BLASTX 7.6.2
Query= UN23435 /QuerySize=1031
(1030 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297815600|ref|XP_002875683.1| hypothetical protein ARALYDRAFT... 285 1e-074
gi|18407844|ref|NP_566872.1| histone deacetylase HDT1 [Arabidops... 231 2e-058
gi|2392769|gb|AAB70032.1| putative histone deacetylase [Arabidop... 231 2e-058
gi|334185733|ref|NP_001190012.1| histone deacetylase HDT1 [Arabi... 229 6e-058
gi|73919938|sp|Q6V9I6.1|HDT1_SOLCH RecName: Full=Histone deacety... 189 7e-046
gi|269969912|gb|ACZ54945.1| type 2 histone deacetylase a [Nicoti... 162 1e-037
gi|269969914|gb|ACZ54946.1| type 2 histone deacetylase b [Nicoti... 161 2e-037
gi|224104989|ref|XP_002313645.1| histone deacetylase [Populus tr... 158 2e-036
gi|118482036|gb|ABK92949.1| unknown [Populus trichocarpa] 157 3e-036
gi|297808263|ref|XP_002872015.1| predicted protein [Arabidopsis ... 157 4e-036
gi|118481941|gb|ABK92903.1| unknown [Populus trichocarpa] 154 3e-035
gi|118482528|gb|ABK93186.1| unknown [Populus trichocarpa] 154 3e-035
gi|224131666|ref|XP_002328078.1| histone deacetylase [Populus tr... 154 3e-035
gi|269969916|gb|ACZ54947.1| type 2 histone deacetylase c [Nicoti... 153 4e-035
gi|30688577|ref|NP_851056.1| histone deacetylase HDT2 [Arabidops... 144 2e-032
gi|145358319|ref|NP_197657.3| histone deacetylase HDT2 [Arabidop... 144 2e-032
gi|81074563|gb|ABB55369.1| histone deacetylase 2a-like [Solanum ... 144 3e-032
gi|255638252|gb|ACU19439.1| unknown [Glycine max] 142 1e-031
gi|84468402|dbj|BAE71284.1| putative histone deacetylase [Trifol... 131 2e-028
gi|145357606|ref|NP_195994.3| histone deacetylase HDT3 [Arabidop... 124 4e-026
>gi|297815600|ref|XP_002875683.1| hypothetical protein ARALYDRAFT_484880
[Arabidopsis lyrata subsp. lyrata]
Length = 247
Score = 285 bits (728), Expect = 1e-074
Identities = 157/271 (57%), Positives = 188/271 (69%), Gaps = 39/271 (14%)
Frame = +3
Query: 69 MEFWGVEVQAGRPLKVTPEDGTLVHISHASLGDCKGKKGEAVTLNVKVGDKKFVMGTLLS 248
MEFWG+EV+ G+P+ VTP++GTL+H+S ASLG+CK KKGE V L+VKVG++ V+GTL +
Sbjct: 1 MEFWGIEVKPGKPVTVTPKEGTLIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLST 60
Query: 249 ESIPQTCFDMLFDQEFELSHNWGKGSVHFVGFQCPNNKDDEGGEDFSDSEEEEEEEVAAT 428
E+IPQ D++F++EFELSH WGKGSV+FVG++ PN K E+ EEEE EEV A
Sbjct: 61 ENIPQLFCDLVFEKEFELSHTWGKGSVYFVGYKTPNIKYPLNSEE----EEEEVEEVPA- 115
Query: 429 VAANGNAAKGVTKPK-----------PEADDSDSEGMDEDGSDDEDDSEEEEEAP---KA 566
GNAAK V KPK E DDSDS+ MDED SD +DDSEEEEE P K
Sbjct: 116 ----GNAAKAVAKPKAKPAEVKPVADAEEDDSDSDEMDEDDSDGDDDSEEEEETPTPKKP 171
Query: 567 ETRRKRAHEVAPGPKTPVSAKKAKAEATPKKTEEKKKGGPATPHPAKKGGNTPATATQSP 746
+ +KRA+E A PKTPVS+KKAK TP+KT K NTP ATQSP
Sbjct: 172 ASNKKRANETA--PKTPVSSKKAKVAVTPQKT--------------GKDINTPKPATQSP 215
Query: 747 KSASQVSCGSCKKTFNSSNALESHTKAKHSA 839
KSASQVSCGSCKKTFNS NALE+H KAKHSA
Sbjct: 216 KSASQVSCGSCKKTFNSGNALEAHNKAKHSA 246
>gi|18407844|ref|NP_566872.1| histone deacetylase HDT1 [Arabidopsis thaliana]
Length = 245
Score = 231 bits (588), Expect = 2e-058
Identities = 123/220 (55%), Positives = 155/220 (70%), Gaps = 14/220 (6%)
Frame = +3
Query: 69 MEFWGVEVQAGRPLKVTPEDGTLVHISHASLGDCKGKKGEAVTLNVKVGDKKFVMGTLLS 248
MEFWG+EV++G+P+ VTPE+G L+H+S ASLG+CK KKGE V L+VKVG++ V+GTL +
Sbjct: 1 MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLST 60
Query: 249 ESIPQTCFDMLFDQEFELSHNWGKGSVHFVGFQCPNNKDDEGGEDFSDSEEEEEEEVAAT 428
E+IPQ D++FD+EFELSH WGKGSV+FVG++ PN + + +S+ EEEEEEEV A
Sbjct: 61 ENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKTPNIEP----QGYSEEEEEEEEEVPAG 116
Query: 429 VAANGNAAKGVTKP---KP----EADDSDSEGMDEDGSDDEDDSEEEEEAPKAETRRKRA 587
AA AK KP KP E D+SDS+GMDED SD ED EEE K + +KRA
Sbjct: 117 NAAKA-VAKPKAKPAEVKPAVDDEEDESDSDGMDEDDSDGEDSEEEEPTPKKPASSKKRA 175
Query: 588 HEVAPGPKTPVSAKKAKAEATPKKTEEKKKGGPATPHPAK 707
+E PK PVSAKKAK TP+KT+EKKKGG A K
Sbjct: 176 NETT--PKAPVSAKKAKVAVTPQKTDEKKKGGKAANQSPK 213
>gi|2392769|gb|AAB70032.1| putative histone deacetylase [Arabidopsis thaliana]
Length = 257
Score = 231 bits (588), Expect = 2e-058
Identities = 123/220 (55%), Positives = 155/220 (70%), Gaps = 14/220 (6%)
Frame = +3
Query: 69 MEFWGVEVQAGRPLKVTPEDGTLVHISHASLGDCKGKKGEAVTLNVKVGDKKFVMGTLLS 248
MEFWG+EV++G+P+ VTPE+G L+H+S ASLG+CK KKGE V L+VKVG++ V+GTL +
Sbjct: 1 MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLST 60
Query: 249 ESIPQTCFDMLFDQEFELSHNWGKGSVHFVGFQCPNNKDDEGGEDFSDSEEEEEEEVAAT 428
E+IPQ D++FD+EFELSH WGKGSV+FVG++ PN + + +S+ EEEEEEEV A
Sbjct: 61 ENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKTPNIEP----QGYSEEEEEEEEEVPAG 116
Query: 429 VAANGNAAKGVTKP---KP----EADDSDSEGMDEDGSDDEDDSEEEEEAPKAETRRKRA 587
AA AK KP KP E D+SDS+GMDED SD ED EEE K + +KRA
Sbjct: 117 NAAKA-VAKPKAKPAEVKPAVDDEEDESDSDGMDEDDSDGEDSEEEEPTPKKPASSKKRA 175
Query: 588 HEVAPGPKTPVSAKKAKAEATPKKTEEKKKGGPATPHPAK 707
+E PK PVSAKKAK TP+KT+EKKKGG A K
Sbjct: 176 NETT--PKAPVSAKKAKVAVTPQKTDEKKKGGKAANQSPK 213
>gi|334185733|ref|NP_001190012.1| histone deacetylase HDT1 [Arabidopsis
thaliana]
Length = 242
Score = 229 bits (583), Expect = 6e-058
Identities = 122/224 (54%), Positives = 151/224 (67%), Gaps = 25/224 (11%)
Frame = +3
Query: 69 MEFWGVEVQAGRPLKVTPEDGTLVHISHASLGDCKGKKGEAVTLNVKVGDKKFVMGTLLS 248
MEFWG+EV++G+P+ VTPE+G L+H+S ASLG+CK KKGE V L+VKVG++ V+GTL +
Sbjct: 1 MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLST 60
Query: 249 ESIPQTCFDMLFDQEFELSHNWGKGSVHFVGFQCPNNKDDEGGEDFSDSEEEEEEEVAAT 428
E+IPQ D++FD+EFELSH WGKGSV+FVG++ PN + EEEEEEV A
Sbjct: 61 ENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKTPNIEP-------QGYSEEEEEEVPA- 112
Query: 429 VAANGNAAKGVTKPK-----------PEADDSDSEGMDEDGSDDEDDSEEEEEAPKAETR 575
GNAAK V KPK E D+SDS+GMDED SD ED EEE K +
Sbjct: 113 ----GNAAKAVAKPKAKPAEVKPAVDDEEDESDSDGMDEDDSDGEDSEEEEPTPKKPASS 168
Query: 576 RKRAHEVAPGPKTPVSAKKAKAEATPKKTEEKKKGGPATPHPAK 707
+KRA+E PK PVSAKKAK TP+KT+EKKKGG A K
Sbjct: 169 KKRANETT--PKAPVSAKKAKVAVTPQKTDEKKKGGKAANQSPK 210
>gi|73919938|sp|Q6V9I6.1|HDT1_SOLCH RecName: Full=Histone deacetylase HDT1;
AltName: Full=Histone deacetylase 2a; Short=HD2a; AltName: Full=ScHD2a
Length = 269
Score = 189 bits (479), Expect = 7e-046
Identities = 109/276 (39%), Positives = 154/276 (55%), Gaps = 28/276 (10%)
Frame = +3
Query: 69 MEFWGVEVQAGRPLKVTPEDGTLVHISHASLGDCKGKKGEAVTLNVKVGDKKFVMGTLLS 248
MEFWG EV++G PL V P DG ++H+S ASLG+ K K E+V L+V + KK V+GTL S
Sbjct: 1 MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKSESVCLSVNIDGKKLVLGTLNS 60
Query: 249 ESIPQTCFDMLFDQEFELSHNWGKGSVHFVGFQCPNNKDDEGGEDFSDSEEEEEEEVAAT 428
E +PQ FD++FD++FELSHN GSV+F G++ N ++E ED D +E +E++ T
Sbjct: 61 EKVPQQQFDLVFDRDFELSHNLKSGSVYFFGYKATNPFEEE--EDDEDDYDESDEDIPLT 118
Query: 429 VAANGNAAKGVTKPKPEADDSDSEGMD-----------EDGSDDEDDSEEEEEAPKAETR 575
+A +G KP+P+ + G D E DDED+S +++++ E
Sbjct: 119 LANSG-------KPEPKEAGKSNAGKDSASGKQKVRIVEPTKDDEDESSDDDDSDMGEDE 171
Query: 576 RKRAHEVAPGPKTPVSAKKAKAEATPKKTEEKKKGGPATPH--PAKKGGNTPAT------ 731
PK AK+ KA++ K KK TP KKGG AT
Sbjct: 172 DDSDDSEEETPKKAEPAKRRKADSATKTPVTDKKAKLTTPQKTDGKKGGGHVATPHPSKQ 231
Query: 732 ATQSPKSASQVSCGSCKKTFNSSNALESHTKAKHSA 839
A+++PKSA C C ++F S AL+SH+KAKHSA
Sbjct: 232 ASKTPKSAGSHHCKPCNRSFGSEGALDSHSKAKHSA 267
>gi|269969912|gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum]
Length = 295
Score = 162 bits (409), Expect = 1e-037
Identities = 99/255 (38%), Positives = 138/255 (54%), Gaps = 29/255 (11%)
Frame = +3
Query: 69 MEFWGVEVQAGRPLKVTPEDGTLVHISHASLGDCKGKKGEAVTLNVKVGDKKFVMGTLLS 248
MEFWG EV++G PL V P DG ++H+S ASLG+ K K ++V L+V + KK V+GTL S
Sbjct: 1 MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKAQSVCLSVNIDGKKLVLGTLSS 60
Query: 249 ESIPQTCFDMLFDQEFELSHNWGKGSVHFVGFQCPNNKDDEGGEDFSDSEEEEEEEVAAT 428
+ +PQ FD++FD++FELSHNW GSV+F G++ N ++E ED D EEE +E++ T
Sbjct: 61 DKVPQQQFDLVFDRDFELSHNWKSGSVYFFGYKATNPFEEE--EDDEDDEEESDEDIPLT 118
Query: 429 VAANG----------------NAAKGVTKPKPEADDSDSEGMDEDGSDDEDDSEEEEEAP 560
+A NG ++A G K K D++ DED S DED+ E+E++
Sbjct: 119 IANNGKPEAKVKEAEKSNVAKDSASGKQKVKIVEPSKDAKADDEDESTDEDEMSEDEDSD 178
Query: 561 --KAETRRKRAHEVAPG----PKTPVSAKKAKAEATPKKTEEKKKGGPATPH--PAKKGG 716
+ E E G PK KK KA++ K KK TP KKG
Sbjct: 179 MGEGEDESDGDDESDEGEEETPKKAEPGKKRKADSATKTPVPDKKAKFVTPQKTDGKKGS 238
Query: 717 N---TPATATQSPKS 752
TP + Q+ KS
Sbjct: 239 GHVATPHPSKQAGKS 253
>gi|269969914|gb|ACZ54946.1| type 2 histone deacetylase b [Nicotiana tabacum]
Length = 294
Score = 161 bits (406), Expect = 2e-037
Identities = 102/273 (37%), Positives = 142/273 (52%), Gaps = 30/273 (10%)
Frame = +3
Query: 69 MEFWGVEVQAGRPLKVTPEDGTLVHISHASLGDCKGKKGEAVTLNVKVGDKKFVMGTLLS 248
MEFWG EV++G PL V P DG ++H+S ASLG+ K K ++V L+V + KK V+GTL S
Sbjct: 1 MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKVQSVCLSVNIDGKKLVLGTLNS 60
Query: 249 ESIPQTCFDMLFDQEFELSHNWGKGSVHFVGFQCPNNKDDEGGEDFSDSEEEEEEEVAAT 428
+ +PQ FD++FD++FELSHNW GSV+F G++ N ++E ED D EEE +E++ T
Sbjct: 61 DKVPQQQFDLVFDRDFELSHNWKNGSVYFFGYKATNPFEEE--EDDEDDEEESDEDIPLT 118
Query: 429 VAANG------------NAAK----GVTKPKPEADDSDSEGMDEDGSDDEDDSEEEEEAP 560
+A NG NAAK G K K D++ DED S DED+ E+E++
Sbjct: 119 IANNGKPEAKVKEAEKSNAAKDSASGKQKVKIVEPSKDAKADDEDESTDEDEMSEDEDSD 178
Query: 561 KAETRRKRAHEVAPGPKTPVSAKKAKAEATPKKTE--EKKKGGPATPHPA-KKGGNTPAT 731
E + + E TPKK E +K+K AT PA KK
Sbjct: 179 VGEGEDESDED---------DESDESEEETPKKAEPGKKRKADSATKTPADKKAKFVTPQ 229
Query: 732 ATQSPKSASQVSCGSCKKTFNSSNALESHTKAK 830
T K + V+ K S A ++ K
Sbjct: 230 KTDGKKGSGHVATPHPSKQAGKSPANKNQQTPK 262
>gi|224104989|ref|XP_002313645.1| histone deacetylase [Populus trichocarpa]
Length = 275
Score = 158 bits (398), Expect = 2e-036
Identities = 102/254 (40%), Positives = 137/254 (53%), Gaps = 13/254 (5%)
Frame = +3
Query: 63 SAMEFWGVEVQAGRPLKVTPEDGTLVHISHASLGDCKGKKGEAVTLNVKVGDKKFVMGTL 242
S+MEFWGVEV+AG PLKV P+D ++H+S A+LG+ K K E+V L VK +KK V+GTL
Sbjct: 2 SSMEFWGVEVKAGEPLKVEPKDFCMIHLSQAALGESK-KGNESVPLFVKFDEKKLVLGTL 60
Query: 243 LSESIPQTCFDMLFDQEFELSHNWGKGSVHFVGFQCPNNKDDEGGEDFSDSEEEEEEEVA 422
E+IPQ FD++F++EFELSHNW KGSV F G+Q D+ DFS EE+ E A
Sbjct: 61 SPENIPQLSFDLVFEKEFELSHNWKKGSVFFCGYQV---IPDDDASDFSGDEEDFEFAKA 117
Query: 423 ATVAANGNAAKGVTKPKPEAD------DSDSEGMDEDGSDDEDDSEEEEEAPKAETRRKR 584
+ A K KP+A D D + DED SD++ DSEE + ++ +
Sbjct: 118 DIMKAATAKDKAAKPEKPKATLVEPSIDDDEDDSDEDDSDEDGDSEEGMSLDE-DSDDES 176
Query: 585 AHEVAPGPKTPVSAKKAKAEATPKKTEEKKKGGPATPH--PAKKGGNTPATATQSPKSAS 758
E PK ++KK ++ K KK ATP AKK G + +A+
Sbjct: 177 DSEDEETPKKAETSKKRATDSATKTPVSSKKAKTATPQKTDAKKAGQVTPHPAKGKAAAN 236
Query: 759 QVSCGSCKKTFNSS 800
S S K N S
Sbjct: 237 GNSSKSPKSGGNFS 250
>gi|118482036|gb|ABK92949.1| unknown [Populus trichocarpa]
Length = 275
Score = 157 bits (396), Expect = 3e-036
Identities = 102/254 (40%), Positives = 137/254 (53%), Gaps = 13/254 (5%)
Frame = +3
Query: 63 SAMEFWGVEVQAGRPLKVTPEDGTLVHISHASLGDCKGKKGEAVTLNVKVGDKKFVMGTL 242
S+MEFWGVEV+AG PLKV P+D ++H+S A+LG+ K K E+V L VK +KK V+GTL
Sbjct: 2 SSMEFWGVEVKAGEPLKVEPKDFCMIHLSQAALGESK-KGNESVPLFVKFDEKKLVLGTL 60
Query: 243 LSESIPQTCFDMLFDQEFELSHNWGKGSVHFVGFQCPNNKDDEGGEDFSDSEEEEEEEVA 422
E+IPQ FD++F++EFELSHNW KGSV F G+Q D+ DFS EE+ E A
Sbjct: 61 SPENIPQLSFDLVFEKEFELSHNWKKGSVFFCGYQV---IPDDDASDFSGDEEDFEFAKA 117
Query: 423 ATVAANGNAAKGVTKPKPEAD------DSDSEGMDEDGSDDEDDSEEEEEAPKAETRRKR 584
+ A K KP+A D D + DED SD++ DSEE + ++ +
Sbjct: 118 DIMKAATAKDKAAKPEKPKATLVEPSIDDDEDDSDEDDSDEDGDSEEGMSLDE-DSDDES 176
Query: 585 AHEVAPGPKTPVSAKKAKAEATPKKTEEKKKGGPATP--HPAKKGGNTPATATQSPKSAS 758
E PK ++KK ++ K KK ATP AKK G + +A+
Sbjct: 177 DSEDEETPKKAETSKKRATDSATKTPVSSKKAKTATPLKTDAKKAGQVTPHPAKGKAAAN 236
Query: 759 QVSCGSCKKTFNSS 800
S S K N S
Sbjct: 237 GNSSKSPKSGGNFS 250
>gi|297808263|ref|XP_002872015.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 307
Score = 157 bits (395), Expect = 4e-036
Identities = 104/270 (38%), Positives = 140/270 (51%), Gaps = 40/270 (14%)
Frame = +3
Query: 75 FWGVEVQAGRPLKVTPEDGTLVHISHASLGDCKGKKGEAVTLNVKVGDKKFVMGTLLSES 254
+ G+EV+ G+P KVTPE+ +LVHIS ASL DCK K GE+V L V V K V+GTL E
Sbjct: 9 YLGIEVKPGKPTKVTPEEDSLVHISQASL-DCKVKSGESVVLTVTVDGTKLVIGTLSQEK 67
Query: 255 IPQTCFDMLFDQEFELSHNWGKGSVHFVGFQCPNNKDDEGGEDFSDSEEEEEEE-----V 419
PQ FD++F++EFE+SHN KG+VHFVG++ PN ED++ SEEE+ E V
Sbjct: 68 FPQISFDLVFEREFEISHNGTKGTVHFVGYRSPNIDH----EDYTSSEEEDVPEAVPAPV 123
Query: 420 AATVAANG-------NAAKGVTKP------------KPEADDSDSEGMDEDGSDDEDDSE 542
A VA NG N K +KP KPE++D + +ED S D+DDSE
Sbjct: 124 PAAVAVNGSAGAAASNVVKADSKPKAKPAEVKPAEVKPESEDDEDSSDEEDESADDDDSE 183
Query: 543 -----EEEEAPKAETRRKRAHEVAPGPKTPVSAKKAKAEATPKKTEEKKKGGPATPHPAK 707
+E+++ E + E P P++ KK E+T K KK PA A
Sbjct: 184 KGMDVDEDDSDDEEDESEEEEEETPKKPEPIN-KKRPNESTSKTPVSGKKAKPAAAPAA- 241
Query: 708 KGGNTPATATQSPKSASQVSCGSCKKTFNS 797
TP + K + KK+ S
Sbjct: 242 ----TPQKTEEKKKGGHTATPHPAKKSGKS 267
>gi|118481941|gb|ABK92903.1| unknown [Populus trichocarpa]
Length = 279
Score = 154 bits (388), Expect = 3e-035
Identities = 95/251 (37%), Positives = 129/251 (51%), Gaps = 13/251 (5%)
Frame = +3
Query: 60 LSAMEFWGVEVQAGRPLKVTPEDGTLVHISHASLGDCKGKKGEAVTLNVKVGDKKFVMGT 239
+S+MEFWGVEV+AG PLKV P+D ++H+S A+LG+ K E+V L +K+ +KK V+GT
Sbjct: 1 MSSMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGESSKKGNESVPLFLKLDEKKLVLGT 60
Query: 240 LLSESIPQTCFDMLFDQEFELSHNWGKGSVHFVGFQCPNNKDDEGGEDFSDSEEEEEEEV 419
L + IPQ FD++F++EFELSHNW GSV F G+Q ++D DFSD +E E
Sbjct: 61 LSPDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAIPEND---SDFSDDGDEIPFEK 117
Query: 420 AATVAANGNAAKGVTKPKPEAD------DSDSEGMDEDGSDDEDDSEEEEEAPKAE--TR 575
V K KP+A+ D +S+ D D DEDDS + E E
Sbjct: 118 VENVKFATGTDKAAKPEKPKANPVVPSKDDESDDDDSDDDSDEDDSGDGSEGMSLEEDLD 177
Query: 576 RKRAHEVAPGPKTPVSAKKAKAEATPKKTEEKKKGGPATPHPAKKGGNTPATATQSPKSA 755
+ E PK +KK +++ K KK ATP K G T P
Sbjct: 178 DESDSEDEETPKKAEQSKKRTSDSAIKTPVSSKKAKTATPQ--KTDGGKAGQVTPHPAKG 235
Query: 756 SQVSCGSCKKT 788
S G+ KT
Sbjct: 236 KAASNGNNPKT 246
>gi|118482528|gb|ABK93186.1| unknown [Populus trichocarpa]
Length = 279
Score = 154 bits (388), Expect = 3e-035
Identities = 95/251 (37%), Positives = 129/251 (51%), Gaps = 13/251 (5%)
Frame = +3
Query: 60 LSAMEFWGVEVQAGRPLKVTPEDGTLVHISHASLGDCKGKKGEAVTLNVKVGDKKFVMGT 239
+S+MEFWGVEV+AG PLKV P+D ++H+S A+LG+ K E+V L +K+ +KK V+GT
Sbjct: 1 MSSMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGESSKKGNESVPLFLKLDEKKLVLGT 60
Query: 240 LLSESIPQTCFDMLFDQEFELSHNWGKGSVHFVGFQCPNNKDDEGGEDFSDSEEEEEEEV 419
L + IPQ FD++F++EFELSHNW GSV F G+Q ++D DFSD +E E
Sbjct: 61 LSPDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAIPEND---SDFSDDGDEIPFEK 117
Query: 420 AATVAANGNAAKGVTKPKPEAD------DSDSEGMDEDGSDDEDDSEEEEEAPKAE--TR 575
V K KP+A+ D +S+ D D DEDDS + E E
Sbjct: 118 VENVKFATGTDKAAKPEKPKANPVVPSKDDESDDDDSDDDSDEDDSGDGSEGMSLEEDLD 177
Query: 576 RKRAHEVAPGPKTPVSAKKAKAEATPKKTEEKKKGGPATPHPAKKGGNTPATATQSPKSA 755
+ E PK +KK +++ K KK ATP K G T P
Sbjct: 178 DESDSEDEETPKKAEQSKKRTSDSAIKTPVSSKKAKTATPQ--KTDGGKAGQVTPHPAKG 235
Query: 756 SQVSCGSCKKT 788
S G+ KT
Sbjct: 236 EAASNGNNPKT 246
>gi|224131666|ref|XP_002328078.1| histone deacetylase [Populus trichocarpa]
Length = 260
Score = 154 bits (388), Expect = 3e-035
Identities = 95/251 (37%), Positives = 129/251 (51%), Gaps = 13/251 (5%)
Frame = +3
Query: 60 LSAMEFWGVEVQAGRPLKVTPEDGTLVHISHASLGDCKGKKGEAVTLNVKVGDKKFVMGT 239
+S+MEFWGVEV+AG PLKV P+D ++H+S A+LG+ K E+V L +K+ +KK V+GT
Sbjct: 1 MSSMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGESSKKGNESVPLFLKLDEKKLVLGT 60
Query: 240 LLSESIPQTCFDMLFDQEFELSHNWGKGSVHFVGFQCPNNKDDEGGEDFSDSEEEEEEEV 419
L + IPQ FD++F++EFELSHNW GSV F G+Q ++D DFSD +E E
Sbjct: 61 LSPDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAIPEND---SDFSDDGDEIPFEK 117
Query: 420 AATVAANGNAAKGVTKPKPEAD------DSDSEGMDEDGSDDEDDSEEEEEAPKAE--TR 575
V K KP+A+ D +S+ D D DEDDS + E E
Sbjct: 118 VENVKFATGTDKAAKPEKPKANPVVPSKDDESDDDDSDDDSDEDDSGDGSEGMSLEEDLD 177
Query: 576 RKRAHEVAPGPKTPVSAKKAKAEATPKKTEEKKKGGPATPHPAKKGGNTPATATQSPKSA 755
+ E PK +KK +++ K KK ATP K G T P
Sbjct: 178 DESDSEDEETPKKAEQSKKRTSDSAIKTPVSSKKAKTATPQ--KTDGGKAGQVTPHPAKG 235
Query: 756 SQVSCGSCKKT 788
S G+ KT
Sbjct: 236 KAASNGNNPKT 246
>gi|269969916|gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum]
Length = 282
Score = 153 bits (386), Expect = 4e-035
Identities = 100/266 (37%), Positives = 139/266 (52%), Gaps = 22/266 (8%)
Frame = +3
Query: 69 MEFWGVEVQAGRPLKVTPEDGTLVHISHASLGDCKGKKG-EAVTLNVKVGDKKFVMGTLL 245
MEFWG EV++G+PL V P D ++H+S ASLG+ K KG E V L+V V KK +GTL
Sbjct: 1 MEFWGAEVKSGQPLTVQPGDDMVLHLSQASLGEAKKDKGSEPVCLSVNVDGKKLALGTLN 60
Query: 246 SESIPQTCFDMLFDQEFELSHNWGKGSVHFVGFQCPNNKDDEGGEDFSDSEEEEEEEVAA 425
+ +PQ FD++FD++FELSHNW GSV+F G++ N + E + E+E +EE+
Sbjct: 61 LDKLPQQQFDLVFDRDFELSHNWKNGSVYFFGYKAANPYEQE------EDEDESDEEIPL 114
Query: 426 TVAANG---------NAAKGVTKPKPEADDSDSEGMDEDGSDDEDDSEEEEEAPKAETRR 578
T+A G ++A G K K D++ DED S DEDD+ E+EE +
Sbjct: 115 TLANTGKSEAKASANDSASGKQKVKIAEPSKDAKADDEDDSSDEDDTSEDEEDSEMGEDE 174
Query: 579 KRAHEVAPGPKTPVSA---KKAKAEATPKKTEEKKKGGPATPH--PAKKGGNTPATATQS 743
+ E +TP A KK +++ K KK ATP KKG AT S
Sbjct: 175 DDSDEDQSDEETPKKAEPSKKRPSDSAIKTPAPDKKAKFATPQKTDGKKGAVHVATPHPS 234
Query: 744 PKSASQVSCGSCKKTFNSSNALESHT 821
K A + S +T S +L T
Sbjct: 235 -KQAGKTSGNKSNQTPKSGGSLACKT 259
>gi|30688577|ref|NP_851056.1| histone deacetylase HDT2 [Arabidopsis thaliana]
Length = 306
Score = 144 bits (363), Expect = 2e-032
Identities = 82/178 (46%), Positives = 110/178 (61%), Gaps = 19/178 (10%)
Frame = +3
Query: 72 EFWGVEVQAGRPLKVTPEDGTLVHISHASLGDCKGKKGEAVTLNVKVGDKKFVMGTLLSE 251
EFWGV V KVTPE+ +LVHIS ASL DC K GE+V L+V VG K V+GTL +
Sbjct: 2 EFWGVAVTPKNATKVTPEEDSLVHISQASL-DCTVKSGESVVLSVTVGGAKLVIGTLSQD 60
Query: 252 SIPQTCFDMLFDQEFELSHNWGKGSVHFVGFQCPNNKDDEGGEDFSDSEEEEEEEVA--- 422
PQ FD++FD+EFELSH+ K +VHF+G++ PN + D DF+ S++E+ E
Sbjct: 61 KFPQISFDLVFDKEFELSHSGTKANVHFIGYKSPNIEQD----DFTSSDDEDVPEAVPAP 116
Query: 423 --ATVAANGNAAKGVTK--PKPEADDSD-------SEGMDEDGSDDEDDSEEEEEAPK 563
V ANGNA V K KP+A ++ E +ED SDDED+SEE++++ K
Sbjct: 117 APTAVTANGNAGAAVVKADTKPKAKPAEVKPAEEKPESDEEDESDDEDESEEDDDSEK 174
>gi|145358319|ref|NP_197657.3| histone deacetylase HDT2 [Arabidopsis thaliana]
Length = 305
Score = 144 bits (363), Expect = 2e-032
Identities = 82/178 (46%), Positives = 110/178 (61%), Gaps = 19/178 (10%)
Frame = +3
Query: 72 EFWGVEVQAGRPLKVTPEDGTLVHISHASLGDCKGKKGEAVTLNVKVGDKKFVMGTLLSE 251
EFWGV V KVTPE+ +LVHIS ASL DC K GE+V L+V VG K V+GTL +
Sbjct: 2 EFWGVAVTPKNATKVTPEEDSLVHISQASL-DCTVKSGESVVLSVTVGGAKLVIGTLSQD 60
Query: 252 SIPQTCFDMLFDQEFELSHNWGKGSVHFVGFQCPNNKDDEGGEDFSDSEEEEEEEVA--- 422
PQ FD++FD+EFELSH+ K +VHF+G++ PN + D DF+ S++E+ E
Sbjct: 61 KFPQISFDLVFDKEFELSHSGTKANVHFIGYKSPNIEQD----DFTSSDDEDVPEAVPAP 116
Query: 423 --ATVAANGNAAKGVTK--PKPEADDSD-------SEGMDEDGSDDEDDSEEEEEAPK 563
V ANGNA V K KP+A ++ E +ED SDDED+SEE++++ K
Sbjct: 117 APTAVTANGNAGAAVVKADTKPKAKPAEVKPAEEKPESDEEDESDDEDESEEDDDSEK 174
>gi|81074563|gb|ABB55369.1| histone deacetylase 2a-like [Solanum tuberosum]
Length = 203
Score = 144 bits (362), Expect = 3e-032
Identities = 79/200 (39%), Positives = 114/200 (57%), Gaps = 6/200 (3%)
Frame = +3
Query: 69 MEFWGVEVQAGRPLKVTPEDGTLVHISHASLGDCKGKKGEAVTLNVKVGDKKFVMGTLLS 248
MEFWG EV++G PL V P DG ++H+S ASLG+ K K E+V L+V + KK V+GTL S
Sbjct: 1 MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKSESVCLSVNIDGKKLVLGTLNS 60
Query: 249 ESIPQTCFDMLFDQEFELSHNWGKGSVHFVGFQCPNNKDDEGGEDFSDSEEEEEEEVAAT 428
E +PQ FD++FD++FELSHN GSV+F G++ N ++E ED D +E +E++ T
Sbjct: 61 EKVPQQQFDLVFDRDFELSHNLKSGSVYFFGYKATNPFEEE--EDDEDDYDESDEDIPLT 118
Query: 429 VAANG----NAAKGVTKPKPEADDSDSEGMDEDGSDDEDDSEEEEEAPKAETRRKRAHEV 596
+A +G A K A + E DDED+S +++++ E
Sbjct: 119 LANSGKPEPKEAGKSNAGKDSASGKQKVRIVEPTKDDEDESSDDDDSELGEDEDDSDDSE 178
Query: 597 APGPKTPVSAKKAKAEATPK 656
PK AKK KA++ K
Sbjct: 179 EETPKKAEPAKKRKADSATK 198
>gi|255638252|gb|ACU19439.1| unknown [Glycine max]
Length = 288
Score = 142 bits (356), Expect = 1e-031
Identities = 88/226 (38%), Positives = 122/226 (53%), Gaps = 20/226 (8%)
Frame = +3
Query: 69 MEFWGVEVQAGRPLKVTPEDGTLVHISHASLGD-CKGKKGEAVTLNVKVGDKKFVMGTLL 245
MEFWGVEV++G LKV P D ++H+S+A LGD K K+G V L VK G++K V+GTL
Sbjct: 1 MEFWGVEVKSGESLKVDPGDDKIIHLSNACLGDVTKDKEGLPVALYVKFGNQKLVLGTLS 60
Query: 246 SESIPQTCFDMLFDQEFELSHNWGKGSVHFVGFQCPNNKDDEGGEDFSDSEEEEEEEVAA 425
SE+ PQ +D++F++EFELSHNW GSV F GF+ + + + ED D +E+
Sbjct: 61 SEAFPQISYDLVFEKEFELSHNWKHGSVFFTGFKAQSQSESDNDEDSDDFDED-----IP 115
Query: 426 TVAANGNAAKGVTKP-KPEADDSD----SEGMDEDGSDDE--DDSEEEEEAPKAETRRKR 584
AANG V KP+A+++ + G DED S+ E DDS E++ +
Sbjct: 116 VSAANGKPEIEVKNGIKPDANEAKQKKIANGEDEDSSESESDDDSSEDQLTANGDIESSE 175
Query: 585 AHEVAPGPKTPVSAKKAKAEATPKKTEEKKKGG----PATPHPAKK 710
+ + + E TPKK E K G TP P KK
Sbjct: 176 GDDDSDDEE---EGDDESDEETPKKIEASNKRGIDSSKKTPVPVKK 218
>gi|84468402|dbj|BAE71284.1| putative histone deacetylase [Trifolium pratense]
Length = 304
Score = 131 bits (329), Expect = 2e-028
Identities = 80/229 (34%), Positives = 115/229 (50%), Gaps = 5/229 (2%)
Frame = +3
Query: 69 MEFWGVEVQAGRPLKVTPEDGTLVHISHASLGD-CKGKKGEAVTLNVKVGDKKFVMGTLL 245
MEFWG EV++G LKV PED ++H+S A LG+ K K GE V+L VK+ ++K +GTL
Sbjct: 1 MEFWGTEVKSGESLKVEPEDDKIIHLSAACLGEVSKDKGGEPVSLYVKIDNQKLQLGTLS 60
Query: 246 SESIPQTCFDMLFDQEFELSHNWGKGSVHFVGFQCPNNKDDEGGEDFSDSEEEEEEEVAA 425
SE IPQ FD++F++EFELSHNW GS+ F GF+ + + ED DS EE+ AA
Sbjct: 61 SEKIPQISFDLVFEKEFELSHNWKYGSIFFTGFKMESLLVSDDDEDSDDSIEEDNPVNAA 120
Query: 426 TVAANGNAAKGVTKPKPEADDSDSEGMDEDGSDDEDDSEEEEEAPKAETRRKRAHEVAPG 605
G EA + + + D E+D ++E +ET +
Sbjct: 121 NGKPEVEVKNGAKPGVNEAQQNKTSDPKKKQKDIENDVSADDEEDSSET----DSDEDSS 176
Query: 606 PKTPVSAKKAKAEATPKKTEEKKKGGPATPHPAKKGGNTPATATQSPKS 752
PV+ + ++ +EE + P K G T A S K+
Sbjct: 177 EDEPVANGQIESSDDEDDSEEDDEDSDDEETPKKTEGGTKRVAESSKKT 225
>gi|145357606|ref|NP_195994.3| histone deacetylase HDT3 [Arabidopsis thaliana]
Length = 294
Score = 124 bits (309), Expect = 4e-026
Identities = 84/235 (35%), Positives = 117/235 (49%), Gaps = 21/235 (8%)
Frame = +3
Query: 69 MEFWGVEVQAGRPLKVTPEDGTLVHISHASLGDCKGKKGEAVTLNVKVGDKKFVMGTLLS 248
MEFWGVEV+ G+PL + P LVHIS +LG+ K E + L V VG K ++GTL
Sbjct: 1 MEFWGVEVKNGKPLHLDPGLDRLVHISQVALGESKNNVTEPIQLYVTVGSDKLLIGTLSH 60
Query: 249 ESIPQTCFDMLFDQEFELSHNWGKGSVHFVGFQCPNNKDDEGGEDFSDSEEEEEEEVAAT 428
E PQ +++ ++ F LSH W GSV F G++ + D ED D ++ E A
Sbjct: 61 EKFPQLSTEIVLERNFALSHTWKNGSVFFSGYKV--DASDPEPEDLID----DQLEAAGF 114
Query: 429 VAANGNAAKGVTKPKPEAD-----DSDSEGMDEDGSDDED---DSEEEEEAPKAETRRKR 584
AA +AAK V P D D D++G +ED SDD+D +EEEE AE+
Sbjct: 115 KAAPKSAAKQVNFQLPNEDVKAKQDDDADGSEEDSSDDDDSENSGDEEEEKVTAES---- 170
Query: 585 AHEVAPGPKTPVSAKKAKAEATPKKTEEKKKGGPATPHPAKKGGNTPATATQSPK 749
+ + + E TPKK EE KK A P+ +K + +P+
Sbjct: 171 --DSEEDDSSDDEEDDSSEEETPKKPEEPKKRS-AEPNSSKNPASNKKAKFVTPQ 222
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,844,195,214,508
Number of Sequences: 15229318
Number of Extensions: 2844195214508
Number of Successful Extensions: 670869000
Number of sequences better than 0.0: 0
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