BLASTX 7.6.2
Query= UN23256 /QuerySize=868
(867 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P46523|CLPA_BRANA ATP-dependent Clp protease ATP-binding subu... 409 2e-113
sp|P35100|CLPC_PEA ATP-dependent Clp protease ATP-binding subuni... 386 1e-106
sp|P31542|CLPAB_SOLLC ATP-dependent Clp protease ATP-binding sub... 383 9e-106
sp|P31541|CLPAA_SOLLC ATP-dependent Clp protease ATP-binding sub... 379 2e-104
sp|Q1XDF4|CLPC_PORYE ATP-dependent Clp protease ATP-binding subu... 307 8e-083
sp|P51332|CLPC_PORPU ATP-dependent Clp protease ATP-binding subu... 305 3e-082
sp|O78410|CLPC_GUITH ATP-dependent Clp protease ATP-binding subu... 299 2e-080
sp|Q9TM05|CLPC_CYACA ATP-dependent Clp protease ATP-binding subu... 289 3e-077
sp|P42762|ERD1_ARATH ERD1 protein, chloroplastic OS=Arabidopsis ... 216 1e-055
sp|Q8EU05|CLPB_OCEIH Chaperone protein clpB OS=Oceanobacillus ih... 209 2e-053
sp|Q2FJB5|CLPC_STAA3 ATP-dependent Clp protease ATP-binding subu... 197 1e-049
sp|Q2G0P5|CLPC_STAA8 ATP-dependent Clp protease ATP-binding subu... 197 1e-049
sp|Q2YSD6|CLPC_STAAB ATP-dependent Clp protease ATP-binding subu... 197 1e-049
sp|Q5HRM8|CLPC_STAEQ ATP-dependent Clp protease ATP-binding subu... 193 2e-048
sp|Q8CQ88|CLPC_STAES ATP-dependent Clp protease ATP-binding subu... 193 2e-048
sp|P24428|CLPC_MYCLE Probable ATP-dependent Clp protease ATP-bin... 192 3e-048
sp|Q4L3I4|CLPC_STAHJ ATP-dependent Clp protease ATP-binding subu... 192 3e-048
sp|P0A523|CLPC_MYCBO Probable ATP-dependent Clp protease ATP-bin... 191 5e-048
sp|P0A522|CLPC_MYCTU Probable ATP-dependent Clp protease ATP-bin... 191 5e-048
sp|O67588|CLPB_AQUAE Chaperone protein clpB OS=Aquifex aeolicus ... 190 1e-047
>sp|P46523|CLPA_BRANA ATP-dependent Clp protease ATP-binding subunit clpA
homolog, chloroplastic (Fragment) OS=Brassica napus GN=CLPA PE=2 SV=1
Length = 874
Score = 409 bits (1050), Expect = 2e-113
Identities = 211/219 (96%), Positives = 217/219 (99%), Gaps = 1/219 (0%)
Frame = +1
Query: 13 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 192
YTVVLFDEIEKAHPDVFNMMLQILEDGRLT+SKGRTVDFKNTLLIMTSNVGSSVIEKGGR
Sbjct: 657 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTNSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 716
Query: 193 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILL 372
RIGFDLDY EKDSSYNRIKSLVT+ELKQYFRPEFLNRLDEMI+FRQLTKLEVKEIADILL
Sbjct: 717 RIGFDLDY-EKDSSYNRIKSLVTQELKQYFRPEFLNRLDEMILFRQLTKLEVKEIADILL 775
Query: 373 QEVFERLKKKEIELQVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 552
QE+FERLKKKE+ELQVTERF+ERVVDEGYNPSYGARPLRRAIMRLLEDSM EKMLAREIK
Sbjct: 776 QELFERLKKKEVELQVTERFKERVVDEGYNPSYGARPLRRAIMRLLEDSMEEKMLAREIK 835
Query: 553 EGDSVIVDVDSEGKVTVLNGGSGTPTTSLEEQEDSLPVA 669
EGDSVIVDVDSEGKVTVLNGGSGTPTTSLEEQEDSLPVA
Sbjct: 836 EGDSVIVDVDSEGKVTVLNGGSGTPTTSLEEQEDSLPVA 874
>sp|P35100|CLPC_PEA ATP-dependent Clp protease ATP-binding subunit clpC homolog,
chloroplastic OS=Pisum sativum PE=2 SV=1
Length = 922
Score = 386 bits (991), Expect = 1e-106
Identities = 197/205 (96%), Positives = 202/205 (98%)
Frame = +1
Query: 13 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 192
YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR
Sbjct: 709 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 768
Query: 193 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILL 372
RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI+L
Sbjct: 769 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 828
Query: 373 QEVFERLKKKEIELQVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 552
+EVF+RLK KEIELQVTERFR+RVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK
Sbjct: 829 KEVFQRLKTKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 888
Query: 553 EGDSVIVDVDSEGKVTVLNGGSGTP 627
EGDSVIVDVDS+GKV VLNG SGTP
Sbjct: 889 EGDSVIVDVDSDGKVIVLNGSSGTP 913
>sp|P31542|CLPAB_SOLLC ATP-dependent Clp protease ATP-binding subunit clpA
homolog CD4B, chloroplastic OS=Solanum lycopersicum GN=CD4B PE=3 SV=1
Length = 923
Score = 383 bits (983), Expect = 9e-106
Identities = 197/211 (93%), Positives = 202/211 (95%)
Frame = +1
Query: 13 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 192
YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR
Sbjct: 709 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 768
Query: 193 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILL 372
RIGFDLD DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI+L
Sbjct: 769 RIGFDLDLDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 828
Query: 373 QEVFERLKKKEIELQVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 552
+EVFERLK KEIELQVTERFR+RVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLA EIK
Sbjct: 829 KEVFERLKVKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLANEIK 888
Query: 553 EGDSVIVDVDSEGKVTVLNGGSGTPTTSLEE 645
EGDSVIVDVDS+G VTVLNG SGTP+ E
Sbjct: 889 EGDSVIVDVDSDGNVTVLNGSSGTPSDPAPE 919
>sp|P31541|CLPAA_SOLLC ATP-dependent Clp protease ATP-binding subunit clpA
homolog CD4A, chloroplastic OS=Solanum lycopersicum GN=CD4A PE=3 SV=1
Length = 926
Score = 379 bits (972), Expect = 2e-104
Identities = 195/211 (92%), Positives = 201/211 (95%)
Frame = +1
Query: 13 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 192
YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR
Sbjct: 712 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 771
Query: 193 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILL 372
RIGFDLD+DEKDSSYNRIKSLVTEELKQYFRPEFLNRL EMIVFRQLTKLEVKEIADI+L
Sbjct: 772 RIGFDLDFDEKDSSYNRIKSLVTEELKQYFRPEFLNRLSEMIVFRQLTKLEVKEIADIML 831
Query: 373 QEVFERLKKKEIELQVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 552
+EVF RLK KEIELQVTERFR+RVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLA EIK
Sbjct: 832 KEVFVRLKNKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAGEIK 891
Query: 553 EGDSVIVDVDSEGKVTVLNGGSGTPTTSLEE 645
EGDSVIVDVDS+G VTVLNG SG P+ S E
Sbjct: 892 EGDSVIVDVDSDGNVTVLNGTSGAPSDSAPE 922
>sp|Q1XDF4|CLPC_PORYE ATP-dependent Clp protease ATP-binding subunit clpA
homolog OS=Porphyra yezoensis GN=clpC PE=3 SV=1
Length = 821
Score = 307 bits (785), Expect = 8e-083
Identities = 146/200 (73%), Positives = 182/200 (91%)
Frame = +1
Query: 13 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 192
YTV+LFDEIEKAHPD+FN++LQILEDGRLTD+KGRT+DFKNTLLIMTSN+GS VIEKGG
Sbjct: 615 YTVILFDEIEKAHPDIFNLLLQILEDGRLTDAKGRTIDFKNTLLIMTSNIGSKVIEKGGG 674
Query: 193 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILL 372
+GF+L D+ +S Y R++SLV EELKQYFRPEFLNRLDE+IVFRQLTK EV+EIA+++L
Sbjct: 675 SLGFELSEDQTESQYTRVRSLVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVREIAELML 734
Query: 373 QEVFERLKKKEIELQVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 552
EVF R+K+++I+L VTERF++R+V+EGYNPSYGARPLRRA+MRLLEDS+AE++L+ +IK
Sbjct: 735 NEVFARIKQQDIQLNVTERFKQRLVEEGYNPSYGARPLRRAVMRLLEDSLAEEVLSGKIK 794
Query: 553 EGDSVIVDVDSEGKVTVLNG 612
GDS +VDV +EG+VTVL G
Sbjct: 795 AGDSAVVDVTNEGEVTVLLG 814
>sp|P51332|CLPC_PORPU ATP-dependent Clp protease ATP-binding subunit clpA
homolog OS=Porphyra purpurea GN=clpC PE=3 SV=1
Length = 821
Score = 305 bits (780), Expect = 3e-082
Identities = 146/200 (73%), Positives = 181/200 (90%)
Frame = +1
Query: 13 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 192
YTV+LFDEIEKAHPD+FN++LQILEDGRLTD+KGRT+DFKNTLLIMTSN+GS VIEKGG
Sbjct: 615 YTVILFDEIEKAHPDIFNLLLQILEDGRLTDAKGRTIDFKNTLLIMTSNIGSKVIEKGGG 674
Query: 193 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILL 372
+GF+L D+ +S Y R++SLV EELKQYFRPEFLNRLDE+IVFRQLTK EV+EIA+++L
Sbjct: 675 SLGFELSEDQTESQYTRVRSLVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVREIAELML 734
Query: 373 QEVFERLKKKEIELQVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 552
EVF R+K+++I+L VTERF+ER+V+EGYNPSYGARPLRRA+MRLLEDS+AE++L+ +IK
Sbjct: 735 NEVFARIKQQDIQLNVTERFKERLVEEGYNPSYGARPLRRAVMRLLEDSLAEEVLSGKIK 794
Query: 553 EGDSVIVDVDSEGKVTVLNG 612
GDS +VDV +EG+V VL G
Sbjct: 795 AGDSPVVDVTNEGEVKVLLG 814
>sp|O78410|CLPC_GUITH ATP-dependent Clp protease ATP-binding subunit clpA
homolog OS=Guillardia theta GN=clpC PE=3 SV=1
Length = 819
Score = 299 bits (765), Expect = 2e-080
Identities = 147/200 (73%), Positives = 175/200 (87%)
Frame = +1
Query: 13 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 192
YTVVLFDEIEK HPDVFN++LQILEDGRLTDSKGRTVDFKNTLLI+TSNVGS VIEKGG
Sbjct: 612 YTVVLFDEIEKGHPDVFNLLLQILEDGRLTDSKGRTVDFKNTLLILTSNVGSKVIEKGGG 671
Query: 193 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILL 372
+GFDL D+ +S Y RIK+LV EELKQYFRPEFLNRLDE+IVFRQLTK EV EIA+I+L
Sbjct: 672 GLGFDLSEDQTESQYGRIKALVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVGEIAEIML 731
Query: 373 QEVFERLKKKEIELQVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 552
+EVF R+ +K I+L+VT RF+ +++EGYNP YGARPLRRA+MRLLED+++E+ LA +IK
Sbjct: 732 KEVFTRISEKGIQLEVTARFKTHLINEGYNPIYGARPLRRAVMRLLEDTLSEEFLAEKIK 791
Query: 553 EGDSVIVDVDSEGKVTVLNG 612
EGD+ +VDVD +GKV VL G
Sbjct: 792 EGDTAVVDVDDDGKVKVLLG 811
>sp|Q9TM05|CLPC_CYACA ATP-dependent Clp protease ATP-binding subunit clpA
homolog OS=Cyanidium caldarium GN=clpC PE=3 SV=1
Length = 854
Score = 289 bits (737), Expect = 3e-077
Identities = 139/202 (68%), Positives = 179/202 (88%)
Frame = +1
Query: 13 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 192
YTVVLFDEIEKAHPDVFN++LQILEDGRLTDSKGRT+DFKNTLLIMTSN+GS VIEK G
Sbjct: 645 YTVVLFDEIEKAHPDVFNLLLQILEDGRLTDSKGRTIDFKNTLLIMTSNIGSKVIEKKGG 704
Query: 193 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILL 372
+GF+L+ + ++ Y+R+++LV EELKQYFRPEFLNR+DE+IVFRQLTK EV++IA I+L
Sbjct: 705 GLGFELEENIEELQYSRMRNLVNEELKQYFRPEFLNRVDEIIVFRQLTKDEVRDIAHIML 764
Query: 373 QEVFERLKKKEIELQVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 552
+E+FER+K++ I LQVTERF+ +++EGYNPSYGARPLRRA++RLLEDS+AE++L+ +IK
Sbjct: 765 REIFERVKQQGISLQVTERFKNLLIEEGYNPSYGARPLRRALVRLLEDSLAEEVLSGKIK 824
Query: 553 EGDSVIVDVDSEGKVTVLNGGS 618
EGD+ ++DVD +V +L G S
Sbjct: 825 EGDNAMIDVDENKQVKILLGNS 846
>sp|P42762|ERD1_ARATH ERD1 protein, chloroplastic OS=Arabidopsis thaliana
GN=ERD1 PE=2 SV=1
Length = 945
Score = 216 bits (550), Expect = 1e-055
Identities = 107/198 (54%), Positives = 145/198 (73%), Gaps = 1/198 (0%)
Frame = +1
Query: 13 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 192
+TVVLFDEIEKAHPD+FN++LQ+ EDG LTDS+GR V FKN L+IMTSNVGS I KG
Sbjct: 730 FTVVLFDEIEKAHPDIFNILLQLFEDGHLTDSQGRRVSFKNALIIMTSNVGSLAIAKGRH 789
Query: 193 -RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIL 369
IGF LD DE+ +SY +K+LV EELK YFRPE LNR+DE+++FRQL K ++ EI +++
Sbjct: 790 GSIGFILDDDEEAASYTGMKALVVEELKNYFRPELLNRIDEIVIFRQLEKAQMMEILNLM 849
Query: 370 LQEVFERLKKKEIELQVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 549
LQ++ RL + L+V+E +E + +GY+P+YGARPLRR + ++ED ++E LA
Sbjct: 850 LQDLKSRLVALGVGLEVSEPVKELICKQGYDPAYGARPLRRTVTEIVEDPLSEAFLAGSF 909
Query: 550 KEGDSVIVDVDSEGKVTV 603
K GD+ V +D G +V
Sbjct: 910 KPGDTAFVVLDDTGNPSV 927
>sp|Q8EU05|CLPB_OCEIH Chaperone protein clpB OS=Oceanobacillus iheyensis GN=clpB
PE=3 SV=1
Length = 809
Score = 209 bits (531), Expect = 2e-053
Identities = 102/198 (51%), Positives = 154/198 (77%), Gaps = 3/198 (1%)
Frame = +1
Query: 13 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 192
Y+VVL DE+EKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NT++IMTSNVG+S + K +
Sbjct: 614 YSVVLLDEVEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTVIIMTSNVGASEL-KRNK 672
Query: 193 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILL 372
+GF LD +EKD Y +KS V EELK+ FRPEFLNR+DE IVF L K +K+I +++
Sbjct: 673 YVGFALDNEEKD--YKDMKSKVIEELKKAFRPEFLNRIDETIVFHSLEKEHMKDIVTLMV 730
Query: 373 QEVFERLKKKEIELQVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 552
Q++ +RLK++++ L +T++ E++ +EG++P YGARPLRR+I + +ED ++E++L I+
Sbjct: 731 QQLQKRLKEQDLHLSLTDKAIEKIANEGFDPEYGARPLRRSIQKNIEDLLSEELLRGAIE 790
Query: 553 EGDSVIVDVDSEGKVTVL 606
+ V + ++++G+ VL
Sbjct: 791 KEQQVKIGLNNKGEFIVL 808
>sp|Q2FJB5|CLPC_STAA3 ATP-dependent Clp protease ATP-binding subunit clpC
OS=Staphylococcus aureus (strain USA300) GN=clpC PE=3 SV=1
Length = 818
Score = 197 bits (499), Expect = 1e-049
Identities = 103/209 (49%), Positives = 148/209 (70%), Gaps = 4/209 (1%)
Frame = +1
Query: 13 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 192
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQ-DQR 669
Query: 193 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILL 372
GF D +D Y I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +++
Sbjct: 670 FAGFGGSSDGQD--YETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMV 727
Query: 373 QEVFERLKKKEIELQVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 552
++ RL ++ I + VT++ ++++ +EGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQI 787
Query: 553 EGDSVIVDVD-SEGKVTVLNGGSGTPTTS 636
EG V VD D E K + S T T S
Sbjct: 788 EGKKVTVDHDGKEFKYDIAEQTSETKTPS 816
>sp|Q2G0P5|CLPC_STAA8 ATP-dependent Clp protease ATP-binding subunit clpC
OS=Staphylococcus aureus (strain NCTC 8325) GN=clpC PE=1 SV=1
Length = 818
Score = 197 bits (499), Expect = 1e-049
Identities = 103/209 (49%), Positives = 148/209 (70%), Gaps = 4/209 (1%)
Frame = +1
Query: 13 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 192
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQ-DQR 669
Query: 193 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILL 372
GF D +D Y I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +++
Sbjct: 670 FAGFGGSSDGQD--YETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMV 727
Query: 373 QEVFERLKKKEIELQVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 552
++ RL ++ I + VT++ ++++ +EGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQI 787
Query: 553 EGDSVIVDVD-SEGKVTVLNGGSGTPTTS 636
EG V VD D E K + S T T S
Sbjct: 788 EGKKVTVDHDGKEFKYDIAEQTSETKTPS 816
>sp|Q2YSD6|CLPC_STAAB ATP-dependent Clp protease ATP-binding subunit clpC
OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=clpC PE=3
SV=1
Length = 818
Score = 197 bits (499), Expect = 1e-049
Identities = 103/209 (49%), Positives = 148/209 (70%), Gaps = 4/209 (1%)
Frame = +1
Query: 13 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 192
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQ-DQR 669
Query: 193 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILL 372
GF D +D Y I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +++
Sbjct: 670 FAGFGGSSDGQD--YETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMV 727
Query: 373 QEVFERLKKKEIELQVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 552
++ RL ++ I + VT++ ++++ +EGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQI 787
Query: 553 EGDSVIVDVD-SEGKVTVLNGGSGTPTTS 636
EG V VD D E K + S T T S
Sbjct: 788 EGKKVTVDHDGKEFKYDIAEQTSETKTPS 816
>sp|Q5HRM8|CLPC_STAEQ ATP-dependent Clp protease ATP-binding subunit clpC
OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=clpC PE=3
SV=1
Length = 817
Score = 193 bits (488), Expect = 2e-048
Identities = 95/192 (49%), Positives = 141/192 (73%), Gaps = 3/192 (1%)
Frame = +1
Query: 13 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 192
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQELQ-DQR 669
Query: 193 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILL 372
GF + S Y ++ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +++
Sbjct: 670 FAGF--GGASEGSDYETVRKTMMKELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMV 727
Query: 373 QEVFERLKKKEIELQVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 552
++ RL ++ I + VT++ +E++ +EGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTHRLSEQNINIVVTDKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNKI 787
Query: 553 EGDSVIVDVDSE 588
EG V +D D +
Sbjct: 788 EGKEVTIDHDGK 799
>sp|Q8CQ88|CLPC_STAES ATP-dependent Clp protease ATP-binding subunit clpC
OS=Staphylococcus epidermidis (strain ATCC 12228) GN=clpC PE=3 SV=1
Length = 817
Score = 193 bits (488), Expect = 2e-048
Identities = 95/192 (49%), Positives = 141/192 (73%), Gaps = 3/192 (1%)
Frame = +1
Query: 13 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 192
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQELQ-DQR 669
Query: 193 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILL 372
GF + S Y ++ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +++
Sbjct: 670 FAGF--GGASEGSDYETVRKTMMKELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMV 727
Query: 373 QEVFERLKKKEIELQVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 552
++ RL ++ I + VT++ +E++ +EGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTHRLSEQNINIVVTDKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNKI 787
Query: 553 EGDSVIVDVDSE 588
EG V +D D +
Sbjct: 788 EGKEVTIDHDGK 799
>sp|P24428|CLPC_MYCLE Probable ATP-dependent Clp protease ATP-binding subunit
OS=Mycobacterium leprae GN=clpC PE=3 SV=2
Length = 848
Score = 192 bits (487), Expect = 3e-048
Identities = 93/191 (48%), Positives = 137/191 (71%), Gaps = 3/191 (1%)
Frame = +1
Query: 13 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 192
++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K
Sbjct: 619 FSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISK--- 675
Query: 193 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILL 372
+G ++ Y R+K V +ELK++FRPEFLNR+D++IVF QL++ E+ + D+++
Sbjct: 676 PVGLGFTQGSGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLSRDEIIRMVDLMI 735
Query: 373 QEVFERLKKKEIELQVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 552
V +LK K++ L++T + + + G++P GARPLRR I R +ED ++EK+L E+
Sbjct: 736 SRVANQLKVKDMTLELTNKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVG 795
Query: 553 EGDSVIVDVDS 585
G V VDVD+
Sbjct: 796 PGQVVTVDVDN 806
>sp|Q4L3I4|CLPC_STAHJ ATP-dependent Clp protease ATP-binding subunit clpC
OS=Staphylococcus haemolyticus (strain JCSC1435) GN=clpC PE=3 SV=1
Length = 824
Score = 192 bits (487), Expect = 3e-048
Identities = 94/192 (48%), Positives = 143/192 (74%), Gaps = 3/192 (1%)
Frame = +1
Query: 13 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 192
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRQVDFRNTVIIMTSNVGAQELQ-DQR 669
Query: 193 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILL 372
GF + D Y I+ + +ELK FRPEFLNR+D++IVF +L+K E+KEI +++
Sbjct: 670 FAGFGGGSEGHD--YETIRKTMMKELKNSFRPEFLNRVDDIIVFHKLSKDELKEIVTMMV 727
Query: 373 QEVFERLKKKEIELQVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 552
++ +RL +++I + VT++ +E++ +EGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTQRLSEQDINIVVTDKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNQI 787
Query: 553 EGDSVIVDVDSE 588
EG V++D D +
Sbjct: 788 EGKEVVIDHDGD 799
>sp|P0A523|CLPC_MYCBO Probable ATP-dependent Clp protease ATP-binding subunit
OS=Mycobacterium bovis GN=clpC PE=3 SV=1
Length = 848
Score = 191 bits (485), Expect = 5e-048
Identities = 94/191 (49%), Positives = 136/191 (71%), Gaps = 3/191 (1%)
Frame = +1
Query: 13 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 192
++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K
Sbjct: 619 FSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISK--- 675
Query: 193 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILL 372
+G ++ Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+ + D+++
Sbjct: 676 PVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTREEIIRMVDLMI 735
Query: 373 QEVFERLKKKEIELQVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 552
V +LK K++ L +T+ + + G++P GARPLRR I R +ED ++EK+L E+
Sbjct: 736 SRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVG 795
Query: 553 EGDSVIVDVDS 585
G V VDVD+
Sbjct: 796 PGQVVTVDVDN 806
>sp|P0A522|CLPC_MYCTU Probable ATP-dependent Clp protease ATP-binding subunit
OS=Mycobacterium tuberculosis GN=clpC PE=1 SV=1
Length = 848
Score = 191 bits (485), Expect = 5e-048
Identities = 94/191 (49%), Positives = 136/191 (71%), Gaps = 3/191 (1%)
Frame = +1
Query: 13 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 192
++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I K
Sbjct: 619 FSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISK--- 675
Query: 193 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILL 372
+G ++ Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+ + D+++
Sbjct: 676 PVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTREEIIRMVDLMI 735
Query: 373 QEVFERLKKKEIELQVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 552
V +LK K++ L +T+ + + G++P GARPLRR I R +ED ++EK+L E+
Sbjct: 736 SRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVG 795
Query: 553 EGDSVIVDVDS 585
G V VDVD+
Sbjct: 796 PGQVVTVDVDN 806
>sp|O67588|CLPB_AQUAE Chaperone protein clpB OS=Aquifex aeolicus GN=clpB PE=3
SV=1
Length = 1006
Score = 190 bits (481), Expect = 1e-047
Identities = 91/188 (48%), Positives = 137/188 (72%), Gaps = 4/188 (2%)
Frame = +1
Query: 13 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 192
Y+V+L DEIEKAHP V ++ LQ+L+DGRLTDS GRTVDF+NT++IMTSN+GS +
Sbjct: 792 YSVILLDEIEKAHPRVLDLFLQVLDDGRLTDSHGRTVDFRNTVIIMTSNIGSQYL----L 847
Query: 193 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILL 372
I D D + + + + K V EELK Y RPEF+NR+DE+IVF+ LT E+ +I D+L+
Sbjct: 848 NIPVDADEETLNREFEKAKEKVLEELKLYMRPEFINRIDEIIVFKPLTMRELSKIIDLLI 907
Query: 373 QEVFERLKKKEIELQVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 552
V +RL ++ I++++TE ++ +V GY+P++GARPL+R I + +E +A+K++ EIK
Sbjct: 908 ANVNKRLAERNIKIELTEEAKKELVRRGYDPAFGARPLKRTIQKYVETPLADKIIRGEIK 967
Query: 553 EGDSVIVD 576
+G +V+VD
Sbjct: 968 DGMTVVVD 975
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,767,994,010
Number of Sequences: 518415
Number of Extensions: 98767994010
Number of Successful Extensions: 632508636
Number of sequences better than 0.0: 0
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