = 1e-148
Identities = 256/268 (95%), Positives = 260/268 (97%), Gaps = 1/268 (0%)
Frame = -2
Query: 963 MAASTMALSSPAFAGKAVKLSPGASEVFGTGRVTMRKTV-KPTGPSGSPWYGSDRVKYLG 787
MAASTMALSSPAFAGKAVKLSP ASEV G+GRVTMRKTV KP GPSGSPWYGSDRVKYLG
Sbjct: 1 MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60
Query: 786 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLA 607
PFSGE PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIH RWAMLGALGCVFPELLA
Sbjct: 61 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120
Query: 606 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGE 427
RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180
Query: 426 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 247
GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 246 LENLADHLADPVNNNAWAFATNFVPGK* 163
+ENLADHLADPVNNNAWAFATNFVPGK*
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK* 268
>TAIR9_protein||AT1G29910.1 | Symbols: CAB3, AB180, LHCB1.2 | CAB3 (CHLOROPHYLL
A/B BINDING PROTEIN 3); chlorophyll binding | chr1:10472443-10473246
REVERSE
Length = 268
Score = 520 bits (1339), Expect = 5e-148
Identities = 255/268 (95%), Positives = 259/268 (96%), Gaps = 1/268 (0%)
Frame = -2
Query: 963 MAASTMALSSPAFAGKAVKLSPGASEVFGTGRVTMRKTV-KPTGPSGSPWYGSDRVKYLG 787
MAASTMALSSPAFAGKAV LSP ASEV G+GRVTMRKTV KP GPSGSPWYGSDRVKYLG
Sbjct: 1 MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60
Query: 786 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLA 607
PFSGE PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIH RWAMLGALGCVFPELLA
Sbjct: 61 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120
Query: 606 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGE 427
RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180
Query: 426 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 247
GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 246 LENLADHLADPVNNNAWAFATNFVPGK* 163
+ENLADHLADPVNNNAWAFATNFVPGK*
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK* 268
>TAIR9_protein||AT1G29920.1 | Symbols: CAB2, AB165, LHCB1.1 | CAB2 (CHLOROPHYLL
A/B-BINDING PROTEIN 2); chlorophyll binding | chr1:10475089-10475892
REVERSE
Length = 268
Score = 520 bits (1339), Expect = 5e-148
Identities = 255/268 (95%), Positives = 259/268 (96%), Gaps = 1/268 (0%)
Frame = -2
Query: 963 MAASTMALSSPAFAGKAVKLSPGASEVFGTGRVTMRKTV-KPTGPSGSPWYGSDRVKYLG 787
MAASTMALSSPAFAGKAV LSP ASEV G+GRVTMRKTV KP GPSGSPWYGSDRVKYLG
Sbjct: 1 MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60
Query: 786 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLA 607
PFSGE PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIH RWAMLGALGCVFPELLA
Sbjct: 61 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120
Query: 606 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGE 427
RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180
Query: 426 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 247
GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 246 LENLADHLADPVNNNAWAFATNFVPGK* 163
+ENLADHLADPVNNNAWAFATNFVPGK*
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK* 268
>TAIR9_protein||AT2G34420.1 | Symbols: LHB1B2, LHCB1.5 | LHB1B2; chlorophyll
binding | chr2:14522716-14523513 REVERSE
Length = 266
Score = 515 bits (1324), Expect = 3e-146
Identities = 253/267 (94%), Positives = 259/267 (97%), Gaps = 3/267 (1%)
Frame = -2
Query: 960 AASTMALSSPAFAGKAVKLSPGASEVFGTGRVTMRKTV-KPTGPSGSPWYGSDRVKYLGP 784
A+STMALSSPAFAGKAVK P AS+V G+GRVTMRKTV KP GPSGSPWYGSDRVKYLGP
Sbjct: 2 ASSTMALSSPAFAGKAVK--PAASDVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGP 59
Query: 783 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLAR 604
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLAR 119
Query: 603 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGEG 424
NGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG+G
Sbjct: 120 NGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDG 179
Query: 423 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 244
PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 180 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 239
Query: 243 ENLADHLADPVNNNAWAFATNFVPGK* 163
ENLADHLADPVNNNAWAFATNFVPGK*
Sbjct: 240 ENLADHLADPVNNNAWAFATNFVPGK* 266
>TAIR9_protein||AT2G05070.1 | Symbols: LHCB2.2, LHCB2 | LHCB2.2; chlorophyll
binding | chr2:1799436-1800329 REVERSE
Length = 266
Score = 414 bits (1063), Expect = 5e-116
Identities = 204/269 (75%), Positives = 226/269 (84%), Gaps = 9/269 (3%)
Frame = -2
Query: 954 STMALSSPAFAGKAVKLSPGAS-----EVFGTGRVTMRKTVKPTGPSGSPWYGSDRVKYL 790
+T A+ +FAG+ L P + V G GRVTMR+TVK T S WYG DR KYL
Sbjct: 2 ATSAIQQSSFAGQTA-LKPSSDLIQKVGVLGGGRVTMRRTVKST--PQSIWYGPDRPKYL 58
Query: 789 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELL 610
GPFS PSYLTGE+PGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGC FPE+L
Sbjct: 59 GPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEIL 118
Query: 609 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 430
++NGVKFGEAVWFKAGSQIFSEGGLDYLGNP+L+HAQSILAIWA QV+LMG +EGYR+ G
Sbjct: 119 SKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGG 178
Query: 429 EGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 250
GPLGE D LYPGG+FDPL LA DPEAF+ELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 179 -GPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKG 237
Query: 249 PLENLADHLADPVNNNAWAFATNFVPGK* 163
P+ENL DHLADPV NNAW++ATNFVPGK*
Sbjct: 238 PIENLFDHLADPVANNAWSYATNFVPGK* 266
>TAIR9_protein||AT2G05100.1 | Symbols: LHCB2.1, LHCB2 | LHCB2.1; chlorophyll
binding | chr2:1823449-1824331 REVERSE
Length = 266
Score = 410 bits (1053), Expect = 8e-115
Identities = 203/269 (75%), Positives = 224/269 (83%), Gaps = 9/269 (3%)
Frame = -2
Query: 954 STMALSSPAFAGKAVKLSPGAS-----EVFGTGRVTMRKTVKPTGPSGSPWYGSDRVKYL 790
+T A+ +FAG+ L P V G GRVTMR+TVK T S WYG DR KYL
Sbjct: 2 ATSAIQQSSFAGQTA-LKPSNELLRKVGVSGGGRVTMRRTVKST--PQSIWYGPDRPKYL 58
Query: 789 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELL 610
GPFS PSYLTGE+PGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGC FPE+L
Sbjct: 59 GPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEIL 118
Query: 609 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 430
++NGVKFGEAVWFKAGSQIFSEGGLDYLGNP+L+HAQSILAIWA QV+LMG +EGYR+ G
Sbjct: 119 SKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGG 178
Query: 429 EGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 250
GPLGE D LYPGG+FDPL LA DPEAF+ELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 179 -GPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKG 237
Query: 249 PLENLADHLADPVNNNAWAFATNFVPGK* 163
P+ENL DHLADPV NNAW++ATNFVPG *
Sbjct: 238 PIENLFDHLADPVANNAWSYATNFVPGN* 266
>TAIR9_protein||AT3G27690.1 | Symbols: LHCB2.4, LHCB2.3, LHCB2 | LHCB2.3;
chlorophyll binding | chr3:10256002-10256921 FORWARD
Length = 267
Score = 409 bits (1050), Expect = 2e-114
Identities = 204/272 (75%), Positives = 226/272 (83%), Gaps = 14/272 (5%)
Frame = -2
Query: 954 STMALSSPAFAGKAVKLSP--------GASEVFGTGRVTMRKTVKPTGPSGSPWYGSDRV 799
+T A+ +FAG+ L P GAS G GR+ MR+TVK T S WYG DR
Sbjct: 2 ATSAIQHSSFAGQTT-LKPSNDLLRKIGASN--GGGRIIMRRTVKST--PQSIWYGPDRP 56
Query: 798 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFP 619
KYLGPFS PSYLTGE+PGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGC FP
Sbjct: 57 KYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFP 116
Query: 618 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR 439
E+L++NGVKFGEAVWFKAGSQIFSEGGLDYLGNP+L+HAQSILAIWA QV+LMG +EGYR
Sbjct: 117 EILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFIEGYR 176
Query: 438 VAGEGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT 259
+ G GPLGE D LYPGG+FDPL LA DPEAF+ELKVKE+KNGRLAMFSMFGFFVQAIVT
Sbjct: 177 IGG-GPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVT 235
Query: 258 GKGPLENLADHLADPVNNNAWAFATNFVPGK* 163
GKGP+ENL DH+ADPV NNAWA+ATNFVPGK*
Sbjct: 236 GKGPIENLFDHIADPVANNAWAYATNFVPGK* 267
>TAIR9_protein||AT5G54270.1 | Symbols: LHCB3, LHCB3*1 | LHCB3 (LIGHT-HARVESTING
CHLOROPHYLL B-BINDING PROTEIN 3); structural molecule |
chr5:22038424-22039383 FORWARD
Length = 266
Score = 343 bits (878), Expect = 2e-094
Identities = 172/219 (78%), Positives = 183/219 (83%), Gaps = 3/219 (1%)
Frame = -2
Query: 819 WYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLG 640
WYG DRVKYLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLG
Sbjct: 47 WYGPDRVKYLGPFSVQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLG 106
Query: 639 ALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVIL 463
A GC+ PE+L + V F E VWFKAGSQIFSEGGLDYLGNP+LVHAQSILA+ QVIL
Sbjct: 107 AFGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVIL 166
Query: 462 MGAVEGYRVAGEGPLGEAEDLLYPGGS-FDPLGLATDPEAFAELKVKEIKNGRLAMFSMF 286
MG VEG+R+ G +GE D LYPGG FDPLGLA DP FAELKVKEIKNGRLAMFSMF
Sbjct: 167 MGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 225
Query: 285 GFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 169
GFFVQAIVTGKGPLENL DHL +PV NNAWAFAT F PG
Sbjct: 226 GFFVQAIVTGKGPLENLLDHLDNPVANNAWAFATKFAPG 264
>TAIR9_protein||AT4G10340.1 | Symbols: LHCB5 | LHCB5 (LIGHT HARVESTING COMPLEX
OF PHOTOSYSTEM II 5); chlorophyll binding | chr4:6408200-6409496
FORWARD
Length = 281
Score = 204 bits (517), Expect = 1e-052
Identities = 113/222 (50%), Positives = 138/222 (62%), Gaps = 10/222 (4%)
Frame = -2
Query: 855 KTVKPTGPSGSPWYGSDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAR 685
K V T + WYG DR +L E P YL GE GDYG+D GL PE FA+
Sbjct: 50 KAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAK 109
Query: 684 NRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLV 508
+ E+IH RWAMLGA G + PE L + G G EAVWFK G+ + L+Y G +
Sbjct: 110 YQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKN--I 167
Query: 507 HAQSILAIWATQVILMGAVEGYRVAGEGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKV 328
+LA+ A +V+L+G E YR+ + ED L+PGG FDPLGLA DPE A LKV
Sbjct: 168 PINLVLAVVA-EVVLLGGAEYYRITNG---LDFEDKLHPGGPFDPLGLAKDPEQGALLKV 223
Query: 327 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 202
KEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 224 KEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNN 265
>TAIR9_protein||AT1G76570.1 | Symbols: | chlorophyll A-B binding family protein
| chr1:28729132-28730754 FORWARD
Length = 328
Score = 193 bits (489), Expect = 2e-049
Identities = 105/217 (48%), Positives = 134/217 (61%), Gaps = 9/217 (4%)
Frame = -2
Query: 825 SPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAM 646
S WYG +R ++ GP + P YLTGE PGDYG+D AGL D TF + E++H RWAM
Sbjct: 104 SKWYGKERPRWFGPIPYDYPPYLTGELPGDYGFDIAGLGKDRLTFDKYFNFEILHARWAM 163
Query: 645 LGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSL--VHAQSILAIWAT 475
L ALG + PE+ G F E VW++ G L+YLG P L +Q ++ I
Sbjct: 164 LAALGALIPEVFDLTGTFHFAEPVWWRVGYSKLQGETLEYLGIPGLHVAGSQGVIVIAIC 223
Query: 474 QVILMGAVEGYRVAG---EGPLG--EAEDLLYPGGS-FDPLGLATDPEAFAELKVKEIKN 313
QV+LM E R G PLG D+ YPGG+ FDPL L+ DP AF +LKVKEIKN
Sbjct: 224 QVLLMVGPEYARYCGIEALEPLGIYLPGDINYPGGTLFDPLNLSEDPVAFEDLKVKEIKN 283
Query: 312 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 202
GRLAM + GF+ QA TGKGP++NL DH++DP++NN
Sbjct: 284 GRLAMVAWLGFYAQAAFTGKGPVQNLVDHVSDPLHNN 320
>TAIR9_protein||AT3G61470.1 | Symbols: LHCA2 | LHCA2; chlorophyll binding |
chr3:22745736-22747032 FORWARD
Length = 258
Score = 140 bits (351), Expect = 2e-033
Identities = 97/263 (36%), Positives = 135/263 (51%), Gaps = 29/263 (11%)
Frame = -2
Query: 945 ALSSPAF-AGKAVKLSPGASEVFGTGRVTMRKTVKPTGPSGSPWYGSDRVKYLGPFSGE- 772
A+SSP+F GK ++L ++T+ +P + DR + F G
Sbjct: 13 AISSPSFLGGKKLRLKK---------KLTVPAVSRPDASVRAVAADPDRPIW---FPGST 60
Query: 771 PPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVK 592
PP +L G PGD+G+D GLS+DP++ N + E++HCRWAMLGA G PE L + G+
Sbjct: 61 PPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFLTKIGI- 119
Query: 591 FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA-----TQVILMGAVEGYRVAGE 427
W+ AG Q + + +L + IL WA +I G+V V
Sbjct: 120 LNTPSWYTAGEQEY------FTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDPVFPN 173
Query: 426 GPLGEAEDLLYPGGS-FDPLGLAT-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 253
L D+ YPGG FDPLG + P EL+ KEIKNGRLAM ++ G + Q I TG
Sbjct: 174 NKL-TGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGT 232
Query: 252 GPLENLADHLADPVNNNAWAFAT 184
GP++NL HLADP + +A T
Sbjct: 233 GPIDNLFAHLADPGHATIFAAFT 255
>TAIR9_protein||AT1G45474.1 | Symbols: LHCA5 | LHCA5; pigment binding |
chr1:17179353-17180439 FORWARD
Length = 257
Score = 135 bits (338), Expect = 6e-032
Identities = 86/221 (38%), Positives = 120/221 (54%), Gaps = 16/221 (7%)
Frame = -2
Query: 852 TVKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNREL 673
+VK G +P +R +L + PP YL G GDYG+D GL DPE+ +
Sbjct: 30 SVKAAGGGINPTVAVERATWLPGLN--PPPYLDGNLAGDYGFDPLGLGEDPESLKWYVQA 87
Query: 672 EVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSI 493
E++H R+AMLG G +F +LL G++ VW++AG+ F D+ +L+ Q +
Sbjct: 88 ELVHSRFAMLGVAGILFTDLLRTTGIR-NLPVWYEAGAVKF-----DFASTKTLIVVQFL 141
Query: 492 LAIWATQVILMGAVEGYRVAGEGPLG-------EAEDLLYPGGS-FDPLGLATDPEAFAE 337
L +A M V A EG E + YPGG +PLGLA D + +
Sbjct: 142 LMGFAETKRYMDFVSPGSQAKEGSFFFGLEAALEGLEPGYPGGPLLNPLGLAKDVQNAHD 201
Query: 336 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 214
K+KEIKNGRLAM +M GFFVQA VT GP++NL +HL++P
Sbjct: 202 WKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNP 242
>TAIR9_protein||AT1G45474.2 | Symbols: LHCA5 | LHCA5; pigment binding |
chr1:17179353-17180439 FORWARD
Length = 257
Score = 135 bits (338), Expect = 6e-032
Identities = 86/221 (38%), Positives = 120/221 (54%), Gaps = 16/221 (7%)
Frame = -2
Query: 852 TVKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNREL 673
+VK G +P +R +L + PP YL G GDYG+D GL DPE+ +
Sbjct: 30 SVKAAGGGINPTVAVERATWLPGLN--PPPYLDGNLAGDYGFDPLGLGEDPESLKWYVQA 87
Query: 672 EVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSI 493
E++H R+AMLG G +F +LL G++ VW++AG+ F D+ +L+ Q +
Sbjct: 88 ELVHSRFAMLGVAGILFTDLLRTTGIR-NLPVWYEAGAVKF-----DFASTKTLIVVQFL 141
Query: 492 LAIWATQVILMGAVEGYRVAGEGPLG-------EAEDLLYPGGS-FDPLGLATDPEAFAE 337
L +A M V A EG E + YPGG +PLGLA D + +
Sbjct: 142 LMGFAETKRYMDFVSPGSQAKEGSFFFGLEAALEGLEPGYPGGPLLNPLGLAKDVQNAHD 201
Query: 336 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 214
K+KEIKNGRLAM +M GFFVQA VT GP++NL +HL++P
Sbjct: 202 WKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNP 242
>TAIR9_protein||AT5G01530.1 | Symbols: | chlorophyll A-B binding protein CP29
(LHCB4) | chr5:209084-210243 FORWARD
Length = 291
Score = 111 bits (277), Expect = 8e-025
Identities = 74/161 (45%), Positives = 94/161 (58%), Gaps = 16/161 (9%)
Frame = -2
Query: 687 RNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 508
R RE E+IH RWAML LG + E L GV W AG +G YLG P
Sbjct: 135 RFRECELIHGRWAMLATLGALSVEWL--TGV-----TWQDAGKVELVDGS-SYLGQPLPF 186
Query: 507 HAQSILAIWATQVILMGAVEGYRVAGEGPLGEAEDLLYPGGS-FDPLGLATDPEAFAELK 331
++ IW +V+++G +E R A ++E LYPGG FDPLGLA DPE A+L+
Sbjct: 187 SISTL--IW-IEVLVIGYIEFQRNAEL----DSEKRLYPGGKFFDPLGLAADPEKTAQLQ 239
Query: 330 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 208
+ EIK+ RLAM + GF VQA TGKGPL N A HL+DP++
Sbjct: 240 LAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 280
>TAIR9_protein||AT3G08940.2 | Symbols: LHCB4.2 | LHCB4.2 (light harvesting
complex PSII); chlorophyll binding | chr3:2717717-2718665 FORWARD
Length = 288
Score = 109 bits (271), Expect = 4e-024
Identities = 73/161 (45%), Positives = 93/161 (57%), Gaps = 16/161 (9%)
Frame = -2
Query: 687 RNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 508
R RE E+IH RWAML LG + E L GV W AG +G YLG P
Sbjct: 132 RFRECELIHGRWAMLATLGAITVEWL--TGV-----TWQDAGKVELVDGS-SYLGQPLPF 183
Query: 507 HAQSILAIWATQVILMGAVEGYRVAGEGPLGEAEDLLYPGGS-FDPLGLATDPEAFAELK 331
++ IW +V+++G +E R A ++E LYPGG FDPLGLA+DP A+L+
Sbjct: 184 SISTL--IW-IEVLVIGYIEFQRNAEL----DSEKRLYPGGKFFDPLGLASDPVKKAQLQ 236
Query: 330 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 208
+ EIK+ RLAM GF VQA TGKGPL N A HL+DP++
Sbjct: 237 LAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLH 277
>TAIR9_protein||AT1G61520.1 | Symbols: LHCA3 | LHCA3; chlorophyll binding |
chr1:22700152-22701149 FORWARD
Length = 274
Score = 91 bits (225), Expect = 8e-019
Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Frame = -2
Query: 396 YPGGS-FDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 220
YPGG F+PLG D ++ ELK+KE+KNGRLAM ++ G+F+Q +VTG GP +NL DHLA
Sbjct: 200 YPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLA 259
Query: 219 DPVNNN 202
DPVNNN
Sbjct: 260 DPVNNN 265
>TAIR9_protein||AT1G61520.2 | Symbols: LHCA3 | LHCA3; chlorophyll binding |
chr1:22700493-22701149 FORWARD
Length = 219
Score = 91 bits (225), Expect = 8e-019
Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Frame = -2
Query: 396 YPGGS-FDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 220
YPGG F+PLG D ++ ELK+KE+KNGRLAM ++ G+F+Q +VTG GP +NL DHLA
Sbjct: 145 YPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLA 204
Query: 219 DPVNNN 202
DPVNNN
Sbjct: 205 DPVNNN 210
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,001,557,611
Number of Sequences: 33410
Number of Extensions: 12001557611
Number of Successful Extensions: 381315744
Number of sequences better than 0.0: 0
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