BLASTX 7.6.2
Query= UN23510 /QuerySize=1189
(1188 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|10177849|dbj|BAB11201.1| unnamed protein product [Arabidopsis... 502 8e-140
gi|18420800|ref|NP_568447.1| putative 30S ribosomal protein [Ara... 497 3e-138
gi|297808465|ref|XP_002872116.1| hypothetical protein ARALYDRAFT... 496 5e-138
gi|255566888|ref|XP_002524427.1| Plastid-specific 30S ribosomal ... 374 2e-101
gi|118488335|gb|ABK95986.1| unknown [Populus trichocarpa] 370 4e-100
gi|224118512|ref|XP_002317839.1| predicted protein [Populus tric... 369 8e-100
gi|224134949|ref|XP_002321945.1| predicted protein [Populus tric... 357 2e-096
gi|225455215|ref|XP_002271324.1| PREDICTED: hypothetical protein... 356 6e-096
gi|302143982|emb|CBI23087.3| unnamed protein product [Vitis vini... 351 2e-094
gi|51457950|gb|AAU03364.1| chloroplast-specific ribosomal protei... 347 3e-093
gi|258611172|gb|ACV83721.1| chloroplast ribosomal protein [Solan... 346 8e-093
gi|134034|sp|P19954.2|RR30_SPIOL RecName: Full=30S ribosomal pro... 336 5e-090
gi|170131|gb|AAA34039.1| ribosomal protein 30S subunit [Spinacia... 336 5e-090
gi|242037341|ref|XP_002466065.1| hypothetical protein SORBIDRAFT... 279 7e-073
gi|226528966|ref|NP_001151285.1| plastid-specific 30S ribosomal ... 278 1e-072
gi|168011837|ref|XP_001758609.1| predicted protein [Physcomitrel... 252 1e-064
gi|118489730|gb|ABK96666.1| unknown [Populus trichocarpa x Popul... 251 3e-064
gi|227070|prf||1613445A ribosomal protein CS-S5 217 3e-054
gi|148907338|gb|ABR16805.1| unknown [Picea sitchensis] 188 2e-045
gi|115456699|ref|NP_001051950.1| Os03g0856500 [Oryza sativa Japo... 187 3e-045
>gi|10177849|dbj|BAB11201.1| unnamed protein product [Arabidopsis thaliana]
Length = 365
Score = 502 bits (1290), Expect = 8e-140
Identities = 265/323 (82%), Positives = 280/323 (86%), Gaps = 8/323 (2%)
Frame = -1
Query: 1179 FTNNL*ISLSLKSNQMTTLLGFSHTKLPHCNVSITSPTCPSSSTVVSMVG-RRSDSKTLR 1003
F+ I SL +QM TLLGFS TK HC V I++P C SSSTVVSMVG R+DSK LR
Sbjct: 43 FSEESKICESLSLSQMATLLGFSQTKFHHCGVWISTPPCSSSSTVVSMVGLNRTDSKKLR 102
Query: 1002 SGFLGRITHHDR--LPSTGRRSSSTVKMSWDGSLASVKLIIQGKNLELSEAIKQHVEDKV 829
S FLG+I + DR + + RSS VKMSWDG LASVKLIIQGKNLELSE IKQHVE+KV
Sbjct: 103 SDFLGQIGYEDRRQVRHSYCRSSLAVKMSWDGPLASVKLIIQGKNLELSEPIKQHVEEKV 162
Query: 828 GKAVQKHSHLVREVDVRLSVRGGEFGKGPKIRRCEVTLFTKKHGVVRGEEDAETVYACID 649
GK+VQKHSHLVREVDVRLSVRGGEFGKGP+IRRCEVTLFTKKHGVVR EEDAETVYACID
Sbjct: 163 GKSVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYACID 222
Query: 648 LVSTIIQRKLRKIKEKDSDHGRHMKGFNRSKVREPVIEPVVEDPED-----VAGEEEEDD 484
LVSTIIQRKLRKIKEKDSDHGRHMKGFNR KVREPVIEPVVED ED V EEEEDD
Sbjct: 223 LVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDVEDSTDSSVGEEEEEDD 282
Query: 483 LIKEIVRTKYFEMPPLTVSEAVEQLELVAHDFYGFQNEETGEINIVYKRKEGGYGLIIPK 304
LIKEIVRTK FEMPPLTV+EAVEQLELV+HDFYGFQNEETGEINIVYKRKEGGYGLIIPK
Sbjct: 283 LIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEINIVYKRKEGGYGLIIPK 342
Query: 303 KDGKAEKVDPLPTEQLNEHSFAE 235
KDGKAEKV+PLPTEQLNEHSFAE
Sbjct: 343 KDGKAEKVEPLPTEQLNEHSFAE 365
>gi|18420800|ref|NP_568447.1| putative 30S ribosomal protein [Arabidopsis
thaliana]
Length = 308
Score = 497 bits (1277), Expect = 3e-138
Identities = 260/308 (84%), Positives = 273/308 (88%), Gaps = 8/308 (2%)
Frame = -1
Query: 1134 MTTLLGFSHTKLPHCNVSITSPTCPSSSTVVSMVG-RRSDSKTLRSGFLGRITHHDR--L 964
M TLLGFS TK HC V I++P C SSSTVVSMVG R+DSK LRS FLG+I + DR +
Sbjct: 1 MATLLGFSQTKFHHCGVWISTPPCSSSSTVVSMVGLNRTDSKKLRSDFLGQIGYEDRRQV 60
Query: 963 PSTGRRSSSTVKMSWDGSLASVKLIIQGKNLELSEAIKQHVEDKVGKAVQKHSHLVREVD 784
+ RSS VKMSWDG LASVKLIIQGKNLELSE IKQHVE+KVGK+VQKHSHLVREVD
Sbjct: 61 RHSYCRSSLAVKMSWDGPLASVKLIIQGKNLELSEPIKQHVEEKVGKSVQKHSHLVREVD 120
Query: 783 VRLSVRGGEFGKGPKIRRCEVTLFTKKHGVVRGEEDAETVYACIDLVSTIIQRKLRKIKE 604
VRLSVRGGEFGKGP+IRRCEVTLFTKKHGVVR EEDAETVYACIDLVSTIIQRKLRKIKE
Sbjct: 121 VRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKE 180
Query: 603 KDSDHGRHMKGFNRSKVREPVIEPVVEDPED-----VAGEEEEDDLIKEIVRTKYFEMPP 439
KDSDHGRHMKGFNR KVREPVIEPVVED ED V EEEEDDLIKEIVRTK FEMPP
Sbjct: 181 KDSDHGRHMKGFNRLKVREPVIEPVVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPP 240
Query: 438 LTVSEAVEQLELVAHDFYGFQNEETGEINIVYKRKEGGYGLIIPKKDGKAEKVDPLPTEQ 259
LTV+EAVEQLELV+HDFYGFQNEETGEINIVYKRKEGGYGLIIPKKDGKAEKV+PLPTEQ
Sbjct: 241 LTVAEAVEQLELVSHDFYGFQNEETGEINIVYKRKEGGYGLIIPKKDGKAEKVEPLPTEQ 300
Query: 258 LNEHSFAE 235
LNEHSFAE
Sbjct: 301 LNEHSFAE 308
>gi|297808465|ref|XP_002872116.1| hypothetical protein ARALYDRAFT_489312
[Arabidopsis lyrata subsp. lyrata]
Length = 308
Score = 496 bits (1275), Expect = 5e-138
Identities = 259/308 (84%), Positives = 273/308 (88%), Gaps = 8/308 (2%)
Frame = -1
Query: 1134 MTTLLGFSHTKLPHCNVSITSPTCPSSSTVVSMVG-RRSDSKTLRSGFLGRITHHDR--L 964
M TLLGFS TK HC VSI++P C SSSTVVSMVG R+DSK LRS FLG I + DR +
Sbjct: 1 MATLLGFSQTKFHHCGVSISTPPCSSSSTVVSMVGSSRTDSKKLRSDFLGHIGYDDRRQV 60
Query: 963 PSTGRRSSSTVKMSWDGSLASVKLIIQGKNLELSEAIKQHVEDKVGKAVQKHSHLVREVD 784
+ +SS VKMSWDG LASVKLIIQGKNLELSE IKQHVE+KVGK+VQKHSHLVREVD
Sbjct: 61 RPSCCKSSLAVKMSWDGPLASVKLIIQGKNLELSEPIKQHVEEKVGKSVQKHSHLVREVD 120
Query: 783 VRLSVRGGEFGKGPKIRRCEVTLFTKKHGVVRGEEDAETVYACIDLVSTIIQRKLRKIKE 604
VRLSVRGGEFGKGP+IRRCEVTLFTKKHGVVR EEDAETVYACIDLVSTIIQRKLRKIKE
Sbjct: 121 VRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKE 180
Query: 603 KDSDHGRHMKGFNRSKVREPVIEPVVEDPED-----VAGEEEEDDLIKEIVRTKYFEMPP 439
KDSDHGRHMKGFNR KVREPVIEPVVED ED + EEEEDDLIKEIVRTK FEMPP
Sbjct: 181 KDSDHGRHMKGFNRLKVREPVIEPVVEDVEDSTDSSLGEEEEEDDLIKEIVRTKTFEMPP 240
Query: 438 LTVSEAVEQLELVAHDFYGFQNEETGEINIVYKRKEGGYGLIIPKKDGKAEKVDPLPTEQ 259
LTV+EAVEQLELV+HDFYGFQNEETGEINIVYKRKEGGYGLIIPKKDGKAEKV+PLPTEQ
Sbjct: 241 LTVAEAVEQLELVSHDFYGFQNEETGEINIVYKRKEGGYGLIIPKKDGKAEKVEPLPTEQ 300
Query: 258 LNEHSFAE 235
LNEHSFAE
Sbjct: 301 LNEHSFAE 308
>gi|255566888|ref|XP_002524427.1| Plastid-specific 30S ribosomal protein 1,
chloroplast precursor, putative [Ricinus communis]
Length = 311
Score = 374 bits (960), Expect = 2e-101
Identities = 193/297 (64%), Positives = 236/297 (79%), Gaps = 8/297 (2%)
Frame = -1
Query: 1101 LPHCNVSITSPTCPSSSTVVSMVGRR----SDSKTLRSGFLG--RITHHDRLPSTGRRSS 940
LP ++S + T S S++ + ++ S S + ++ FL ++ + + R
Sbjct: 15 LPRVSLSPKAATSSSCSSICILGSKKLRLPSFSLSSKTSFLNPLKLGSNVKYFENKRGRR 74
Query: 939 STVKMSWDGSLASVKLIIQGKNLELSEAIKQHVEDKVGKAVQKHSHLVREVDVRLSVRGG 760
S V+MSW+G L+SVKLI QGKNLEL++ +K+HVEDKVGKAVQKHSHLVREVDVRLSVRGG
Sbjct: 75 SAVRMSWEGPLSSVKLITQGKNLELTDTVKKHVEDKVGKAVQKHSHLVREVDVRLSVRGG 134
Query: 759 EFGKGPKIRRCEVTLFTKKHGVVRGEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRH 580
EFGKGPKIRRCEVTLFTKKHGV+R EEDAET+YA IDLVS+IIQRKLRKIKEK SDHGRH
Sbjct: 135 EFGKGPKIRRCEVTLFTKKHGVIRAEEDAETIYASIDLVSSIIQRKLRKIKEKVSDHGRH 194
Query: 579 MKGFNRSKVREPVIEPVVEDPEDVAG--EEEEDDLIKEIVRTKYFEMPPLTVSEAVEQLE 406
MKGFNR KVREPV EPV +D ++V G +E++D I E+VRTKYF+MPPLTVSEA+EQL+
Sbjct: 195 MKGFNRLKVREPVAEPVKDDTDEVDGVLGDEDEDYIDEVVRTKYFDMPPLTVSEAIEQLK 254
Query: 405 LVAHDFYGFQNEETGEINIVYKRKEGGYGLIIPKKDGKAEKVDPLPTEQLNEHSFAE 235
V HDFYGF+NEETGEINI+YKRK GGYG+IIPK++GKAEK++P+ E E S AE
Sbjct: 255 NVDHDFYGFRNEETGEINIIYKRKAGGYGIIIPKENGKAEKLEPVVIEPAREPSIAE 311
>gi|118488335|gb|ABK95986.1| unknown [Populus trichocarpa]
Length = 306
Score = 370 bits (948), Expect = 4e-100
Identities = 191/308 (62%), Positives = 239/308 (77%), Gaps = 10/308 (3%)
Frame = -1
Query: 1134 MTTLLGFSHTKLPH--CNVSITSPTCPSSSTVVSMVGRRSDSKTLRSGFLGR------IT 979
M +L+G H + ++ T+PT +S+ V+ + L+S FLG+ I
Sbjct: 1 MASLVGTLHAGFNNRIAPLTSTTPTPSLASSFVNSTKTQVPKVFLKSRFLGKNVNFVEIR 60
Query: 978 HHDRLPSTGRRSSSTVKMSWDGSLASVKLIIQGKNLELSEAIKQHVEDKVGKAVQKHSHL 799
++P + S+++MSWDG L+SVKLIIQGK+LELS+ +K+HVEDKVGKAVQK SHL
Sbjct: 61 RKTKIPLS--HGGSSIRMSWDGPLSSVKLIIQGKHLELSDTVKKHVEDKVGKAVQKSSHL 118
Query: 798 VREVDVRLSVRGGEFGKGPKIRRCEVTLFTKKHGVVRGEEDAETVYACIDLVSTIIQRKL 619
VR VDVRLSVRGGE GKGP+IRRCEVTLFTK+HGVVR EEDAET++A IDLVS+IIQRKL
Sbjct: 119 VRGVDVRLSVRGGELGKGPRIRRCEVTLFTKRHGVVRAEEDAETIHASIDLVSSIIQRKL 178
Query: 618 RKIKEKDSDHGRHMKGFNRSKVREPVIEPVVEDPEDVAGEEEEDDLIKEIVRTKYFEMPP 439
RKIK+K+SDHGRHMKGFNR KVREP+ + VVED D ++E++D I+E+VRTKYF+MPP
Sbjct: 179 RKIKDKESDHGRHMKGFNRLKVREPMHQVVVEDDADEVSQQEDEDYIEEVVRTKYFDMPP 238
Query: 438 LTVSEAVEQLELVAHDFYGFQNEETGEINIVYKRKEGGYGLIIPKKDGKAEKVDPLPTEQ 259
LTVSEA+EQLE V HDFYGF++EETGEINI+YKRK GGYGLIIPK +G+AE+++PL E
Sbjct: 239 LTVSEAIEQLEHVHHDFYGFRDEETGEINIIYKRKAGGYGLIIPKGNGEAERLEPLVVEP 298
Query: 258 LNEHSFAE 235
E S AE
Sbjct: 299 AREPSLAE 306
>gi|224118512|ref|XP_002317839.1| predicted protein [Populus trichocarpa]
Length = 306
Score = 369 bits (945), Expect = 8e-100
Identities = 192/291 (65%), Positives = 225/291 (77%), Gaps = 5/291 (1%)
Frame = -1
Query: 1098 PHCNVSITSPTCPSSSTVVSMVGRRSDSKTLRSGFLGRITHHDRLPSTGR----RSSSTV 931
P ++S T P +S+ V + +L+S FLG+ L T R +V
Sbjct: 16 PFVSLSPTPPKTSLASSSVISTKTQIPKSSLKSSFLGKNMSFIELGRTARTPLTHGGCSV 75
Query: 930 KMSWDGSLASVKLIIQGKNLELSEAIKQHVEDKVGKAVQKHSHLVREVDVRLSVRGGEFG 751
KMSWDG L SVKLIIQGKNLEL++ +K+HVEDKVGKAVQKHSHLVREVDVRLSVRGGE G
Sbjct: 76 KMSWDGPLHSVKLIIQGKNLELTDTVKRHVEDKVGKAVQKHSHLVREVDVRLSVRGGELG 135
Query: 750 KGPKIRRCEVTLFTKKHGVVRGEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKG 571
KGP+IRRCEVTLFT +HGVVR EEDAET+YA IDLVS+IIQRKLRKIKEK+SDHGRHMKG
Sbjct: 136 KGPRIRRCEVTLFTNRHGVVRAEEDAETIYASIDLVSSIIQRKLRKIKEKESDHGRHMKG 195
Query: 570 FNRSKVREPVIEPVVEDPEDVAGEEEEDDLIKEIVRTKYFEMPPLTVSEAVEQLELVAHD 391
FNR KVREPV + VVE D ++E +D I+E+VRTK+F+MPPLTVSEA+EQLE V HD
Sbjct: 196 FNRLKVREPVPQ-VVEGDADEVSQQEVEDSIEEVVRTKFFDMPPLTVSEAIEQLENVDHD 254
Query: 390 FYGFQNEETGEINIVYKRKEGGYGLIIPKKDGKAEKVDPLPTEQLNEHSFA 238
FYGF+NEETGEINIVYKRK GGYGLIIPK + +AE+++PL E E S A
Sbjct: 255 FYGFRNEETGEINIVYKRKAGGYGLIIPKGNDEAERLEPLVVEPARESSLA 305
>gi|224134949|ref|XP_002321945.1| predicted protein [Populus trichocarpa]
Length = 231
Score = 357 bits (916), Expect = 2e-096
Identities = 174/231 (75%), Positives = 204/231 (88%)
Frame = -1
Query: 927 MSWDGSLASVKLIIQGKNLELSEAIKQHVEDKVGKAVQKHSHLVREVDVRLSVRGGEFGK 748
MSWDG L+SVKLIIQGK+LELS+ +K+HVEDKVGKAVQK SHLVR VDVRLSVRGGE GK
Sbjct: 1 MSWDGPLSSVKLIIQGKHLELSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVRGGELGK 60
Query: 747 GPKIRRCEVTLFTKKHGVVRGEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGF 568
GP+IRRCEVTLFTK+HGVVR EEDAET++A IDLVS+IIQRKLRKIK+K+SDHGRHMKGF
Sbjct: 61 GPRIRRCEVTLFTKRHGVVRAEEDAETIHASIDLVSSIIQRKLRKIKDKESDHGRHMKGF 120
Query: 567 NRSKVREPVIEPVVEDPEDVAGEEEEDDLIKEIVRTKYFEMPPLTVSEAVEQLELVAHDF 388
NR KVREP+ + VVED D ++E++D I+E+VRTKYF+MPPLTVSEA+EQLE V HDF
Sbjct: 121 NRLKVREPMHQVVVEDDADEVSQQEDEDYIEEVVRTKYFDMPPLTVSEAIEQLEHVHHDF 180
Query: 387 YGFQNEETGEINIVYKRKEGGYGLIIPKKDGKAEKVDPLPTEQLNEHSFAE 235
YGF++EETGEINI+YKRK GGYGLIIPK +G+AE+++PL E E S AE
Sbjct: 181 YGFRDEETGEINIIYKRKAGGYGLIIPKGNGEAERLEPLVVEPAREPSLAE 231
>gi|225455215|ref|XP_002271324.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 298
Score = 356 bits (912), Expect = 6e-096
Identities = 187/280 (66%), Positives = 222/280 (79%), Gaps = 5/280 (1%)
Frame = -1
Query: 1074 SPTCPSSSTVVSMVGRRSDSKTLRSGFLGRITHHDRLPSTGRRSSS-TVKMSWDGSLASV 898
SP+ SSS + S RS S S I +L +T R++ V+MSWDG L+SV
Sbjct: 22 SPSPYSSSFLASSKSLRSLSNLSSSSGGSSIL---KLNATTRQTKPLAVRMSWDGPLSSV 78
Query: 897 KLIIQGKNLELSEAIKQHVEDKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPKIRRCEVT 718
KLI+QGKNLEL++ ++ HVE+KVGKAVQKHSHLVREVDVRLS+RGGE GKGPKIRRCEVT
Sbjct: 79 KLILQGKNLELTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSIRGGELGKGPKIRRCEVT 138
Query: 717 LFTKKHGVVRGEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRSKVREPVI 538
LFTKKHGVVR EE AET+Y ID+VS+IIQRKLRKIKEKDSDHGRHMKGFNR KVR+P
Sbjct: 139 LFTKKHGVVRAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVRDPE- 197
Query: 537 EPVVEDPEDVAGEEEEDDLIKEIVRTKYFEMPPLTVSEAVEQLELVAHDFYGFQNEETGE 358
P+VE+ DV ++E+ DLI EIVRTKYF+MPPLTV EAVEQLE V HDF+GF+NEETGE
Sbjct: 198 TPLVEEEADVVPQKEDGDLINEIVRTKYFDMPPLTVPEAVEQLENVDHDFFGFRNEETGE 257
Query: 357 INIVYKRKEGGYGLIIPKKDGKAEKVDPLPTEQLNEHSFA 238
INI+YKRK GGYGLIIPK++GK E+++P+ + E S A
Sbjct: 258 INILYKRKAGGYGLIIPKENGKTEELEPVVVKSDREPSLA 297
>gi|302143982|emb|CBI23087.3| unnamed protein product [Vitis vinifera]
Length = 230
Score = 351 bits (898), Expect = 2e-094
Identities = 172/230 (74%), Positives = 200/230 (86%), Gaps = 1/230 (0%)
Frame = -1
Query: 927 MSWDGSLASVKLIIQGKNLELSEAIKQHVEDKVGKAVQKHSHLVREVDVRLSVRGGEFGK 748
MSWDG L+SVKLI+QGKNLEL++ ++ HVE+KVGKAVQKHSHLVREVDVRLS+RGGE GK
Sbjct: 1 MSWDGPLSSVKLILQGKNLELTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSIRGGELGK 60
Query: 747 GPKIRRCEVTLFTKKHGVVRGEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGF 568
GPKIRRCEVTLFTKKHGVVR EE AET+Y ID+VS+IIQRKLRKIKEKDSDHGRHMKGF
Sbjct: 61 GPKIRRCEVTLFTKKHGVVRAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGF 120
Query: 567 NRSKVREPVIEPVVEDPEDVAGEEEEDDLIKEIVRTKYFEMPPLTVSEAVEQLELVAHDF 388
NR KVR+P P+VE+ DV ++E+ DLI EIVRTKYF+MPPLTV EAVEQLE V HDF
Sbjct: 121 NRLKVRDPE-TPLVEEEADVVPQKEDGDLINEIVRTKYFDMPPLTVPEAVEQLENVDHDF 179
Query: 387 YGFQNEETGEINIVYKRKEGGYGLIIPKKDGKAEKVDPLPTEQLNEHSFA 238
+GF+NEETGEINI+YKRK GGYGLIIPK++GK E+++P+ + E S A
Sbjct: 180 FGFRNEETGEINILYKRKAGGYGLIIPKENGKTEELEPVVVKSDREPSLA 229
>gi|51457950|gb|AAU03364.1| chloroplast-specific ribosomal protein [Solanum
lycopersicum]
Length = 311
Score = 347 bits (888), Expect = 3e-093
Identities = 182/287 (63%), Positives = 222/287 (77%), Gaps = 10/287 (3%)
Frame = -1
Query: 1074 SPTCP-SSSTVVSMVGRRSDSKTLRSGFLGRITHHDRLPSTGRRSSS-TVKMSWDGSLAS 901
S +CP ++S +S+ ++S+ L S F + +P R + S V+MSWDG L+S
Sbjct: 28 SSSCPATASPALSLTLSSTNSRFLNSAFK---MNEINVPVRNRVTKSFGVRMSWDGPLSS 84
Query: 900 VKLIIQGKNLELSEAIKQHVEDKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPKIRRCEV 721
VKLI+QGKNLEL+ A+K +VE+K+GKAVQKHSHL REVDVRLSVRGGE GKGPKIRRCEV
Sbjct: 85 VKLILQGKNLELTPAVKDYVEEKLGKAVQKHSHLAREVDVRLSVRGGELGKGPKIRRCEV 144
Query: 720 TLFTKKHGVVRGEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRSKVREPV 541
TLFTKKHGV+R EED E++Y ID+VS+IIQRKLRKIKEKDSD GRHMKGF+R KVR+P
Sbjct: 145 TLFTKKHGVIRAEEDGESIYGSIDMVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVRDPE 204
Query: 540 IEPVVEDPEDVAGEEEEDD-----LIKEIVRTKYFEMPPLTVSEAVEQLELVAHDFYGFQ 376
V ED E ++ EEE +D + E+VR K F+MPPL+V+EA+EQLE V HDFYGF+
Sbjct: 205 ALLVQEDLETLSQEEEVEDDKSDGFVTEVVRKKSFDMPPLSVNEAIEQLENVDHDFYGFR 264
Query: 375 NEETGEINIVYKRKEGGYGLIIPKKDGKAEKVDPLPTEQLNEHSFAE 235
NEETGEINIVY+RKEGGYGLIIPK+DGK EK++PL E E S AE
Sbjct: 265 NEETGEINIVYRRKEGGYGLIIPKEDGKTEKLEPLEVEPEKEPSIAE 311
>gi|258611172|gb|ACV83721.1| chloroplast ribosomal protein [Solanum tuberosum]
Length = 280
Score = 346 bits (885), Expect = 8e-093
Identities = 180/278 (64%), Positives = 217/278 (78%), Gaps = 11/278 (3%)
Frame = -1
Query: 1068 TCP-SSSTVVSMVGRRSDSKTLRSGFLGRITHHDRLPSTGR-RSSSTVKMSWDGSLASVK 895
+CP ++S S+ S+S L S F + +P R + S V+MSWDG L+SVK
Sbjct: 2 SCPTTASPAFSLTLSSSNSGFLNSAFK---KNEINVPVRNRVKXSFGVRMSWDGPLSSVK 58
Query: 894 LIIQGKNLELSEAIKQHVEDKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPKIRRCEVTL 715
LI+QGKNLEL+ A+K +VE+K+GKAVQKHSHL REVDVRLSVRGGE GKGPKIRRCEVTL
Sbjct: 59 LILQGKNLELTPAVKDYVEEKLGKAVQKHSHLAREVDVRLSVRGGELGKGPKIRRCEVTL 118
Query: 714 FTKKHGVVRGEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRSKVREPVIE 535
FTKKHGV+R EEDAE++Y ID+VS+IIQRKLRKIKEKDSDHGRHMKGF+R KVR+P +
Sbjct: 119 FTKKHGVIRAEEDAESIYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVRDPEVL 178
Query: 534 PVVEDPEDVAGEEEEDD------LIKEIVRTKYFEMPPLTVSEAVEQLELVAHDFYGFQN 373
V ED E + EEE +D + E+VR K F+MPPL+V+EA+EQLE V HDFYGF+N
Sbjct: 179 LVQEDLETLPQEEEVEDDDKSDGFVTEVVRKKSFDMPPLSVNEAIEQLENVDHDFYGFRN 238
Query: 372 EETGEINIVYKRKEGGYGLIIPKKDGKAEKVDPLPTEQ 259
EETGEINIVY+RKEGGYGLIIPK+DGK EK++PL Q
Sbjct: 239 EETGEINIVYRRKEGGYGLIIPKEDGKTEKLEPLEVNQ 276
>gi|134034|sp|P19954.2|RR30_SPIOL RecName: Full=30S ribosomal protein 1,
chloroplastic; AltName: Full=CS-S5; Short=CS5; AltName:
Full=Plastid-specific 30S ribosomal protein 1; Short=PSRP-1; AltName:
Full=Ribosomal protein 1; AltName: Full=S22; Flags: Precursor
Length = 302
Score = 336 bits (861), Expect = 5e-090
Identities = 169/248 (68%), Positives = 203/248 (81%), Gaps = 12/248 (4%)
Frame = -1
Query: 951 RRSSSTVKMSWDGSLASVKLIIQGKNLELSEAIKQHVEDKVGKAVQKHSHLVREVDVRLS 772
R + V MSWDG L+SVKLI+QG+NLE+S+ ++ HVEDKVGK+V KHSHLVREVDVRLS
Sbjct: 58 RNKPNVVCMSWDGPLSSVKLILQGRNLEVSDNVRSHVEDKVGKSVAKHSHLVREVDVRLS 117
Query: 771 VRGGEFGKGPKIRRCEVTLFTKKHGVVRGEEDAETVYACIDLVSTIIQRKLRKIKEKDSD 592
RGG+ KGPK+RRCEVTLFTK+HGV+R EEDAE++Y+ IDLVS+IIQRKLRKIK+K SD
Sbjct: 118 ARGGDLSKGPKLRRCEVTLFTKRHGVIRAEEDAESLYSSIDLVSSIIQRKLRKIKDKVSD 177
Query: 591 HGRHMKGFNRSKVREP---------VIEPVVEDPEDVAGEEEEDDLIKEIVRTKYFEMPP 439
HGRHMKGFNRSKVR+P V+E V P V+ E+DD I+E+VRTKYF+MPP
Sbjct: 178 HGRHMKGFNRSKVRDPEPVRITREEVLEEVESAPAPVS--VEDDDFIEEVVRTKYFDMPP 235
Query: 438 LTVSEAVEQLELVAHDFYGFQNEETGEINIVYKRKEGGYGLIIPKKDGKAEKVDPLPTEQ 259
LT++EAVEQLE V HDFY F+NEETG+INI+YKRKEGGYGLIIP KDGK EK++ LP +
Sbjct: 236 LTITEAVEQLENVDHDFYAFRNEETGDINILYKRKEGGYGLIIP-KDGKTEKLESLPVQT 294
Query: 258 LNEHSFAE 235
+ SFAE
Sbjct: 295 DKQPSFAE 302
>gi|170131|gb|AAA34039.1| ribosomal protein 30S subunit [Spinacia oleracea]
Length = 302
Score = 336 bits (861), Expect = 5e-090
Identities = 169/248 (68%), Positives = 203/248 (81%), Gaps = 12/248 (4%)
Frame = -1
Query: 951 RRSSSTVKMSWDGSLASVKLIIQGKNLELSEAIKQHVEDKVGKAVQKHSHLVREVDVRLS 772
R + V MSWDG L+SVKLI+QG+NLE+S+ ++ HVEDKVGK+V KHSHLVREVDVRLS
Sbjct: 58 RNKPNVVCMSWDGPLSSVKLILQGRNLEVSDNVRSHVEDKVGKSVAKHSHLVREVDVRLS 117
Query: 771 VRGGEFGKGPKIRRCEVTLFTKKHGVVRGEEDAETVYACIDLVSTIIQRKLRKIKEKDSD 592
RGG+ KGPK+RRCEVTLFTK+HGV+R EEDAE++Y+ IDLVS+IIQRKLRKIK+K SD
Sbjct: 118 ARGGDLSKGPKLRRCEVTLFTKRHGVIRAEEDAESLYSSIDLVSSIIQRKLRKIKDKVSD 177
Query: 591 HGRHMKGFNRSKVREP---------VIEPVVEDPEDVAGEEEEDDLIKEIVRTKYFEMPP 439
HGRHMKGFNRSKVR+P V+E V P V+ E+DD I+E+VRTKYF+MPP
Sbjct: 178 HGRHMKGFNRSKVRDPEPVRITREEVLEEVESAPAPVS--VEDDDFIEEVVRTKYFDMPP 235
Query: 438 LTVSEAVEQLELVAHDFYGFQNEETGEINIVYKRKEGGYGLIIPKKDGKAEKVDPLPTEQ 259
LT++EAVEQLE V HDFY F+NEETG+INI+YKRKEGGYGLIIP KDGK EK++ LP +
Sbjct: 236 LTITEAVEQLENVDHDFYAFRNEETGDINILYKRKEGGYGLIIP-KDGKTEKLESLPVQT 294
Query: 258 LNEHSFAE 235
+ SFAE
Sbjct: 295 DKQPSFAE 302
>gi|242037341|ref|XP_002466065.1| hypothetical protein SORBIDRAFT_01g000590
[Sorghum bicolor]
Length = 310
Score = 279 bits (713), Expect = 7e-073
Identities = 147/292 (50%), Positives = 202/292 (69%), Gaps = 20/292 (6%)
Frame = -1
Query: 1098 PHCNVSITSPTCPSSSTVVSMVGRRSDSKTLRSGFLGR-------ITHHDRLPSTGRRSS 940
P + +I P+ P S S+ LRSGFLGR + D RR S
Sbjct: 7 PSPSAAIARPSHPRSCAAASV--------ALRSGFLGRGLAAVVPVAVDDPRCRLRRRVS 58
Query: 939 STVKMSWDGSLASVKLIIQGKNLELSEAIKQHVEDKVGKAVQKHSHLVREVDVRLSVRGG 760
+V+M+WDG L+SV+LI+QG+N++LS+ +K+H+EDKVG+AV KH HLVREVDVRLS RGG
Sbjct: 59 FSVRMAWDGPLSSVRLIMQGRNVKLSDKLKEHIEDKVGRAVSKHCHLVREVDVRLSARGG 118
Query: 759 EFGKGPKIRRCEVTLFTKKHGVVRGEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRH 580
E G+GPK RCE+TLF+K+HGV+R EEDAE+ YA IDL + II+RKLRKIKEK+++ R
Sbjct: 119 ELGRGPKTSRCEITLFSKRHGVLRAEEDAESTYASIDLAAAIIKRKLRKIKEKETEVRRD 178
Query: 579 MKGFNRSKVRE--PVIEPVVEDPEDVA---GEEEEDDLIKEIVRTKYFEMPPLTVSEAVE 415
G E P+++ + + +++A G E+E ++ ++VRTK FEMPPLTV EA+E
Sbjct: 179 GDGGAGGAWEEELPLLDDDLVEADELAAAVGAEDEQTVVAKVVRTKVFEMPPLTVEEALE 238
Query: 414 QLELVAHDFYGFQNEETGEINIVYKRKEGGYGLIIPKKDGKAEKVDPLPTEQ 259
QL+ V H+FY F++E TG++NI+Y+RKEGGYGLIIPK+DG + D + Q
Sbjct: 239 QLDNVGHNFYCFRDEATGQVNILYRRKEGGYGLIIPKEDGNFDNKDTVGVAQ 290
>gi|226528966|ref|NP_001151285.1| plastid-specific 30S ribosomal protein 1 [Zea
mays]
Length = 309
Score = 278 bits (711), Expect = 1e-072
Identities = 143/254 (56%), Positives = 187/254 (73%), Gaps = 9/254 (3%)
Frame = -1
Query: 1005 RSGFLGRITHHDRLP-----STGRRSSSTVKMSWDGSLASVKLIIQGKNLELSEAIKQHV 841
RSGFLGR+ +P + RR S +V+M+WDG L+SV+LI+Q +N +LSE +K+H+
Sbjct: 33 RSGFLGRVV-LAAVPVAVDATRRRRVSVSVRMAWDGPLSSVRLIMQSRNAKLSEKLKEHI 91
Query: 840 EDKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPKIRRCEVTLFTKKHGVVRGEEDAETVY 661
EDKVG+AV KH HLVREVDVRLS RGGE G+GPK RCE+TLFTK+HGV+R EEDAE+ Y
Sbjct: 92 EDKVGRAVSKHCHLVREVDVRLSARGGELGRGPKTSRCEITLFTKRHGVLRAEEDAESTY 151
Query: 660 ACIDLVSTIIQRKLRKIKEKDSD--HGRHMKGFNRSKVREPVIEPV-VEDPEDVAGEEEE 490
A IDL + I++RKLRKIKEK+++ G G ++ P +D E G E+E
Sbjct: 152 ASIDLAAAIVKRKLRKIKEKETEVRRGGDADGVWDEIPPADLLPPAEADDLEAAVGAEDE 211
Query: 489 DDLIKEIVRTKYFEMPPLTVSEAVEQLELVAHDFYGFQNEETGEINIVYKRKEGGYGLII 310
+ ++ ++VRTK FEMPPLTV EA+EQLE V HDFY F++E TG++NI+Y+RKEGGYGLII
Sbjct: 212 ETVLAKVVRTKVFEMPPLTVEEALEQLENVDHDFYCFRDEATGQVNILYRRKEGGYGLII 271
Query: 309 PKKDGKAEKVDPLP 268
PK DGK + V +P
Sbjct: 272 PKNDGKVDTVGVVP 285
>gi|168011837|ref|XP_001758609.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 221
Score = 252 bits (642), Expect = 1e-064
Identities = 128/210 (60%), Positives = 163/210 (77%), Gaps = 2/210 (0%)
Frame = -1
Query: 927 MSWDGSLASVKLIIQGKNLELSEAIKQHVEDKVGKAVQKHSHLVREVDVRLSVRGGEFGK 748
M+W G+LA V+L+IQGK+LEL++AIKQ+VE+KVG AV S LV+EVDVR+SVRGGE G+
Sbjct: 1 MAWGGALAGVRLVIQGKHLELTDAIKQYVEEKVGNAVHNQSALVKEVDVRMSVRGGETGR 60
Query: 747 GPKIRRCEVTLFTKKHGVVRGEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGF 568
G K++RCEVTLFTKKHGVVR EE+AE++YA ID VS +I RKLRKIKEKD HGR K
Sbjct: 61 GGKLQRCEVTLFTKKHGVVRAEEEAESMYASIDRVSDVISRKLRKIKEKDGGHGRPTKSR 120
Query: 567 NRSKVREPVIEPVVEDPEDVAGEEEEDDLIKEIVRTKYFEMPPLTVSEAVEQLELVAHDF 388
+ ++ E + + VV D + + G + DDL EIVRTKYFEM P+ EA+EQL V HDF
Sbjct: 121 HSPRIGEVLSDEVV-DLDPILG-RKPDDLPDEIVRTKYFEMRPMKPLEALEQLVNVGHDF 178
Query: 387 YGFQNEETGEINIVYKRKEGGYGLIIPKKD 298
Y F+N E+GEINI+YKR GGYG+I+P+ +
Sbjct: 179 YAFRNVESGEINILYKRTHGGYGIIVPRNE 208
>gi|118489730|gb|ABK96666.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 268
Score = 251 bits (639), Expect = 3e-064
Identities = 134/230 (58%), Positives = 170/230 (73%), Gaps = 11/230 (4%)
Frame = -1
Query: 1134 MTTLLGFSHTKLPH--CNVSITSPTCPSSSTVVSMVGRRSDSKTLRSGFLGR------IT 979
M +L+G H + ++ T+PT +S+ V+ + L+S FLG+ I
Sbjct: 1 MASLVGTLHASFNNRIAPLTSTTPTPSLASSFVNSTKTQVPKVFLKSRFLGKNVNFAEIR 60
Query: 978 HHDRLPSTGRRSSSTVKMSWDGSLASVKLIIQGKNLELSEAIKQHVEDKVGKAVQKHSHL 799
++P + S+++MSWDG L+SVKLIIQGK+LELS+ +K+HVEDKVGKAVQK SHL
Sbjct: 61 RKTKIPLS--HGGSSIRMSWDGPLSSVKLIIQGKHLELSDTVKKHVEDKVGKAVQKSSHL 118
Query: 798 VREVDVRLSVRGGEFGKGPKIRRCEVTLFTKKHGVVRGEEDAETVYACIDLVSTIIQRKL 619
VR VDVRLSVRGGE GKGP+IRRCEVTLFTK+HGVVR EEDAET+YA IDL S+IIQRKL
Sbjct: 119 VRGVDVRLSVRGGELGKGPRIRRCEVTLFTKRHGVVRAEEDAETIYASIDLASSIIQRKL 178
Query: 618 RKIKEKDSDHGRHMKGFNRSKVREPVIEPVVEDPEDVAGEEEEDDLIKEI 469
RKIK+K+SDHGRHMKGFNR KVREP + VVED D ++E++D I+E+
Sbjct: 179 RKIKDKESDHGRHMKGFNRLKVREP-MHQVVEDDADEVSQQEDEDYIEEV 227
>gi|227070|prf||1613445A ribosomal protein CS-S5
Length = 321
Score = 217 bits (552), Expect = 3e-054
Identities = 107/148 (72%), Positives = 127/148 (85%), Gaps = 2/148 (1%)
Frame = -1
Query: 951 RRSSSTVKMSWDGSLASVKLIIQGKNLELSEAIKQHVEDKVGKAVQKHSHLVREVDVRLS 772
R + V MSWDG L+SVKLI+QG+NLE+S+ ++ HVEDKVGK+V KHSHLVREVDVRLS
Sbjct: 58 RNKPNVVCMSWDGPLSSVKLILQGRNLEVSDNVRSHVEDKVGKSVAKHSHLVREVDVRLS 117
Query: 771 VRGGEFGKGPKIRRCEVTLFTKKHGVVRGEEDAETVYACIDLVSTIIQRKLRKIKEKDSD 592
RGG+ KGPK+RRCEVTLFTK+HGV+R EEDAE++Y+ IDLVS+IIQRKLRKIK+K SD
Sbjct: 118 SRGGDLSKGPKLRRCEVTLFTKRHGVIRAEEDAESLYSSIDLVSSIIQRKLRKIKDKVSD 177
Query: 591 HGRHMKGFNRSKVREPVIEPVVEDPEDV 508
HGRHMKGFNRSKVR+P EPV E+V
Sbjct: 178 HGRHMKGFNRSKVRDP--EPVRITREEV 203
>gi|148907338|gb|ABR16805.1| unknown [Picea sitchensis]
Length = 321
Score = 188 bits (476), Expect = 2e-045
Identities = 96/163 (58%), Positives = 127/163 (77%), Gaps = 3/163 (1%)
Frame = -1
Query: 921 WDGSLASVKLIIQGKNLELSEAIKQHVEDKVGKAVQKHSHLVREVDVRLSVRGGEFGKGP 742
W G L+SV+LIIQGKN +L++A+K ++E+KVG AVQKH++LVREVDVRLS+RGGE GKGP
Sbjct: 81 WSGPLSSVRLIIQGKNFQLTDAVKAYIEEKVGIAVQKHANLVREVDVRLSIRGGEVGKGP 140
Query: 741 KIRRCEVTLFTKKHGVVRGEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNR 562
KIRRCEVTLFTKKHGVVR EE+AET+YA ID+VS II+RKLRKIKEKD HGR K +
Sbjct: 141 KIRRCEVTLFTKKHGVVRAEEEAETIYASIDIVSDIIRRKLRKIKEKDGGHGRPSKMRKQ 200
Query: 561 SKVREPVIEPVVEDPEDVAGEEEEDDLIKEIVRTKYFEMPPLT 433
K+ E ++ VV D ++ +E +D + ++ +Y ++ L+
Sbjct: 201 PKLGE-LLSTVVMDVKETRDKELDD--LADVEEMRYEKIDDLS 240
>gi|115456699|ref|NP_001051950.1| Os03g0856500 [Oryza sativa Japonica Group]
Length = 309
Score = 187 bits (474), Expect = 3e-045
Identities = 98/157 (62%), Positives = 126/157 (80%), Gaps = 7/157 (4%)
Frame = -1
Query: 1023 SDSKTLRSGFLGR---ITHHDR--LPSTGRRSSS-TVKMSWDGSLASVKLIIQGKNLELS 862
S S LRSGFLGR H + L + RRSS+ +V+MSWDG L+SV+LI+QG+N++L+
Sbjct: 34 SVSVPLRSGFLGRALPAAAHPQPLLAAESRRSSAVSVRMSWDGPLSSVRLIMQGRNVKLN 93
Query: 861 EAIKQHVEDKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPKIRRCEVTLFTKKHGVVRGE 682
E +K+H+E+K G+AV KHS LV+EVDVRLS RGGE +GPKI RCE+TLFTK+HGV+R E
Sbjct: 94 EKVKEHIEEKAGRAVAKHSQLVKEVDVRLSARGGELSRGPKICRCEITLFTKRHGVIRAE 153
Query: 681 EDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKG 571
EDAE+ YA IDL S+II+RKLRKIKEK++D RH+KG
Sbjct: 154 EDAESTYASIDLASSIIKRKLRKIKEKETD-VRHLKG 189
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,844,195,214,508
Number of Sequences: 15229318
Number of Extensions: 2844195214508
Number of Successful Extensions: 670869000
Number of sequences better than 0.0: 0
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