BLASTX 7.6.2
Query= UN23421 /QuerySize=1868
(1867 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G17620.1 | Symbols: | FUNCTIONS IN: molecular... 627 9e-180
TAIR9_protein||AT5G17610.1 | Symbols: | unknown protein | chr5:... 205 1e-052
>TAIR9_protein||AT5G17620.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plant
nuclear matrix 1 (InterPro:IPR010604); Has 62 Blast hits to 62 proteins
in 32 species: Archae - 0; Bacteria - 19; Metazoa - 8; Fungi - 0;
Plants - 31; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
chr5:5805934-5808455 REVERSE
Length = 330
Score = 627 bits (1616), Expect = 9e-180
Identities = 321/330 (97%), Positives = 324/330 (98%)
Frame = -3
Query: 1805 MAAKQMEEIQKKLAVLSYPRANAPAQSLLFAGMERYALLEWLFFKLLGDKSPFSQQNLQG 1626
MAAKQMEEIQKKL +LSYPRANAPAQSLLFAGMERYALLEWLFFKLLGDKSPFSQQNLQG
Sbjct: 1 MAAKQMEEIQKKLRLLSYPRANAPAQSLLFAGMERYALLEWLFFKLLGDKSPFSQQNLQG 60
Query: 1625 DAGVRDEETVRIQYLAEIAKFLGFTPTVDIEAIQGHGTYEDRMEMLRNIVDLVEASLFSD 1446
DAGVRDEETVRIQYLAEIAKFLG TPTVDIEAIQGHGTYEDRMEMLRNIVDLVEASLFSD
Sbjct: 61 DAGVRDEETVRIQYLAEIAKFLGITPTVDIEAIQGHGTYEDRMEMLRNIVDLVEASLFSD 120
Query: 1445 NPEWSIDEQVAKDIQLIDAIAERQSLIFSEECKLFPADVQIQSIYPLPDVSELETKLSEQ 1266
N EWSIDEQVAKDIQLIDAIAERQSLIFSEECKLFPADVQIQSIYPLPDVSELETKLSEQ
Sbjct: 121 NQEWSIDEQVAKDIQLIDAIAERQSLIFSEECKLFPADVQIQSIYPLPDVSELETKLSEQ 180
Query: 1265 AKILSNLQQKVDDLAAKHAYNPDEEYAEVESELRARLESFLETARAFNTIYTKEIRPWTH 1086
AKILSNLQQKVDDLAAKHAYNPDEEY EVES+LRARLESFLETARAFNTIYTKEIRPWTH
Sbjct: 181 AKILSNLQQKVDDLAAKHAYNPDEEYTEVESQLRARLESFLETARAFNTIYTKEIRPWTH 240
Query: 1085 MMEVPQLHGFGPAANRLLEAYNMLLKFLGNLKNLRDSHAALSIGSSGTVAGEPSSVTRIV 906
MMEVPQLHGFGPAANRLLEAYNMLLKFLGNLKNLRDSHAALSIGSSGTVAGEPSSVTRIV
Sbjct: 241 MMEVPQLHGFGPAANRLLEAYNMLLKFLGNLKNLRDSHAALSIGSSGTVAGEPSSVTRIV 300
Query: 905 SECEAALTVFNRDLGILSASIAREQGERL* 816
S+CEAALTV NRDLGILSASIAREQGERL*
Sbjct: 301 SDCEAALTVLNRDLGILSASIAREQGERL* 330
>TAIR9_protein||AT5G17610.1 | Symbols: | unknown protein | chr5:5804011-5805045
FORWARD
Length = 122
Score = 205 bits (519), Expect = 1e-052
Identities = 98/121 (80%), Positives = 106/121 (87%)
Frame = +1
Query: 97 MGISGARSSTVCILLLLSLSLLFSCAFSKSPRPISDAEIREKKNQCYADIESGLWGWQFK 276
M IS ARSS VC+LLLL C FSKSPRPISD EIR+KK++CY DIESGLWGWQ K
Sbjct: 1 MEISQARSSFVCLLLLLLSMCFVPCVFSKSPRPISDVEIRQKKSECYGDIESGLWGWQCK 60
Query: 277 ASSIAKENCALRCLSPVCYELIYESDPLEEGEKDLIRSQEYKYCMYKSSLGESLDGVRGS 456
+S+IAKENCALRCLSPVCY+LIYESDPLEEGEKDLIRSQEYKYCMYKSSLGESL+GVRG
Sbjct: 61 SSAIAKENCALRCLSPVCYQLIYESDPLEEGEKDLIRSQEYKYCMYKSSLGESLEGVRGI 120
Query: 457 F 459
F
Sbjct: 121 F 121
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,093,658,928
Number of Sequences: 33410
Number of Extensions: 12093658928
Number of Successful Extensions: 386572036
Number of sequences better than 0.0: 0
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