BLASTX 7.6.2
Query= UN23419 /QuerySize=750
(749 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G00100.1 | Symbols: ATRPS13A, RPS13, PFL2 | AT... 294 5e-080
TAIR9_protein||AT3G60770.1 | Symbols: | 40S ribosomal protein S... 293 9e-080
>TAIR9_protein||AT4G00100.1 | Symbols: ATRPS13A, RPS13, PFL2 | ATRPS13A
(ARABIDOPSIS THALIANA RIBOSOMAL PROTEIN S13A); structural constituent
of ribosome | chr4:37172-38123 FORWARD
Length = 152
Score = 294 bits (751), Expect = 5e-080
Identities = 146/152 (96%), Positives = 149/152 (98%)
Frame = +3
Query: 78 MGRMHSRGKGISASALPYKRSPPTWLKTTALDVDESICKFAKKGLTPSQIGVILRDSHGI 257
MGRMHSRGKGISASALPYKRS P+WLKTT+ DVDESICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1 MGRMHSRGKGISASALPYKRSSPSWLKTTSQDVDESICKFAKKGLTPSQIGVILRDSHGI 60
Query: 258 PQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 437
PQVKSVTG+KILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61 PQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
Query: 438 RIHRLARYYKKTKKLPPVWKYESTTASTLVA* 533
RIHRLARYYKKTKKLPPVWKYESTTASTLVA*
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA* 152
>TAIR9_protein||AT3G60770.1 | Symbols: | 40S ribosomal protein S13 (RPS13A) |
chr3:22460525-22461656 REVERSE
Length = 152
Score = 293 bits (749), Expect = 9e-080
Identities = 146/152 (96%), Positives = 148/152 (97%)
Frame = +3
Query: 78 MGRMHSRGKGISASALPYKRSPPTWLKTTALDVDESICKFAKKGLTPSQIGVILRDSHGI 257
MGRMHSRGKGISASALPYKRS P+WLKTT DVDESICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1 MGRMHSRGKGISASALPYKRSSPSWLKTTPQDVDESICKFAKKGLTPSQIGVILRDSHGI 60
Query: 258 PQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 437
PQVKSVTG+KILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61 PQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
Query: 438 RIHRLARYYKKTKKLPPVWKYESTTASTLVA* 533
RIHRLARYYKKTKKLPPVWKYESTTASTLVA*
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA* 152
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,093,658,928
Number of Sequences: 33410
Number of Extensions: 12093658928
Number of Successful Extensions: 386572036
Number of sequences better than 0.0: 0
|