BLASTX 7.6.2
Query= UN23353 /QuerySize=1328
(1327 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G10360.1 | Symbols: | FUNCTIONS IN: molecular... 460 1e-129
TAIR9_protein||AT4G10360.2 | Symbols: | FUNCTIONS IN: molecular... 460 1e-129
TAIR9_protein||AT1G31300.1 | Symbols: | FUNCTIONS IN: molecular... 257 2e-068
TAIR9_protein||AT1G31300.2 | Symbols: | FUNCTIONS IN: molecular... 257 2e-068
TAIR9_protein||AT4G19645.1 | Symbols: | FUNCTIONS IN: molecular... 248 7e-066
TAIR9_protein||AT4G19645.2 | Symbols: | FUNCTIONS IN: molecular... 248 7e-066
>TAIR9_protein||AT4G10360.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral
to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: TRAM, LAG1 and CLN8 homology
(InterPro:IPR006634); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G31300.2); Has 453 Blast hits to 451 proteins
in 101 species: Archae - 0; Bacteria - 0; Metazoa - 225; Fungi - 97;
Plants - 91; Viruses - 3; Other Eukaryotes - 37 (source: NCBI BLink). |
chr4:6420679-6422108 FORWARD
Length = 267
Score = 460 bits (1182), Expect = 1e-129
Identities = 227/267 (85%), Positives = 245/267 (91%), Gaps = 5/267 (1%)
Frame = -2
Query: 1104 MTTNFDD---SSKQLVLLASVCSGILMCKIVYDLTGFISPLLFSAYGKLDGKVRMEWNNR 934
MTT+ DD SS+QL+LLAS+CSG LMCKIVYDLT FISPLLFS YGKLD KVRMEWNNR
Sbjct: 1 MTTDSDDGFVSSRQLLLLASICSGALMCKIVYDLTRFISPLLFSVYGKLDSKVRMEWNNR 60
Query: 933 GFSTFHAVFVSVASIYLLVISDQFDESVHGDSVINSTTRLSESVMGISLGYFVADLMMIF 754
GFSTFHAVF SVASIY LVISDQFDE+VHGDSVINSTTRLSESVMGISLGYF+ADL MIF
Sbjct: 61 GFSTFHAVFTSVASIYFLVISDQFDENVHGDSVINSTTRLSESVMGISLGYFLADLAMIF 120
Query: 753 WHFPTLGGVEYVFHHCLSMFSIILSVTSGQAQFYIFMVLLSEATTPFVNLRWYLDASGQK 574
W+FPTLGG+EYVFHH LSMF+IILSVTSGQ+QFYIF+VLLSEATTPFVNLRWYLD SGQK
Sbjct: 121 WYFPTLGGIEYVFHHFLSMFAIILSVTSGQSQFYIFLVLLSEATTPFVNLRWYLDNSGQK 180
Query: 573 GSKAYTLNGIALFLGWLVARILLFIYFFVHMYSHFHQVKQVFPLGFYSLIAVGPVLSAMN 394
GSKAYTLNGIALFLGWLVAR+LLFI+FFVHMY HFHQVKQVFPLGFYSL+ + P L+ MN
Sbjct: 181 GSKAYTLNGIALFLGWLVARVLLFIFFFVHMYLHFHQVKQVFPLGFYSLLTIPPALAVMN 240
Query: 393 LLWFWKITKGLIKTISKA--TGKKKQ* 319
LLWFWKITKGLIKT+SKA +G KKQ*
Sbjct: 241 LLWFWKITKGLIKTLSKAKTSGMKKQ* 267
>TAIR9_protein||AT4G10360.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral
to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: TRAM, LAG1 and CLN8 homology
(InterPro:IPR006634); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G31300.2); Has 453 Blast hits to 451 proteins
in 101 species: Archae - 0; Bacteria - 0; Metazoa - 225; Fungi - 97;
Plants - 91; Viruses - 3; Other Eukaryotes - 37 (source: NCBI BLink). |
chr4:6420679-6422108 FORWARD
Length = 267
Score = 460 bits (1182), Expect = 1e-129
Identities = 227/267 (85%), Positives = 245/267 (91%), Gaps = 5/267 (1%)
Frame = -2
Query: 1104 MTTNFDD---SSKQLVLLASVCSGILMCKIVYDLTGFISPLLFSAYGKLDGKVRMEWNNR 934
MTT+ DD SS+QL+LLAS+CSG LMCKIVYDLT FISPLLFS YGKLD KVRMEWNNR
Sbjct: 1 MTTDSDDGFVSSRQLLLLASICSGALMCKIVYDLTRFISPLLFSVYGKLDSKVRMEWNNR 60
Query: 933 GFSTFHAVFVSVASIYLLVISDQFDESVHGDSVINSTTRLSESVMGISLGYFVADLMMIF 754
GFSTFHAVF SVASIY LVISDQFDE+VHGDSVINSTTRLSESVMGISLGYF+ADL MIF
Sbjct: 61 GFSTFHAVFTSVASIYFLVISDQFDENVHGDSVINSTTRLSESVMGISLGYFLADLAMIF 120
Query: 753 WHFPTLGGVEYVFHHCLSMFSIILSVTSGQAQFYIFMVLLSEATTPFVNLRWYLDASGQK 574
W+FPTLGG+EYVFHH LSMF+IILSVTSGQ+QFYIF+VLLSEATTPFVNLRWYLD SGQK
Sbjct: 121 WYFPTLGGIEYVFHHFLSMFAIILSVTSGQSQFYIFLVLLSEATTPFVNLRWYLDNSGQK 180
Query: 573 GSKAYTLNGIALFLGWLVARILLFIYFFVHMYSHFHQVKQVFPLGFYSLIAVGPVLSAMN 394
GSKAYTLNGIALFLGWLVAR+LLFI+FFVHMY HFHQVKQVFPLGFYSL+ + P L+ MN
Sbjct: 181 GSKAYTLNGIALFLGWLVARVLLFIFFFVHMYLHFHQVKQVFPLGFYSLLTIPPALAVMN 240
Query: 393 LLWFWKITKGLIKTISKA--TGKKKQ* 319
LLWFWKITKGLIKT+SKA +G KKQ*
Sbjct: 241 LLWFWKITKGLIKTLSKAKTSGMKKQ* 267
>TAIR9_protein||AT1G31300.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral
to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: TRAM, LAG1 and CLN8 homology
(InterPro:IPR006634); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G19645.2); Has 478 Blast hits to 478 proteins
in 104 species: Archae - 0; Bacteria - 0; Metazoa - 269; Fungi - 98;
Plants - 80; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). |
chr1:11194308-11195955 FORWARD
Length = 279
Score = 257 bits (654), Expect = 2e-068
Identities = 122/238 (51%), Positives = 164/238 (68%)
Frame = -2
Query: 1056 SVCSGILMCKIVYDLTGFISPLLFSAYGKLDGKVRMEWNNRGFSTFHAVFVSVASIYLLV 877
SV +GI +CK+VYDL FIS Y L R+EWNNRG ST HA+F+S S+Y +
Sbjct: 37 SVLTGIFLCKVVYDLCHFISNSHSKTYIILTKIQRIEWNNRGISTVHAIFISAMSLYFVF 96
Query: 876 ISDQFDESVHGDSVINSTTRLSESVMGISLGYFVADLMMIFWHFPTLGGVEYVFHHCLSM 697
SD F + H D V+ ++RLS +GIS+GYF+ADL MIFW +P+LGG+EY+ HH LS
Sbjct: 97 WSDLFSDRWHNDLVVFRSSRLSSLGLGISIGYFLADLGMIFWKYPSLGGIEYIVHHSLSG 156
Query: 696 FSIILSVTSGQAQFYIFMVLLSEATTPFVNLRWYLDASGQKGSKAYTLNGIALFLGWLVA 517
++ S+ SG+ Q Y +MVL+SE TTP +NLRWYLD +G K S AY +NG+ +FL WLVA
Sbjct: 157 VAVAYSLFSGEGQLYTYMVLISEITTPEINLRWYLDTAGMKKSLAYVVNGVFIFLAWLVA 216
Query: 516 RILLFIYFFVHMYSHFHQVKQVFPLGFYSLIAVGPVLSAMNLLWFWKITKGLIKTISK 343
RILLFIY F H+Y H++QV ++ G+ + V L MNL+WF KI +G+ KT++K
Sbjct: 217 RILLFIYMFYHVYLHYNQVMRMHIFGYVLVFGVPAALGVMNLIWFGKIVRGVKKTLAK 274
>TAIR9_protein||AT1G31300.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral
to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: TRAM, LAG1 and CLN8 homology
(InterPro:IPR006634); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G19645.2); Has 478 Blast hits to 478 proteins
in 104 species: Archae - 0; Bacteria - 0; Metazoa - 269; Fungi - 98;
Plants - 80; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). |
chr1:11194308-11195955 FORWARD
Length = 279
Score = 257 bits (654), Expect = 2e-068
Identities = 122/238 (51%), Positives = 164/238 (68%)
Frame = -2
Query: 1056 SVCSGILMCKIVYDLTGFISPLLFSAYGKLDGKVRMEWNNRGFSTFHAVFVSVASIYLLV 877
SV +GI +CK+VYDL FIS Y L R+EWNNRG ST HA+F+S S+Y +
Sbjct: 37 SVLTGIFLCKVVYDLCHFISNSHSKTYIILTKIQRIEWNNRGISTVHAIFISAMSLYFVF 96
Query: 876 ISDQFDESVHGDSVINSTTRLSESVMGISLGYFVADLMMIFWHFPTLGGVEYVFHHCLSM 697
SD F + H D V+ ++RLS +GIS+GYF+ADL MIFW +P+LGG+EY+ HH LS
Sbjct: 97 WSDLFSDRWHNDLVVFRSSRLSSLGLGISIGYFLADLGMIFWKYPSLGGIEYIVHHSLSG 156
Query: 696 FSIILSVTSGQAQFYIFMVLLSEATTPFVNLRWYLDASGQKGSKAYTLNGIALFLGWLVA 517
++ S+ SG+ Q Y +MVL+SE TTP +NLRWYLD +G K S AY +NG+ +FL WLVA
Sbjct: 157 VAVAYSLFSGEGQLYTYMVLISEITTPEINLRWYLDTAGMKKSLAYVVNGVFIFLAWLVA 216
Query: 516 RILLFIYFFVHMYSHFHQVKQVFPLGFYSLIAVGPVLSAMNLLWFWKITKGLIKTISK 343
RILLFIY F H+Y H++QV ++ G+ + V L MNL+WF KI +G+ KT++K
Sbjct: 217 RILLFIYMFYHVYLHYNQVMRMHIFGYVLVFGVPAALGVMNLIWFGKIVRGVKKTLAK 274
>TAIR9_protein||AT4G19645.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral
to membrane; CONTAINS InterPro DOMAIN/s: TRAM, LAG1 and CLN8 homology
(InterPro:IPR006634); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G31300.2); Has 401 Blast hits to 401 proteins
in 98 species: Archae - 0; Bacteria - 0; Metazoa - 186; Fungi - 102;
Plants - 84; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). |
chr4:10689941-10691298 REVERSE
Length = 269
Score = 248 bits (632), Expect = 7e-066
Identities = 120/239 (50%), Positives = 162/239 (67%), Gaps = 1/239 (0%)
Frame = -2
Query: 1056 SVCSGILMCKIVYDLTGFISPLLFSAYGKLDGKVRMEWNNRGFSTFHAVFVSVASIYLLV 877
SV GI +CK+VYDLT S + +Y L R+EWNNRG ST HA+F+S ++Y
Sbjct: 28 SVLVGICLCKLVYDLTELFSSIHVKSYSALTKIKRIEWNNRGISTVHAIFISFMALYFAF 87
Query: 876 ISDQFDESVHGDSV-INSTTRLSESVMGISLGYFVADLMMIFWHFPTLGGVEYVFHHCLS 700
SD F + +++ + + LS +G+S+GYF+ADL MIFW +P+LGG EY+ HHCLS
Sbjct: 88 FSDLFSDQRSLETLTVFRNSPLSTFGLGVSVGYFLADLGMIFWLYPSLGGSEYILHHCLS 147
Query: 699 MFSIILSVTSGQAQFYIFMVLLSEATTPFVNLRWYLDASGQKGSKAYTLNGIALFLGWLV 520
++ S+ SG+AQ Y +MVL+SE TTP +NLRWYLD +G K SKAY +NG+A+F WL
Sbjct: 148 GTAVAYSLFSGEAQLYTYMVLISEVTTPEINLRWYLDIAGLKRSKAYLVNGVAIFFAWLT 207
Query: 519 ARILLFIYFFVHMYSHFHQVKQVFPLGFYSLIAVGPVLSAMNLLWFWKITKGLIKTISK 343
ARILLFIY F H+Y+H+ QV ++ G+ + V LS MNL+WF KI KGL KT+ K
Sbjct: 208 ARILLFIYMFYHVYTHYDQVIEMHTFGYLLVFVVPISLSVMNLIWFGKIVKGLKKTLEK 266
>TAIR9_protein||AT4G19645.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral
to membrane; CONTAINS InterPro DOMAIN/s: TRAM, LAG1 and CLN8 homology
(InterPro:IPR006634); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G31300.2); Has 401 Blast hits to 401 proteins
in 98 species: Archae - 0; Bacteria - 0; Metazoa - 186; Fungi - 102;
Plants - 84; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). |
chr4:10689941-10691298 REVERSE
Length = 269
Score = 248 bits (632), Expect = 7e-066
Identities = 120/239 (50%), Positives = 162/239 (67%), Gaps = 1/239 (0%)
Frame = -2
Query: 1056 SVCSGILMCKIVYDLTGFISPLLFSAYGKLDGKVRMEWNNRGFSTFHAVFVSVASIYLLV 877
SV GI +CK+VYDLT S + +Y L R+EWNNRG ST HA+F+S ++Y
Sbjct: 28 SVLVGICLCKLVYDLTELFSSIHVKSYSALTKIKRIEWNNRGISTVHAIFISFMALYFAF 87
Query: 876 ISDQFDESVHGDSV-INSTTRLSESVMGISLGYFVADLMMIFWHFPTLGGVEYVFHHCLS 700
SD F + +++ + + LS +G+S+GYF+ADL MIFW +P+LGG EY+ HHCLS
Sbjct: 88 FSDLFSDQRSLETLTVFRNSPLSTFGLGVSVGYFLADLGMIFWLYPSLGGSEYILHHCLS 147
Query: 699 MFSIILSVTSGQAQFYIFMVLLSEATTPFVNLRWYLDASGQKGSKAYTLNGIALFLGWLV 520
++ S+ SG+AQ Y +MVL+SE TTP +NLRWYLD +G K SKAY +NG+A+F WL
Sbjct: 148 GTAVAYSLFSGEAQLYTYMVLISEVTTPEINLRWYLDIAGLKRSKAYLVNGVAIFFAWLT 207
Query: 519 ARILLFIYFFVHMYSHFHQVKQVFPLGFYSLIAVGPVLSAMNLLWFWKITKGLIKTISK 343
ARILLFIY F H+Y+H+ QV ++ G+ + V LS MNL+WF KI KGL KT+ K
Sbjct: 208 ARILLFIYMFYHVYTHYDQVIEMHTFGYLLVFVVPISLSVMNLIWFGKIVKGLKKTLEK 266
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,093,658,928
Number of Sequences: 33410
Number of Extensions: 12093658928
Number of Successful Extensions: 386572036
Number of sequences better than 0.0: 0
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