BLASTX 7.6.2
Query= UN23385 /QuerySize=1283
(1282 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G46280.1 | Symbols: TRIP-1, TIF3I1 | TRIP-1 (T... 598 4e-171
TAIR9_protein||AT2G46280.2 | Symbols: TRIP-1, TIF3I1 | TRIP-1 (T... 598 4e-171
TAIR9_protein||AT2G46290.1 | Symbols: | eukaryotic translation ... 591 4e-169
TAIR9_protein||AT2G46280.3 | Symbols: TRIP-1, TIF3I1 | TRIP-1 (T... 436 2e-122
TAIR9_protein||AT1G15470.1 | Symbols: | transducin family prote... 82 9e-016
TAIR9_protein||AT3G15610.1 | Symbols: | transducin family prote... 79 4e-015
TAIR9_protein||AT1G52730.2 | Symbols: | transducin family prote... 75 8e-014
TAIR9_protein||AT1G52730.1 | Symbols: | transducin family prote... 75 8e-014
TAIR9_protein||AT1G73720.1 | Symbols: | transducin family prote... 58 1e-008
TAIR9_protein||AT2G43770.1 | Symbols: | transducin family prote... 58 1e-008
TAIR9_protein||AT5G08390.1 | Symbols: | FUNCTIONS IN: molecular... 56 4e-008
TAIR9_protein||AT5G52820.1 | Symbols: | WD-40 repeat family pro... 56 5e-008
TAIR9_protein||AT5G23430.1 | Symbols: | transducin family prote... 55 7e-008
TAIR9_protein||AT5G64730.1 | Symbols: | transducin family prote... 55 7e-008
TAIR9_protein||AT5G23430.2 | Symbols: | transducin family prote... 55 7e-008
TAIR9_protein||AT1G61210.1 | Symbols: | WD-40 repeat family pro... 52 6e-007
TAIR9_protein||AT1G11160.1 | Symbols: | nucleotide binding | ch... 50 3e-006
>TAIR9_protein||AT2G46280.1 | Symbols: TRIP-1, TIF3I1 | TRIP-1 (TGF-BETA
RECEPTOR INTERACTING PROTEIN 1); nucleotide binding / protein binding |
chr2:19003656-19005393 REVERSE
Length = 329
Score = 598 bits (1540), Expect = 4e-171
Identities = 285/329 (86%), Positives = 311/329 (94%)
Frame = +1
Query: 109 MRPILMKGHERPLTFLRYNRDGDMLFSCAKDHTPTLWYADNGERHGTFRGHNGAVWCCDV 288
MRPILMKGHERPLTFLRYNR+GD+LFSCAKDHTPTLW+ADNGER GT+RGHNGAVWCCDV
Sbjct: 1 MRPILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDV 60
Query: 289 SRDSLTLITGSADQTAKLWDVKTGQQLFSFKFGSPARSVDFSLGDKLAVITTDPFMERTS 468
SRDS LITGSADQTAKLWDVK+G++LF+FKF +P RSVDF++GD+LAVITTD F++RT+
Sbjct: 61 SRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTA 120
Query: 469 AIHVKRIAEDPADQVSESVLVLESPNGRKRINRAVWGPLNQTIVSGGEDAVLRIWDAETG 648
AIHVKRIAEDP +Q +ESVLVL P+G+KRINRAVWGPLNQTIVSGGED V+RIWDAETG
Sbjct: 121 AIHVKRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAETG 180
Query: 649 KLLKESDAEVGHKNTITSLTKAADDSHFITGSLDKTAKLWDMRTLTLLKTYVSGVPVNAV 828
KLLK+SD EVGHK ITSL KAADDSHF+TGSLDKTAKLWDMRTLTLLKTY + VPVNAV
Sbjct: 181 KLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYTTVVPVNAV 240
Query: 829 SMSPLLDHVVLGGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNP 1008
S+SPLL+HVVLGGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNP
Sbjct: 241 SLSPLLNHVVLGGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNP 300
Query: 1009 DGKSFSSGGEDGYVRLHHFDSDYFNIRI* 1095
DGKSFSSGGEDGYVRLHHFDSDYFNI+I*
Sbjct: 301 DGKSFSSGGEDGYVRLHHFDSDYFNIKI* 329
>TAIR9_protein||AT2G46280.2 | Symbols: TRIP-1, TIF3I1 | TRIP-1 (TGF-BETA
RECEPTOR INTERACTING PROTEIN 1); nucleotide binding / protein binding |
chr2:19003656-19005393 REVERSE
Length = 329
Score = 598 bits (1540), Expect = 4e-171
Identities = 285/329 (86%), Positives = 311/329 (94%)
Frame = +1
Query: 109 MRPILMKGHERPLTFLRYNRDGDMLFSCAKDHTPTLWYADNGERHGTFRGHNGAVWCCDV 288
MRPILMKGHERPLTFLRYNR+GD+LFSCAKDHTPTLW+ADNGER GT+RGHNGAVWCCDV
Sbjct: 1 MRPILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDV 60
Query: 289 SRDSLTLITGSADQTAKLWDVKTGQQLFSFKFGSPARSVDFSLGDKLAVITTDPFMERTS 468
SRDS LITGSADQTAKLWDVK+G++LF+FKF +P RSVDF++GD+LAVITTD F++RT+
Sbjct: 61 SRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTA 120
Query: 469 AIHVKRIAEDPADQVSESVLVLESPNGRKRINRAVWGPLNQTIVSGGEDAVLRIWDAETG 648
AIHVKRIAEDP +Q +ESVLVL P+G+KRINRAVWGPLNQTIVSGGED V+RIWDAETG
Sbjct: 121 AIHVKRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAETG 180
Query: 649 KLLKESDAEVGHKNTITSLTKAADDSHFITGSLDKTAKLWDMRTLTLLKTYVSGVPVNAV 828
KLLK+SD EVGHK ITSL KAADDSHF+TGSLDKTAKLWDMRTLTLLKTY + VPVNAV
Sbjct: 181 KLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYTTVVPVNAV 240
Query: 829 SMSPLLDHVVLGGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNP 1008
S+SPLL+HVVLGGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNP
Sbjct: 241 SLSPLLNHVVLGGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNP 300
Query: 1009 DGKSFSSGGEDGYVRLHHFDSDYFNIRI* 1095
DGKSFSSGGEDGYVRLHHFDSDYFNI+I*
Sbjct: 301 DGKSFSSGGEDGYVRLHHFDSDYFNIKI* 329
>TAIR9_protein||AT2G46290.1 | Symbols: | eukaryotic translation initiation
factor 3 subunit 2, putative / eIF-3 beta, putative / eIF3i, putative |
chr2:19005910-19007797 REVERSE
Length = 356
Score = 591 bits (1522), Expect = 4e-169
Identities = 281/330 (85%), Positives = 311/330 (94%)
Frame = +1
Query: 106 RMRPILMKGHERPLTFLRYNRDGDMLFSCAKDHTPTLWYADNGERHGTFRGHNGAVWCCD 285
RMRPILMKGHERPLTFLRYNR+GD+LFSCAKDHTPT+W+ADNGER GT+RGH+GAVWCCD
Sbjct: 27 RMRPILMKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCD 86
Query: 286 VSRDSLTLITGSADQTAKLWDVKTGQQLFSFKFGSPARSVDFSLGDKLAVITTDPFMERT 465
+SRDS LITGSADQTAKLWDVK+G++LF+FKFG+PARSVDFS+GD LAVITTD F+ +
Sbjct: 87 ISRDSSRLITGSADQTAKLWDVKSGKELFTFKFGAPARSVDFSVGDHLAVITTDHFVGTS 146
Query: 466 SAIHVKRIAEDPADQVSESVLVLESPNGRKRINRAVWGPLNQTIVSGGEDAVLRIWDAET 645
SAIHVKRIAEDP DQV +SVLVL+SP+G+K+INRAVWGPLNQTIVSGGEDA +RIWDAET
Sbjct: 147 SAIHVKRIAEDPEDQVGDSVLVLQSPDGKKKINRAVWGPLNQTIVSGGEDAAIRIWDAET 206
Query: 646 GKLLKESDAEVGHKNTITSLTKAADDSHFITGSLDKTAKLWDMRTLTLLKTYVSGVPVNA 825
GKLLK+SD EVGHK ITSL KAADDSHF+TGS DKTAKLWDMRTLTL+KTY + VPVNA
Sbjct: 207 GKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWDMRTLTLIKTYTTVVPVNA 266
Query: 826 VSMSPLLDHVVLGGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFN 1005
V+MSPLL+HVVLGGGQDASAVTTTDHRAGKFEAKFYD ILQEEIGGVKGHFGPINALAF+
Sbjct: 267 VAMSPLLNHVVLGGGQDASAVTTTDHRAGKFEAKFYDTILQEEIGGVKGHFGPINALAFS 326
Query: 1006 PDGKSFSSGGEDGYVRLHHFDSDYFNIRI* 1095
PDGKSFSSGGEDGYVRLHHFDS+YFNI+I*
Sbjct: 327 PDGKSFSSGGEDGYVRLHHFDSNYFNIKI* 356
>TAIR9_protein||AT2G46280.3 | Symbols: TRIP-1, TIF3I1 | TRIP-1 (TGF-BETA
RECEPTOR INTERACTING PROTEIN 1); nucleotide binding / protein binding |
chr2:19004179-19005393 REVERSE
Length = 255
Score = 436 bits (1120), Expect = 2e-122
Identities = 207/249 (83%), Positives = 232/249 (93%)
Frame = +1
Query: 109 MRPILMKGHERPLTFLRYNRDGDMLFSCAKDHTPTLWYADNGERHGTFRGHNGAVWCCDV 288
MRPILMKGHERPLTFLRYNR+GD+LFSCAKDHTPTLW+ADNGER GT+RGHNGAVWCCDV
Sbjct: 1 MRPILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDV 60
Query: 289 SRDSLTLITGSADQTAKLWDVKTGQQLFSFKFGSPARSVDFSLGDKLAVITTDPFMERTS 468
SRDS LITGSADQTAKLWDVK+G++LF+FKF +P RSVDF++GD+LAVITTD F++RT+
Sbjct: 61 SRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTA 120
Query: 469 AIHVKRIAEDPADQVSESVLVLESPNGRKRINRAVWGPLNQTIVSGGEDAVLRIWDAETG 648
AIHVKRIAEDP +Q +ESVLVL P+G+KRINRAVWGPLNQTIVSGGED V+RIWDAETG
Sbjct: 121 AIHVKRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAETG 180
Query: 649 KLLKESDAEVGHKNTITSLTKAADDSHFITGSLDKTAKLWDMRTLTLLKTYVSGVPVNAV 828
KLLK+SD EVGHK ITSL KAADDSHF+TGSLDKTAKLWDMRTLTLLKTY + VPVNAV
Sbjct: 181 KLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYTTVVPVNAV 240
Query: 829 SMSPLLDHV 855
S+SPLL+HV
Sbjct: 241 SLSPLLNHV 249
>TAIR9_protein||AT1G15470.1 | Symbols: | transducin family protein / WD-40
repeat family protein | chr1:5315838-5317696 FORWARD
Length = 334
Score = 82 bits (200), Expect = 9e-016
Identities = 40/103 (38%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Frame = +1
Query: 115 PILMKGHERPLTFLRYN---RDGDMLFSCAKDHTPTLWYADNGERHGTFRGHNGAVWCCD 285
P++ GH RP+ + Y+ DG L S +KD P L + G+ GTF GH GAVW C
Sbjct: 4 PLVCHGHSRPVVDVAYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCS 63
Query: 286 VSRDSLTLITGSADQTAKLWDVKTGQQLFSFKFGSPARSVDFS 414
+ ++++ + SAD TAK+W+ TG +L SF+ R+ FS
Sbjct: 64 LDKNAIRAASASADFTAKIWNALTGDELHSFEHKHIVRACAFS 106
>TAIR9_protein||AT3G15610.1 | Symbols: | transducin family protein / WD-40
repeat family protein | chr3:5291076-5292796 REVERSE
Length = 342
Score = 79 bits (194), Expect = 4e-015
Identities = 48/141 (34%), Positives = 70/141 (49%), Gaps = 5/141 (3%)
Frame = +1
Query: 94 KRRKRMRPILMKGHERPLTFLRYN---RDGDMLFSCAKDHTPTLWYADNGERHGTFRGHN 264
+++K P++ GH RP+ L Y+ DG L S +KD P L + G+ GTF GH
Sbjct: 2 EKKKVATPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSQPMLRNGETGDWIGTFEGHK 61
Query: 265 GAVWCCDVSRDSLTLITGSADQTAKLWDVKTGQQLFSFKFGSPARSVDFSLGDKLAVITT 444
GAVW + ++L + SAD +AKLWD TG L SF+ R+ FS K + T
Sbjct: 62 GAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFSQDTKYLI--T 119
Query: 445 DPFMERTSAIHVKRIAEDPAD 507
F + + R+ P +
Sbjct: 120 GGFEKILRVFDLNRLDAPPTE 140
>TAIR9_protein||AT1G52730.2 | Symbols: | transducin family protein / WD-40
repeat family protein | chr1:19642866-19644978 FORWARD
Length = 344
Score = 75 bits (183), Expect = 8e-014
Identities = 43/110 (39%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Frame = +1
Query: 94 KRRKRMRPILMKGHERPLTFLRYN---RDGDMLFSCAKDHTPTLWYADNGERHGTFRGHN 264
+++K P + GH RP+ L Y+ DG L S +KD P L + G+ GTF GH
Sbjct: 2 EKKKVTIPQVCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHK 61
Query: 265 GAVWCCDVSRDSLTLITGSADQTAKLWDVKTGQQLFSFKFGSPARSVDFS 414
GAVW + ++L + SAD +AKLWD TG L SF+ R+ FS
Sbjct: 62 GAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFS 111
>TAIR9_protein||AT1G52730.1 | Symbols: | transducin family protein / WD-40
repeat family protein | chr1:19642866-19644978 FORWARD
Length = 344
Score = 75 bits (183), Expect = 8e-014
Identities = 43/110 (39%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Frame = +1
Query: 94 KRRKRMRPILMKGHERPLTFLRYN---RDGDMLFSCAKDHTPTLWYADNGERHGTFRGHN 264
+++K P + GH RP+ L Y+ DG L S +KD P L + G+ GTF GH
Sbjct: 2 EKKKVTIPQVCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHK 61
Query: 265 GAVWCCDVSRDSLTLITGSADQTAKLWDVKTGQQLFSFKFGSPARSVDFS 414
GAVW + ++L + SAD +AKLWD TG L SF+ R+ FS
Sbjct: 62 GAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFS 111
>TAIR9_protein||AT1G73720.1 | Symbols: | transducin family protein / WD-40
repeat family protein | chr1:27725059-27729722 FORWARD
Length = 512
Score = 58 bits (139), Expect = 1e-008
Identities = 34/95 (35%), Positives = 48/95 (50%)
Frame = +1
Query: 133 HERPLTFLRYNRDGDMLFSCAKDHTPTLWYADNGERHGTFRGHNGAVWCCDVSRDSLTLI 312
H + +T L ++RDG L S + D T + +G+ FRGH V + D +I
Sbjct: 304 HSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRII 363
Query: 313 TGSADQTAKLWDVKTGQQLFSFKFGSPARSVDFSL 417
T S+D T K+WD KT L +FK P R D S+
Sbjct: 364 TASSDCTVKVWDSKTTDCLQTFKPPPPLRGTDASV 398
>TAIR9_protein||AT2G43770.1 | Symbols: | transducin family protein / WD-40
repeat family protein | chr2:18134272-18135303 REVERSE
Length = 344
Score = 58 bits (138), Expect = 1e-008
Identities = 34/98 (34%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Frame = +1
Query: 574 WGPLNQTIVSGGEDAVLRIWDAETGKLLKESDAEVGHKNTITSLTKAADDSHFITGSLDK 753
W IVS D +R WD ETGK +K+ N+ + I+GS D
Sbjct: 104 WTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRG--PPLIISGSDDG 161
Query: 754 TAKLWDMRTLTLLKTYVSGVPVNAVSMSPLLDHVVLGG 867
TAKLWDMR ++T+ + AVS S D + GG
Sbjct: 162 TAKLWDMRQRGAIQTFPDKYQITAVSFSDAADKIFTGG 199
>TAIR9_protein||AT5G08390.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING
ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like
(InterPro:IPR011046), WD40 repeat, region (InterPro:IPR017986),
WD40/YVTN repeat-like (InterPro:IPR015943), WD40 repeat
(InterPro:IPR001680); BEST Arabidopsis thaliana protein match is:
transducin family protein / WD-40 repeat family protein
(TAIR:AT5G23430.1); Has 84267 Blast hits to 30722 proteins in 748
species: Archae - 68; Bacteria - 7813; Metazoa - 39755; Fungi - 16342;
Plants - 8110; Viruses - 6; Other Eukaryotes - 12173 (source: NCBI
BLink). | chr5:2701448-2706910 FORWARD
Length = 840
Score = 56 bits (134), Expect = 4e-008
Identities = 27/77 (35%), Positives = 39/77 (50%)
Frame = +1
Query: 127 KGHERPLTFLRYNRDGDMLFSCAKDHTPTLWYADNGERHGTFRGHNGAVWCCDVSRDSLT 306
KGH R + LR+ DG + S +D+ +W G+ F+ H G + D
Sbjct: 140 KGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFL 199
Query: 307 LITGSADQTAKLWDVKT 357
L TGSAD+T K WD++T
Sbjct: 200 LATGSADKTVKFWDLET 216
>TAIR9_protein||AT5G52820.1 | Symbols: | WD-40 repeat family protein /
notchless protein, putative | chr5:21401423-21404203 FORWARD
Length = 474
Score = 56 bits (133), Expect = 5e-008
Identities = 26/78 (33%), Positives = 44/78 (56%)
Frame = +1
Query: 124 MKGHERPLTFLRYNRDGDMLFSCAKDHTPTLWYADNGERHGTFRGHNGAVWCCDVSRDSL 303
+ GH++ + + ++ DG + S + D + LW G+ FRGH G V+ S DS
Sbjct: 356 LTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSR 415
Query: 304 TLITGSADQTAKLWDVKT 357
L++GS D T K+W+++T
Sbjct: 416 LLLSGSKDSTLKIWEIRT 433
>TAIR9_protein||AT5G23430.1 | Symbols: | transducin family protein / WD-40
repeat family protein | chr5:7894073-7899862 REVERSE
Length = 838
Score = 55 bits (132), Expect = 7e-008
Identities = 27/77 (35%), Positives = 39/77 (50%)
Frame = +1
Query: 127 KGHERPLTFLRYNRDGDMLFSCAKDHTPTLWYADNGERHGTFRGHNGAVWCCDVSRDSLT 306
KGH R + LR+ DG + S +D+ +W G+ F+ H G + D
Sbjct: 140 KGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFL 199
Query: 307 LITGSADQTAKLWDVKT 357
L TGSAD+T K WD++T
Sbjct: 200 LATGSADRTVKFWDLET 216
>TAIR9_protein||AT5G64730.1 | Symbols: | transducin family protein / WD-40
repeat family protein | chr5:25873146-25875021 FORWARD
Length = 300
Score = 55 bits (132), Expect = 7e-008
Identities = 27/87 (31%), Positives = 42/87 (48%)
Frame = +1
Query: 121 LMKGHERPLTFLRYNRDGDMLFSCAKDHTPTLWYADNGERHGTFRGHNGAVWCCDVSRDS 300
++KGHE + R+N DG+ +C KD T LW G T++ H V V+ D+
Sbjct: 13 ILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDN 72
Query: 301 LTLITGSADQTAKLWDVKTGQQLFSFK 381
+ D+ WDV TG+ + F+
Sbjct: 73 AKFCSCGGDRQVYYWDVSTGRVIRKFR 99
>TAIR9_protein||AT5G23430.2 | Symbols: | transducin family protein / WD-40
repeat family protein | chr5:7894073-7899862 REVERSE
Length = 837
Score = 55 bits (132), Expect = 7e-008
Identities = 27/77 (35%), Positives = 39/77 (50%)
Frame = +1
Query: 127 KGHERPLTFLRYNRDGDMLFSCAKDHTPTLWYADNGERHGTFRGHNGAVWCCDVSRDSLT 306
KGH R + LR+ DG + S +D+ +W G+ F+ H G + D
Sbjct: 140 KGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFL 199
Query: 307 LITGSADQTAKLWDVKT 357
L TGSAD+T K WD++T
Sbjct: 200 LATGSADRTVKFWDLET 216
>TAIR9_protein||AT1G61210.1 | Symbols: | WD-40 repeat family protein / katanin
p80 subunit, putative | chr1:22564785-22571555 FORWARD
Length = 1181
Score = 52 bits (124), Expect = 6e-007
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Frame = +1
Query: 127 KGHERPLTFLRYNRDGDMLFSCAKDHTPTLWYADNGERHGTFRGHNGAVWCCDVSRDSLT 306
KGH R ++ +R+ DG + S D+ +W G+ F+ H G + D
Sbjct: 139 KGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFL 198
Query: 307 LITGSADQTAKLWDVKTGQQLFSFK-FGSPARSVDF 411
L TGSAD+T K WD++T + + S + + RS+ F
Sbjct: 199 LATGSADRTVKFWDLETFELIGSTRPEATGVRSIKF 234
>TAIR9_protein||AT1G11160.1 | Symbols: | nucleotide binding |
chr1:3733406-3739363 FORWARD
Length = 1022
Score = 50 bits (118), Expect = 3e-006
Identities = 25/77 (32%), Positives = 39/77 (50%)
Frame = +1
Query: 127 KGHERPLTFLRYNRDGDMLFSCAKDHTPTLWYADNGERHGTFRGHNGAVWCCDVSRDSLT 306
KGH R ++ + ++ DG + S D+ +W G+ F+ H G + D
Sbjct: 139 KGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFL 198
Query: 307 LITGSADQTAKLWDVKT 357
L TGSAD+T K WD++T
Sbjct: 199 LATGSADRTVKFWDLET 215
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,093,658,928
Number of Sequences: 33410
Number of Extensions: 12093658928
Number of Successful Extensions: 386572036
Number of sequences better than 0.0: 0
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