BLASTX 7.6.2
Query= UN23354 /QuerySize=795
(794 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G17080.1 | Symbols: | unknown protein | chr1:... 280 7e-076
TAIR9_protein||AT1G53560.1 | Symbols: | unknown protein | chr1:... 169 3e-042
TAIR9_protein||AT1G29970.1 | Symbols: RPL18AA | RPL18AA (60S RIB... 133 1e-031
TAIR9_protein||AT1G29970.2 | Symbols: RPL18AA | RPL18AA (60S RIB... 119 2e-027
TAIR9_protein||AT3G14595.1 | Symbols: | unknown protein | chr3:... 116 2e-026
TAIR9_protein||AT1G29970.3 | Symbols: | RPL18AA (60S RIBOSOMAL ... 71 6e-013
>TAIR9_protein||AT1G17080.1 | Symbols: | unknown protein | chr1:5840458-5841536
REVERSE
Length = 155
Score = 280 bits (716), Expect = 7e-076
Identities = 136/162 (83%), Positives = 145/162 (89%), Gaps = 8/162 (4%)
Frame = +2
Query: 143 MGQGEEDKSKGFADEAGTQHHHHHQYGTFQGVSNYPPPRPQNSPPVTGFPQPSAPPGVYD 322
MG GEEDKSKGFA E G Q HHQYGTFQGVSNYPP PQNS PVTGFPQPSAPPGVYD
Sbjct: 1 MGHGEEDKSKGFASEEGNQ---HHQYGTFQGVSNYPP--PQNSAPVTGFPQPSAPPGVYD 55
Query: 323 PPAPHYAHGYQTVPVY-GIAEGRPVHVRQRRLPCCGIGLGWFLFIVGFFLGAIPWYVGMF 499
AP+YAHGYQTVPV+ G+AEGRP VRQRRLPCCGIGLGWFLFIVGFFLGAIPWYVG+F
Sbjct: 56 SGAPYYAHGYQTVPVHGGVAEGRP--VRQRRLPCCGIGLGWFLFIVGFFLGAIPWYVGLF 113
Query: 500 IMIVGRRIDHREKPGYIACTIAAILATIAVVLGVTKGAEDW* 625
IM+ GRRID+REKPGYIACTIAAILATIAV+LGV+KGA+DW*
Sbjct: 114 IMMFGRRIDYREKPGYIACTIAAILATIAVILGVSKGADDW* 155
>TAIR9_protein||AT1G53560.1 | Symbols: | unknown protein |
chr1:19984908-19985960 REVERSE
Length = 154
Score = 169 bits (426), Expect = 3e-042
Identities = 83/140 (59%), Positives = 98/140 (70%), Gaps = 8/140 (5%)
Frame = +2
Query: 218 YGTFQGVSNYPP---PRPQNSPPVTGFPQPSAPPGV--YDPPAPHYAHGYQTVPVYGIAE 382
YGTFQGV YPP P P + PV G PQPS PPG +D Y +QTV Y +++
Sbjct: 16 YGTFQGVPTYPPPSYPHPPSHHPVIGIPQPSPPPGSPHHDISVHQYIQEHQTVAGYPVSQ 75
Query: 383 GRPVHVRQRRLPCCGIGLGWFLFIVGFFLGAIPWYVGMFIMIVGRRIDHREKPGYIACTI 562
GRP RQ RLPCCG+GLGWFLFI+GF LGAIPWYVG+FI++ RID REKPGY+ACTI
Sbjct: 76 GRP--ARQNRLPCCGLGLGWFLFIIGFLLGAIPWYVGVFILVCA-RIDPREKPGYVACTI 132
Query: 563 AAILATIAVVLGVTKGAEDW 622
AA++ATI +V GV G W
Sbjct: 133 AAVVATITIVFGVMGGRGVW 152
>TAIR9_protein||AT1G29970.1 | Symbols: RPL18AA | RPL18AA (60S RIBOSOMAL PROTEIN
L18A-1) | chr1:10499952-10501311 REVERSE
Length = 159
Score = 133 bits (334), Expect = 1e-031
Identities = 67/153 (43%), Positives = 93/153 (60%), Gaps = 9/153 (5%)
Frame = +2
Query: 185 EAGTQHHHHHQYGTFQGVSNYPPPRP-----QNSPPVTGFPQPSAPPGVYDPPAPHYAHG 349
++ H + YGTFQGV+N+P P P Q P+T FP + +YA G
Sbjct: 10 DSTVNQQHQYYYGTFQGVANFPTPTPPPQFMQPQHPITTFPGHAYQNLQGHGGGVNYAQG 69
Query: 350 YQ-TVPVYGIAEGRPVHVRQRRLPCCGIGLGWFLFIVGFFLGAIPWYVGMFIMIVGRRID 526
+ VP Y + E RP + + LPCCG+G+GWFLFI+GF G IPWY+G FI++V +D
Sbjct: 70 FPVVVPDYTVVEVRP--MIEHELPCCGLGMGWFLFIMGFLFGGIPWYLGAFIVLV-TSVD 126
Query: 527 HREKPGYIACTIAAILATIAVVLGVTKGAEDW* 625
HREK GY+AC+IA+++ IAV+LG+T W*
Sbjct: 127 HREKAGYVACSIASVVYLIAVMLGMTGDINIW* 159
>TAIR9_protein||AT1G29970.2 | Symbols: RPL18AA | RPL18AA (60S RIBOSOMAL PROTEIN
L18A-1); structural constituent of ribosome | chr1:10498458-10501311
REVERSE
Length = 313
Score = 119 bits (298), Expect = 2e-027
Identities = 60/133 (45%), Positives = 81/133 (60%), Gaps = 9/133 (6%)
Frame = +2
Query: 185 EAGTQHHHHHQYGTFQGVSNYPPPRP-----QNSPPVTGFPQPSAPPGVYDPPAPHYAHG 349
++ H + YGTFQGV+N+P P P Q P+T FP + +YA G
Sbjct: 10 DSTVNQQHQYYYGTFQGVANFPTPTPPPQFMQPQHPITTFPGHAYQNLQGHGGGVNYAQG 69
Query: 350 YQ-TVPVYGIAEGRPVHVRQRRLPCCGIGLGWFLFIVGFFLGAIPWYVGMFIMIVGRRID 526
+ VP Y + E RP + + LPCCG+G+GWFLFI+GF G IPWY+G FI++V +D
Sbjct: 70 FPVVVPDYTVVEVRP--MIEHELPCCGLGMGWFLFIMGFLFGGIPWYLGAFIVLV-TSVD 126
Query: 527 HREKPGYIACTIA 565
HREK GY+AC+IA
Sbjct: 127 HREKAGYVACSIA 139
>TAIR9_protein||AT3G14595.1 | Symbols: | unknown protein | chr3:4909037-4910226
FORWARD
Length = 133
Score = 116 bits (289), Expect = 2e-026
Identities = 60/131 (45%), Positives = 76/131 (58%), Gaps = 26/131 (19%)
Frame = +2
Query: 230 QGVSNYPPPRPQNSPPVTGFPQPSAPPGVYDPPAPHYAHGYQTVPVYGIAEGRPVHVRQR 409
QGVSNYP PQ PP TG+PQP+ P YA GY V GR
Sbjct: 27 QGVSNYP---PQQQPPATGYPQPAQP----------YAQGYVVNGVRPTEHGR------- 66
Query: 410 RLPCCGIGLGWFLFIVGFFLGAIPWYVGMFIMIVGRRIDHREKPGYIACTIAAILATIAV 589
CCGIG+GW LFI+GFF A+PWY+G F+++ R + RE+PGYIAC + A+ ATI V
Sbjct: 67 ---CCGIGIGWVLFILGFFF-ALPWYIGFFLLLFSR--NPRERPGYIACAVGAVFATIIV 120
Query: 590 VLGVTKGAEDW 622
+ G +G+ W
Sbjct: 121 IFGTVRGSGVW 131
>TAIR9_protein||AT1G29970.3 | Symbols: | RPL18AA (60S RIBOSOMAL PROTEIN L18A-1)
| chr1:10499952-10501311 REVERSE
Length = 201
Score = 71 bits (173), Expect = 6e-013
Identities = 31/60 (51%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = +2
Query: 446 LFIVGFFLGAIPWYVGMFIMIVGRRIDHREKPGYIACTIAAILATIAVVLGVTKGAEDW* 625
+FI+GF G IPWY+G FI++V +DHREK GY+AC+IA+++ IAV+LG+T W*
Sbjct: 143 VFIMGFLFGGIPWYLGAFIVLV-TSVDHREKAGYVACSIASVVYLIAVMLGMTGDINIW* 201
Score = 67 bits (162), Expect = 1e-011
Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Frame = +2
Query: 185 EAGTQHHHHHQYGTFQGVSNYPPPRP-----QNSPPVTGFPQPSAPPGVYDPPAPHYAHG 349
++ H + YGTFQGV+N+P P P Q P+T FP + +YA G
Sbjct: 10 DSTVNQQHQYYYGTFQGVANFPTPTPPPQFMQPQHPITTFPGHAYQNLQGHGGGVNYAQG 69
Query: 350 YQ-TVPVYGIAEGRPVHVRQRRLPCCGIGLGWFL 448
+ VP Y + E RP + + LPCCG+G+GWFL
Sbjct: 70 FPVVVPDYTVVEVRP--MIEHELPCCGLGMGWFL 101
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,093,658,928
Number of Sequences: 33410
Number of Extensions: 12093658928
Number of Successful Extensions: 386572036
Number of sequences better than 0.0: 0
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