BLASTX 7.6.2
Query= UN23536 /QuerySize=1119
(1118 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297810421|ref|XP_002873094.1| predicted protein [Arabidopsis ... 124 3e-026
gi|297831128|ref|XP_002883446.1| predicted protein [Arabidopsis ... 123 7e-026
gi|297851804|ref|XP_002893783.1| predicted protein [Arabidopsis ... 116 7e-024
gi|297806309|ref|XP_002871038.1| predicted protein [Arabidopsis ... 112 2e-022
gi|15242768|ref|NP_195968.1| RNA-binding (RRM/RBD/RNP motifs) fa... 105 2e-020
gi|297788547|ref|XP_002862358.1| predicted protein [Arabidopsis ... 84 5e-014
gi|297798354|ref|XP_002867061.1| hypothetical protein ARALYDRAFT... 84 5e-014
gi|297819148|ref|XP_002877457.1| predicted protein [Arabidopsis ... 83 8e-014
gi|297806867|ref|XP_002871317.1| predicted protein [Arabidopsis ... 80 4e-013
gi|297810419|ref|XP_002873093.1| predicted protein [Arabidopsis ... 80 4e-013
gi|145334285|ref|NP_001078524.1| RNA-binding (RRM/RBD/RNP motifs... 77 4e-012
gi|7378635|emb|CAB83311.1| putative protein [Arabidopsis thaliana] 69 1e-009
gi|297818940|ref|XP_002877353.1| predicted protein [Arabidopsis ... 62 2e-007
gi|297828670|ref|XP_002882217.1| predicted protein [Arabidopsis ... 60 6e-007
gi|15233825|ref|NP_194173.1| RNA recognition motif-containing pr... 59 2e-006
gi|242080817|ref|XP_002445177.1| hypothetical protein SORBIDRAFT... 58 3e-006
gi|212724137|ref|NP_001132813.1| hypothetical protein LOC1001943... 57 6e-006
gi|223943677|gb|ACN25922.1| unknown [Zea mays] 57 6e-006
>gi|297810421|ref|XP_002873094.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 262
Score = 124 bits (310), Expect = 3e-026
Identities = 81/200 (40%), Positives = 109/200 (54%), Gaps = 3/200 (1%)
Frame = +1
Query: 91 ESEAAGEEIVENNRCK-PHTVISVEGYDTSLPEDDIKSELINHFKSCGEVFNVILREDPD 267
E +G + E+N C T ISVEGYDT L + +K L HF SCGE+ N+ + D +
Sbjct: 13 ELNDSGSDSGESNCCSCTSTTISVEGYDTWLRKYPLKLVLEKHFASCGEITNIYVPTDFE 72
Query: 268 SPNLDRRALVILLGEGAEEKALQLNGTDIGGWKALVKVEPEEEEDEETQRYKSFLIDELT 447
L A + + GEGAEEKALQL+GTD+GGW A+VK P ++ + Y
Sbjct: 73 RGILKSVAFMRIEGEGAEEKALQLSGTDVGGWTAIVKPAPSQKVFMDDPWYAGPRCAAAP 132
Query: 448 NDRRFWYGVTVRGYNTSLPADEVKTCLKHHFSSCGDITHVFVSTLEKITNIYFHQEEGEA 627
D + + + V GY+TSLP +++ L HFSSCG I V V + IY E
Sbjct: 133 ADTK-THMIRVTGYDTSLPKIDMQIALYKHFSSCGSIWKVIVLS-SGAAFIYLEGERCVD 190
Query: 628 KALDLSGSEVGGFKIDVERV 687
KAL+LSG +GG + VE V
Sbjct: 191 KALELSGRNMGGSTLVVEPV 210
>gi|297831128|ref|XP_002883446.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 319
Score = 123 bits (307), Expect = 7e-026
Identities = 82/213 (38%), Positives = 111/213 (52%), Gaps = 6/213 (2%)
Frame = +1
Query: 145 TVISVEGYDTSLPEDDIKSELINHFKSCGEVFNVILREDPDSPNLDRRALVILLGEGAEE 324
T +SVEGYDT L + +K L HF SCGE+ N+ + D + L A + + GEGAEE
Sbjct: 45 TTVSVEGYDTWLRKYPLKLVLEKHFASCGEITNIYVPTDFERGILKSVAFMRIEGEGAEE 104
Query: 325 KALQLNGTDIGGWKALVKVEPEEEEDEETQRYKSFLIDELTNDRRFWYGVTVRGYNTSLP 504
KALQL+GTDIGGW A+VK P ++ + RY D + + + + GY+TSLP
Sbjct: 105 KALQLSGTDIGGWTAIVKPAPWQKVFMDDPRYAGPRCAAAPADTK-THMIRITGYDTSLP 163
Query: 505 ADEVKTCLKHHFSSCGDITHVFVSTLEKITNIYFHQEEGEAKALDLSGSEVGGFKIDVER 684
+++ L HFSSCG I V V IY E KAL+LSG +GG + VE
Sbjct: 164 KIDMQIALYKHFSSCGSIWKVIV-LKSGAAFIYLEGERCVDKALELSGRNMGGSTLVVEP 222
Query: 685 VATIFTNCPPPFPSSSPSDEIYYGYCIPAHMIE 783
V P P GY +P+ ++E
Sbjct: 223 VVP----RPDILKKRRPLACTTTGYTLPSTLLE 251
>gi|297851804|ref|XP_002893783.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 276
Score = 116 bits (290), Expect = 7e-024
Identities = 73/195 (37%), Positives = 104/195 (53%), Gaps = 9/195 (4%)
Frame = +1
Query: 118 VENNRCKPHTVISVEGYDTSLPEDDIKSELINHFKSCGEVFNVILREDPDSPNLDRRALV 297
V+ + C + I VEGYDTSL E D+K L HF SCGE+ ++ + D + L A +
Sbjct: 50 VQPSYCTSFSRICVEGYDTSLHEYDLKLALRKHFSSCGEITHIYVPRDFERNILKSFAFI 109
Query: 298 ILLGEGAEEKALQLNGTDIGGWKALVKVEPEEEEDEETQRYKSFLIDELTNDRRFWYGVT 477
+ GEGAEEKAL L+G+D GGW K P + + + R + R+ +
Sbjct: 110 HIAGEGAEEKALALSGSDAGGWNVFAKSSPYDGQYVDPGRATAESPRFSLPQRK----MI 165
Query: 478 VRGYNTSLPADEVKTCLKHHFSSCGDITHVFV-----STLEKITNIYFHQEEGEAKALDL 642
V GY+TSLP +++ L +HFSSCG+IT+V + L+ I KAL+L
Sbjct: 166 VTGYDTSLPEIDIQIRLSNHFSSCGEITNVMIPKDANGGLDSTALISILGAGSVEKALEL 225
Query: 643 SGSEVGGFKIDVERV 687
G +VGG+ I V V
Sbjct: 226 GGCDVGGWNIAVVTV 240
Score = 84 bits (207), Expect = 3e-014
Identities = 44/84 (52%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
Frame = +1
Query: 139 PHTVISVEGYDTSLPEDDIKSELINHFKSCGEVFNVILREDPDSPNLDRRALVILLGEGA 318
P + V GYDTSLPE DI+ L NHF SCGE+ NV++ +D + LD AL+ +LG G+
Sbjct: 160 PQRKMIVTGYDTSLPEIDIQIRLSNHFSSCGEITNVMIPKDANG-GLDSTALISILGAGS 218
Query: 319 EEKALQLNGTDIGGWK-ALVKVEP 387
EKAL+L G D+GGW A+V V P
Sbjct: 219 VEKALELGGCDVGGWNIAVVTVLP 242
>gi|297806309|ref|XP_002871038.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 248
Score = 112 bits (278), Expect = 2e-022
Identities = 71/181 (39%), Positives = 100/181 (55%), Gaps = 2/181 (1%)
Frame = +1
Query: 145 TVISVEGYDTSLPEDDIKSELINHFKSCGEVFNVILREDPDSPNLDRRALVILLGEGAEE 324
T +SVEGYDT L + +K L HF SCGE+ N+ + D + L A + + GEGAEE
Sbjct: 45 TTVSVEGYDTWLRKYPLKLVLEKHFASCGEITNIYVPTDFERGILKSVAFMRIEGEGAEE 104
Query: 325 KALQLNGTDIGGWKALVKVEPEEEEDEETQRYKSFLIDELTNDRRFWYGVTVRGYNTSLP 504
KALQL+GTD+GGW A+VK P ++ + Y D + + + V GY+TSLP
Sbjct: 105 KALQLSGTDVGGWTAIVKPAPSQKVFMDDPWYAGPRCAAAPADTK-THRIRVTGYDTSLP 163
Query: 505 ADEVKTCLKHHFSSCGDITHVFVSTLEKITNIYFHQEEGEAKALDLSGSEVGGFKIDVER 684
+++ L HFSSCG ++ V V + + E KAL+LS +GG + VE
Sbjct: 164 EIDMQIALCKHFSSCGYVSKVIVLS-SGAAFLCLKGERCVDKALELSRCNMGGRTLVVEP 222
Query: 685 V 687
V
Sbjct: 223 V 223
>gi|15242768|ref|NP_195968.1| RNA-binding (RRM/RBD/RNP motifs) family protein
[Arabidopsis thaliana]
Length = 321
Score = 105 bits (260), Expect = 2e-020
Identities = 71/174 (40%), Positives = 96/174 (55%), Gaps = 9/174 (5%)
Frame = +1
Query: 139 PHTVISVEGYDTSLPEDDIKSELINHFKSCGEVFNVILREDPDSPNLDRRALVILLGEGA 318
P T ISVEGYDTSL + ++ L HF SCGE+ +V + D + L A + + GEGA
Sbjct: 111 PITTISVEGYDTSLQKYLLELILEKHFDSCGEIRHVYVPTDYERGVLKSVAFLRIEGEGA 170
Query: 319 EEKALQLNGTDIGGWKALVKVEPEEEEDEETQRYKSFLIDELTNDRRFWYGVTVRGYNTS 498
E+KALQL+GTD+ GW +VK P E + + R + E + RF V GY+ S
Sbjct: 171 EDKALQLSGTDVVGWTVIVK--PSEIFYDNSSRAPA-TTPEASKIHRF----RVTGYDAS 223
Query: 499 LPADEVKTCLKHHFSSCGDITHVFVSTLEKITNIYFHQEEGEAKALDLSGSEVG 660
LP +++ L HFSSCG+I V V L + E KAL+LSG +G
Sbjct: 224 LPEIDIQMALCKHFSSCGEIWQVTV--LSSTAFVSLRGERCVDKALELSGCNMG 275
Score = 85 bits (208), Expect = 2e-014
Identities = 41/95 (43%), Positives = 60/95 (63%)
Frame = +1
Query: 112 EIVENNRCKPHTVISVEGYDTSLPEDDIKSELINHFKSCGEVFNVILREDPDSPNLDRRA 291
E+ ++++ T I VEGYDTSL E ++ L HF SCGE+ + + D L +
Sbjct: 13 ELNDSDKQSTSTAICVEGYDTSLKEYPLRLALTKHFASCGEITQIYVPRDFKKKILKSVS 72
Query: 292 LVILLGEGAEEKALQLNGTDIGGWKALVKVEPEEE 396
+ + GEGAE+KALQL+GTD+GGW +VK +P+ E
Sbjct: 73 FMWIKGEGAEDKALQLSGTDVGGWTVIVKPKPKHE 107
>gi|297788547|ref|XP_002862358.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 131
Score = 84 bits (205), Expect = 5e-014
Identities = 39/85 (45%), Positives = 57/85 (67%), Gaps = 4/85 (4%)
Frame = +1
Query: 148 VISVEGYDTSLPEDDIKSELINHFKSCGEVFNVILREDPDSPNLDRRALVILLGEGAEEK 327
VI VEG+DTS+P D+++ LINHFKSCG + +R PD + A ++++G+ A+EK
Sbjct: 39 VIDVEGFDTSVPADEMEEALINHFKSCGAILRASVRRHPD----NGLANIVMVGDDADEK 94
Query: 328 ALQLNGTDIGGWKALVKVEPEEEED 402
+QLNGT++GG K +VK P D
Sbjct: 95 VMQLNGTELGGKKLVVKARPYPRMD 119
>gi|297798354|ref|XP_002867061.1| hypothetical protein ARALYDRAFT_912803
[Arabidopsis lyrata subsp. lyrata]
Length = 132
Score = 84 bits (205), Expect = 5e-014
Identities = 39/85 (45%), Positives = 57/85 (67%), Gaps = 4/85 (4%)
Frame = +1
Query: 148 VISVEGYDTSLPEDDIKSELINHFKSCGEVFNVILREDPDSPNLDRRALVILLGEGAEEK 327
VI VEG+DTS+P D+++ LINHFKSCG + +R PD + A ++++G+ A+EK
Sbjct: 40 VIDVEGFDTSVPADEMEEALINHFKSCGAILRASVRRHPD----NGLANIVMVGDDADEK 95
Query: 328 ALQLNGTDIGGWKALVKVEPEEEED 402
+QLNGT++GG K +VK P D
Sbjct: 96 VMQLNGTELGGKKLVVKARPYPRMD 120
>gi|297819148|ref|XP_002877457.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 184
Score = 83 bits (203), Expect = 8e-014
Identities = 54/158 (34%), Positives = 80/158 (50%), Gaps = 7/158 (4%)
Frame = +1
Query: 232 EVFNVILREDPDSPNLDRRALVILLGEGAEEKALQLNGTDIGGWKALVKVEPEEEEDEET 411
E + L D +S L R A + + GE A EKAL+L+GTD+GGW A+VK P ++E +
Sbjct: 27 EGYATSLHADYESGTLKRVAFMRIEGENANEKALELSGTDVGGWTAIVKAAPWQKEVMD- 85
Query: 412 QRYKSFLIDELTNDRRFWYGVTVRGYNTSLPADEVKTCLKHHFSSCGDITHVFVSTLEKI 591
+ R + V V GY+TSLP +++ + SSCG++ + V L
Sbjct: 86 ----PWCPASAAAARPKEHSVNVTGYDTSLPEIDIEMAVCEFLSSCGEVARIMV--LPSH 139
Query: 592 TNIYFHQEEGEAKALDLSGSEVGGFKIDVERVATIFTN 705
+ E KAL LSG VGG ++V+ V + N
Sbjct: 140 ARVSIIGEGCVDKALQLSGCNVGGITLEVKPVVLVKIN 177
>gi|297806867|ref|XP_002871317.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 313
Score = 80 bits (197), Expect = 4e-013
Identities = 42/89 (47%), Positives = 59/89 (66%), Gaps = 11/89 (12%)
Frame = +1
Query: 151 ISVEGYDTSLPEDDIKSELINHFKSCGEVFNVILREDPDSPNLDRRALVILLGEGAEEKA 330
ISV GYDT LPEDD+K+ L HF+SCGEV ++ +R A + ++GEGA +KA
Sbjct: 227 ISVTGYDTLLPEDDLKTALSKHFRSCGEVTDISIRRS--------SAFIYIMGEGAGDKA 278
Query: 331 LQLNGTDI-GGWKALVKVE--PEEEEDEE 408
+L+G+D+ GGWK + KV+ P E DE+
Sbjct: 279 TELSGSDMGGGWKVVAKVDSVPGEYHDED 307
>gi|297810419|ref|XP_002873093.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 161
Score = 80 bits (197), Expect = 4e-013
Identities = 39/84 (46%), Positives = 55/84 (65%)
Frame = +1
Query: 145 TVISVEGYDTSLPEDDIKSELINHFKSCGEVFNVILREDPDSPNLDRRALVILLGEGAEE 324
T ISVEGY+T+L E ++ L HF SCG++ + + D L R + V + G+ AEE
Sbjct: 29 TAISVEGYNTTLKEYPLRLALAKHFASCGKITQIYVPRDFKKKLLKRASFVWIEGDDAEE 88
Query: 325 KALQLNGTDIGGWKALVKVEPEEE 396
KALQL+GTD+GGW A+VK P ++
Sbjct: 89 KALQLSGTDVGGWTAIVKPVPSQK 112
>gi|145334285|ref|NP_001078524.1| RNA-binding (RRM/RBD/RNP motifs) family
protein [Arabidopsis thaliana]
Length = 226
Score = 77 bits (189), Expect = 4e-012
Identities = 40/80 (50%), Positives = 51/80 (63%)
Frame = +1
Query: 139 PHTVISVEGYDTSLPEDDIKSELINHFKSCGEVFNVILREDPDSPNLDRRALVILLGEGA 318
P T ISVEGYDT L E +K L HF SCG++ ++ + D + L A + + GEG
Sbjct: 27 PWTKISVEGYDTRLREYTVKLVLEKHFASCGKITHIYVPRDFERGILKSVAFMCIKGEGG 86
Query: 319 EEKALQLNGTDIGGWKALVK 378
EEKAL L+GTD GGW A+VK
Sbjct: 87 EEKALLLSGTDAGGWTAIVK 106
>gi|7378635|emb|CAB83311.1| putative protein [Arabidopsis thaliana]
Length = 248
Score = 69 bits (168), Expect = 1e-009
Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Frame = +1
Query: 118 VENNRCKPHTVISVEGYDTSLPEDDIKSELINHFKSCGEVFNVILREDPDSPNLDRRALV 297
+E + CK + GYDT L E +K L HF SCG++ ++ + D + L A +
Sbjct: 6 IERDWCK---LSKAPGYDTRLREYTVKLVLEKHFASCGKITHIYVPRDFERGILKSVAFM 62
Query: 298 ILLGEGAEEKALQLNGTDIGGWKALVK 378
+ GEG EEKAL L+GTD GGW A+VK
Sbjct: 63 CIKGEGGEEKALLLSGTDAGGWTAIVK 89
>gi|297818940|ref|XP_002877353.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 122
Score = 62 bits (148), Expect = 2e-007
Identities = 28/58 (48%), Positives = 41/58 (70%)
Frame = +1
Query: 205 LINHFKSCGEVFNVILREDPDSPNLDRRALVILLGEGAEEKALQLNGTDIGGWKALVK 378
L HF SCG++ ++ + D +S L R A + + GEGAE+KAL+L+GTD+GGW A+ K
Sbjct: 13 LRKHFSSCGKIKHIYVPRDFESGTLKRVAFMRIEGEGAEDKALELSGTDVGGWTAIEK 70
>gi|297828670|ref|XP_002882217.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 195
Score = 60 bits (144), Expect = 6e-007
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +1
Query: 139 PHTVISVEGYDTSLPEDDIKSELINHFKSCGEVFNVILREDPDSPNLDRRALVILLGEGA 318
P I VEGYDTS+ E D++ L HF SCGE+ ++ + + + L A V EGA
Sbjct: 15 PKDRIRVEGYDTSIYEYDLELALTKHFSSCGEISHIYIPRNFEKGILKSFAFVDFATEGA 74
Query: 319 EEKALQLNGTDI-GGWKALVKVEP 387
EKAL L+ + + GGW+ + P
Sbjct: 75 VEKALNLSRSAVEGGWRVFAEESP 98
>gi|15233825|ref|NP_194173.1| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 87
Score = 59 bits (140), Expect = 2e-006
Identities = 26/65 (40%), Positives = 41/65 (63%)
Frame = +1
Query: 193 IKSELINHFKSCGEVFNVILREDPDSPNLDRRALVILLGEGAEEKALQLNGTDIGGWKAL 372
+K L NHFKSCG + V R P++ ++ A + ++G A+EK + LNG+++GG K +
Sbjct: 1 MKEALTNHFKSCGVIAMVSFRRHPETDVVNGLATITMMGNDADEKVMLLNGSELGGRKLV 60
Query: 373 VKVEP 387
VK P
Sbjct: 61 VKANP 65
>gi|242080817|ref|XP_002445177.1| hypothetical protein SORBIDRAFT_07g005510
[Sorghum bicolor]
Length = 647
Score = 58 bits (138), Expect = 3e-006
Identities = 31/84 (36%), Positives = 47/84 (55%)
Frame = +1
Query: 151 ISVEGYDTSLPEDDIKSELINHFKSCGEVFNVILREDPDSPNLDRRALVILLGEGAEEKA 330
I V G+D L ED+I+S L HFK CG++ V + D +S + A + + + KA
Sbjct: 483 IFVRGFDKELSEDEIRSALQEHFKKCGDITRVSIPTDYESGAIKGMAYMDFKDQDSVSKA 542
Query: 331 LQLNGTDIGGWKALVKVEPEEEED 402
++L+GTDIGG L E + + D
Sbjct: 543 IELSGTDIGGGYELYVDEAKPKGD 566
>gi|212724137|ref|NP_001132813.1| hypothetical protein LOC100194303 [Zea mays]
Length = 303
Score = 57 bits (135), Expect = 6e-006
Identities = 30/84 (35%), Positives = 46/84 (54%)
Frame = +1
Query: 151 ISVEGYDTSLPEDDIKSELINHFKSCGEVFNVILREDPDSPNLDRRALVILLGEGAEEKA 330
I + G+D +L ED+I+S L HF CGE+ V + D +S + A + + + KA
Sbjct: 99 IFIRGFDKNLSEDEIRSSLEQHFSDCGEMTRVSIPTDHESGAIKGMAYIDFKDQDSVSKA 158
Query: 331 LQLNGTDIGGWKALVKVEPEEEED 402
L+L+G+DIGG L E + D
Sbjct: 159 LELSGSDIGGGYELYVDEAKPRGD 182
>gi|223943677|gb|ACN25922.1| unknown [Zea mays]
Length = 383
Score = 57 bits (135), Expect = 6e-006
Identities = 30/84 (35%), Positives = 46/84 (54%)
Frame = +1
Query: 151 ISVEGYDTSLPEDDIKSELINHFKSCGEVFNVILREDPDSPNLDRRALVILLGEGAEEKA 330
I + G+D +L ED+I+S L HF CGE+ V + D +S + A + + + KA
Sbjct: 220 IFIRGFDKNLSEDEIRSSLEQHFSDCGEMTRVSIPTDHESGAIKGMAYIDFKDQDSVSKA 279
Query: 331 LQLNGTDIGGWKALVKVEPEEEED 402
L+L+G+DIGG L E + D
Sbjct: 280 LELSGSDIGGGYELYVDEAKPRGD 303
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,844,195,214,508
Number of Sequences: 15229318
Number of Extensions: 2844195214508
Number of Successful Extensions: 670869000
Number of sequences better than 0.0: 0
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