BLASTX 7.6.2
Query= UN23467 /QuerySize=969
(968 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O82204|RL281_ARATH 60S ribosomal protein L28-1 OS=Arabidopsis... 256 3e-067
sp|Q9M0E2|RL282_ARATH 60S ribosomal protein L28-2 OS=Arabidopsis... 250 1e-065
sp|Q9ZR03|UCRIA_ARATH Cytochrome b6-f complex iron-sulfur subuni... 117 1e-025
sp|Q962T2|RL28_SPOFR 60S ribosomal protein L28 OS=Spodoptera fru... 80 1e-014
sp|Q3T0L7|RL28_BOVIN 60S ribosomal protein L28 OS=Bos taurus GN=... 72 4e-012
sp|P46779|RL28_HUMAN 60S ribosomal protein L28 OS=Homo sapiens G... 72 4e-012
sp|P41105|RL28_MOUSE 60S ribosomal protein L28 OS=Mus musculus G... 72 4e-012
sp|P26291|UCRIA_PEA Cytochrome b6-f complex iron-sulfur subunit,... 70 3e-011
sp|P17702|RL28_RAT 60S ribosomal protein L28 OS=Rattus norvegicu... 67 2e-010
sp|P08980|UCRIA_SPIOL Cytochrome b6-f complex iron-sulfur subuni... 63 3e-009
sp|P30361|UCRIA_TOBAC Cytochrome b6-f complex iron-sulfur subuni... 61 9e-009
sp|Q02585|UCRIB_TOBAC Cytochrome b6-f complex iron-sulfur subuni... 60 2e-008
sp|Q21930|RL28_CAEEL 60S ribosomal protein L28 OS=Caenorhabditis... 57 1e-007
sp|O49078|UCRIA_FRIAG Cytochrome b6-f complex iron-sulfur subuni... 55 9e-007
sp|Q69GY7|UCRIA_SOLTU Cytochrome b6-f complex iron-sulfur subuni... 52 4e-006
>sp|O82204|RL281_ARATH 60S ribosomal protein L28-1 OS=Arabidopsis thaliana
GN=RPL28A PE=1 SV=1
Length = 143
Score = 256 bits (652), Expect = 3e-067
Identities = 128/143 (89%), Positives = 135/143 (94%)
Frame = +3
Query: 324 MATVPGQLVWEIVKRNNCFLVKQFGRGNAKVQFSKEKNNLCNLNSYKHSGLANKKTVTIQ 503
MATVPGQL+WEIVK NNCFLVKQFGRGN+KVQFSKE NNL N++SYKHSGLANKKTVTIQ
Sbjct: 1 MATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQ 60
Query: 504 PADKEQGVVLATTKTKKQNKPKVSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKFALA 683
ADK+Q VVLATTKTKKQNKPK+SVNKSILKKEFPRMSKAVANQVVDNYYRPDLKK ALA
Sbjct: 61 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALA 120
Query: 684 RLSVISKSIRVAKSGAKQRNRQA 752
RLS ISK +RVAKSGAKQRNRQA
Sbjct: 121 RLSAISKGLRVAKSGAKQRNRQA 143
>sp|Q9M0E2|RL282_ARATH 60S ribosomal protein L28-2 OS=Arabidopsis thaliana
GN=RPL28C PE=2 SV=1
Length = 143
Score = 250 bits (638), Expect = 1e-065
Identities = 125/143 (87%), Positives = 132/143 (92%)
Frame = +3
Query: 324 MATVPGQLVWEIVKRNNCFLVKQFGRGNAKVQFSKEKNNLCNLNSYKHSGLANKKTVTIQ 503
MATVPGQL+WEIVKRNNCFLVKQFGRGNAKVQFSKE NNL N+NSYKHSGLANKKTVTIQ
Sbjct: 1 MATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKKTVTIQ 60
Query: 504 PADKEQGVVLATTKTKKQNKPKVSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKFALA 683
A K+QGVVL TTKTK+QNKPK+SVNKSILKKEF RMSK VANQVVDNYYRPDLKK ALA
Sbjct: 61 AAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLKKAALA 120
Query: 684 RLSVISKSIRVAKSGAKQRNRQA 752
RLS ISK +RVAKSG K+RNRQA
Sbjct: 121 RLSAISKGLRVAKSGPKRRNRQA 143
>sp|Q9ZR03|UCRIA_ARATH Cytochrome b6-f complex iron-sulfur subunit,
chloroplastic OS=Arabidopsis thaliana GN=petC PE=1 SV=1
Length = 229
Score = 117 bits (293), Expect = 1e-025
Identities = 62/77 (80%), Positives = 71/77 (92%), Gaps = 2/77 (2%)
Frame = +3
Query: 36 MASSPISPATQLGSSRSATMLAMSRGMMFVKPTRTSHQMVRKEKIGLRIACQATSIPADN 215
MASS +SPATQLGSSRSA ++AMS G +FVKPT+ +HQMVRKEKIGLRI+CQA+SIPAD
Sbjct: 1 MASSSLSPATQLGSSRSA-LMAMSSG-LFVKPTKMNHQMVRKEKIGLRISCQASSIPADR 58
Query: 216 VPDMEKRKTLNLLLVGA 266
VPDMEKRKTLNLLL+GA
Sbjct: 59 VPDMEKRKTLNLLLLGA 75
>sp|Q962T2|RL28_SPOFR 60S ribosomal protein L28 OS=Spodoptera frugiperda
GN=RpL28 PE=2 SV=1
Length = 139
Score = 80 bits (197), Expect = 1e-014
Identities = 49/127 (38%), Positives = 65/127 (51%), Gaps = 3/127 (2%)
Frame = +3
Query: 345 LVWEIVKRNNCFLVKQFGRGNAKVQFSKEKNNLCNLNSYKHSGLANKKTVTIQPADKEQG 524
L W I++ NN FLVK + N K FSKE NN+ NLNSY+++GL KK V + +G
Sbjct: 5 LNWMIIRNNNAFLVK---KRNIKKPFSKEPNNVTNLNSYRYNGLIQKKAVGVVENPDRKG 61
Query: 525 VVLATTKTKKQNKPKVSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKFALARLSVISK 704
+ K K NKP + + K R V + N+YR DL K L R S I +
Sbjct: 62 FTVVYKKAKATNKPAKNAVRRQFKAGARRSLYKVKRLLKANHYRTDLSKATLRRASAILR 121
Query: 705 SIRVAKS 725
S R K+
Sbjct: 122 SQRPIKA 128
>sp|Q3T0L7|RL28_BOVIN 60S ribosomal protein L28 OS=Bos taurus GN=RPL28 PE=2
SV=3
Length = 137
Score = 72 bits (176), Expect = 4e-012
Identities = 39/119 (32%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Frame = +3
Query: 351 WEIVKRNNCFLVKQFGRGNAKVQFSKEKNNLCNLNSYKHSGLANKKTVTIQPADKEQGVV 530
W +V+ + FL+K+ K +S E NNL NS++++GL ++KTV ++PA +GVV
Sbjct: 7 WMVVRNCSSFLIKR-----NKQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKGVV 61
Query: 531 LATTKTKKQNKPKVSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKFALARLSVISKS 707
+ + Q KP S ++ + K ++ + + N YRPDL+ A+ R S I +S
Sbjct: 62 VVMKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILRS 120
>sp|P46779|RL28_HUMAN 60S ribosomal protein L28 OS=Homo sapiens GN=RPL28 PE=1
SV=3
Length = 137
Score = 72 bits (176), Expect = 4e-012
Identities = 39/119 (32%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Frame = +3
Query: 351 WEIVKRNNCFLVKQFGRGNAKVQFSKEKNNLCNLNSYKHSGLANKKTVTIQPADKEQGVV 530
W +V+ + FL+K+ K +S E NNL NS++++GL ++KTV ++PA +GVV
Sbjct: 7 WMVVRNCSSFLIKR-----NKQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKGVV 61
Query: 531 LATTKTKKQNKPKVSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKFALARLSVISKS 707
+ + Q KP S ++ + K ++ + + N YRPDL+ A+ R S I +S
Sbjct: 62 VVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILRS 120
>sp|P41105|RL28_MOUSE 60S ribosomal protein L28 OS=Mus musculus GN=Rpl28 PE=1
SV=2
Length = 137
Score = 72 bits (176), Expect = 4e-012
Identities = 39/119 (32%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Frame = +3
Query: 351 WEIVKRNNCFLVKQFGRGNAKVQFSKEKNNLCNLNSYKHSGLANKKTVTIQPADKEQGVV 530
W +V+ + FL+K+ K +S E NNL NS++++GL ++KTV ++PA +GVV
Sbjct: 7 WMVVRNCSSFLIKR-----NKQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKGVV 61
Query: 531 LATTKTKKQNKPKVSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKFALARLSVISKS 707
+ + Q KP S ++ + K ++ + + N YRPDL+ A+ R S I +S
Sbjct: 62 VVMKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILRS 120
>sp|P26291|UCRIA_PEA Cytochrome b6-f complex iron-sulfur subunit, chloroplastic
OS=Pisum sativum GN=petC PE=2 SV=1
Length = 230
Score = 70 bits (169), Expect = 3e-011
Identities = 42/77 (54%), Positives = 52/77 (67%), Gaps = 6/77 (7%)
Frame = +3
Query: 42 SSPISPAT--QLGSSRSATMLAMSRGMMFVKPTRTSHQMVRKEKIGLRIACQATSIPADN 215
S+ +SP T QL S +S ++ + VKPTRT QM + G++I CQATSIPAD
Sbjct: 3 STTLSPTTPSQLCSGKSG--ISCPSIALLVKPTRT--QMTGRGNKGMKITCQATSIPADR 58
Query: 216 VPDMEKRKTLNLLLVGA 266
VPDM KRKTLNLLL+GA
Sbjct: 59 VPDMSKRKTLNLLLLGA 75
>sp|P17702|RL28_RAT 60S ribosomal protein L28 OS=Rattus norvegicus GN=Rpl28 PE=1
SV=4
Length = 137
Score = 67 bits (162), Expect = 2e-010
Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Frame = +3
Query: 351 WEIVKRNNCFLVKQFGRGNAKVQFSKEKNNLCNLNSYKHSGLANKKTVTIQPADKEQGVV 530
W +V+ + FL+K+ K +S E NNL NS++++GL ++KTV ++ +GVV
Sbjct: 7 WMVVRNCSSFLIKR-----NKQTYSTEPNNLKARNSFRYNGLIHRKTVGVEAWPDGKGVV 61
Query: 531 LATTKTKKQNKPKVSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKFALARLSVISKS 707
+ + Q KP S ++ + K ++ + + N YRPDL+ A+ R S I +S
Sbjct: 62 VVMKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILRS 120
>sp|P08980|UCRIA_SPIOL Cytochrome b6-f complex iron-sulfur subunit,
chloroplastic OS=Spinacia oleracea GN=petC PE=1 SV=2
Length = 230
Score = 63 bits (151), Expect = 3e-009
Identities = 42/79 (53%), Positives = 56/79 (70%), Gaps = 7/79 (8%)
Frame = +3
Query: 39 ASSPISPAT--QLGSSRSATMLAMSRGMMFVKPTRTSHQMVRKEKI-GLRIACQATSIPA 209
AS +S AT QL SS++ M A S + K R + ++ KE+I G+++ CQATSIPA
Sbjct: 2 ASFTLSSATPSQLCSSKNG-MFAPS--LALAKAGRV-NVLISKERIRGMKLTCQATSIPA 57
Query: 210 DNVPDMEKRKTLNLLLVGA 266
DNVPDM+KR+TLNLLL+GA
Sbjct: 58 DNVPDMQKRETLNLLLLGA 76
>sp|P30361|UCRIA_TOBAC Cytochrome b6-f complex iron-sulfur subunit 1,
chloroplastic OS=Nicotiana tabacum GN=petC1 PE=2 SV=2
Length = 228
Score = 61 bits (147), Expect = 9e-009
Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 4/76 (5%)
Frame = +3
Query: 42 SSPISPATQLGSSRSATMLAMSRGMMFVKPTRTSHQMVRKEKIGLRIACQATSIPADN-V 218
SS +SP TQL SS+S L+ + VKP + + + K+K +++ C ATSIPAD+ V
Sbjct: 3 SSTLSPVTQLCSSKSG--LSSVSQCLLVKPMKINSHGLGKDK-RMKVKCMATSIPADDRV 59
Query: 219 PDMEKRKTLNLLLVGA 266
PDMEKR +NLLL+GA
Sbjct: 60 PDMEKRNLMNLLLLGA 75
>sp|Q02585|UCRIB_TOBAC Cytochrome b6-f complex iron-sulfur subunit 2,
chloroplastic OS=Nicotiana tabacum GN=petC2 PE=2 SV=1
Length = 228
Score = 60 bits (144), Expect = 2e-008
Identities = 36/76 (47%), Positives = 51/76 (67%), Gaps = 4/76 (5%)
Frame = +3
Query: 42 SSPISPATQLGSSRSATMLAMSRGMMFVKPTRTSHQMVRKEKIGLRIACQATSIPADN-V 218
SS +SP TQL SS+S L+ + +KP + + + K+K +++ C ATSIPAD+ V
Sbjct: 3 SSTLSPVTQLCSSKSG--LSSVSQCLLLKPMKINSHGLGKDK-RMKVKCMATSIPADDRV 59
Query: 219 PDMEKRKTLNLLLVGA 266
PDMEKR +NLLL+GA
Sbjct: 60 PDMEKRNLMNLLLLGA 75
>sp|Q21930|RL28_CAEEL 60S ribosomal protein L28 OS=Caenorhabditis elegans
GN=rpl-28 PE=1 SV=3
Length = 126
Score = 57 bits (137), Expect = 1e-007
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 7/85 (8%)
Frame = +3
Query: 345 LVWEIVKRNNCFLVKQFGRGNAKVQFSKEKNNLCNLNSYKHSGLANKKTVTIQPADKEQG 524
LVW++++ N+ FL Q G G +FS EK NL +NS K+SGLANK + + A K G
Sbjct: 5 LVWQVIRNNSAFLRTQRGIGK---RFSTEKFNLKKVNSPKYSGLANKHAIDVSAAAK--G 59
Query: 525 VVLATTKTKKQNKPKVSVNKSILKK 599
VV++T K +P +V S L K
Sbjct: 60 VVVSTKNEK--GRPAKAVTTSTLSK 82
>sp|O49078|UCRIA_FRIAG Cytochrome b6-f complex iron-sulfur subunit,
chloroplastic OS=Fritillaria agrestis GN=petC PE=2 SV=1
Length = 230
Score = 55 bits (130), Expect = 9e-007
Identities = 24/36 (66%), Positives = 30/36 (83%)
Frame = +3
Query: 159 KEKIGLRIACQATSIPADNVPDMEKRKTLNLLLVGA 266
KE + ++ CQATSIPAD VPDM KR+T+NLLL+GA
Sbjct: 41 KEMVSRKVTCQATSIPADRVPDMGKRQTMNLLLLGA 76
>sp|Q69GY7|UCRIA_SOLTU Cytochrome b6-f complex iron-sulfur subunit,
chloroplastic OS=Solanum tuberosum GN=petC PE=2 SV=1
Length = 230
Score = 52 bits (124), Expect = 4e-006
Identities = 38/82 (46%), Positives = 55/82 (67%), Gaps = 6/82 (7%)
Frame = +3
Query: 36 MASSPISPAT--QLGSSRSATMLAMSRGMMFVKPTRTSHQMVRKEKIGLRIACQATSIPA 209
MASS +S T QL SS+S + ++S+ ++ VKP + + + K+K ++ C A SIPA
Sbjct: 1 MASSTLSHVTPSQLCSSKSG-VSSVSQALL-VKPMKINGHGMGKDK-RMKAKCMAASIPA 57
Query: 210 DN-VPDMEKRKTLNLLLVGAPA 272
D+ VPDMEKR +NLLL+GA A
Sbjct: 58 DDRVPDMEKRNLMNLLLLGALA 79
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,767,994,010
Number of Sequences: 518415
Number of Extensions: 98767994010
Number of Successful Extensions: 632508636
Number of sequences better than 0.0: 0
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