BLASTX 7.6.2
Query= UN23536 /QuerySize=1119
(1118 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G03480.1 | Symbols: | nucleic acid binding / ... 105 8e-023
TAIR9_protein||AT5G03495.1 | Symbols: | nucleotide binding | ch... 77 1e-014
TAIR9_protein||AT3G09160.1 | Symbols: | RNA recognition motif (... 72 4e-013
TAIR9_protein||AT5G53700.1 | Symbols: | INVOLVED IN: biological... 72 6e-013
TAIR9_protein||AT1G48920.1 | Symbols: ATNUC-L1, PARL1 | ATNUC-L1... 69 6e-012
TAIR9_protein||AT4G24420.1 | Symbols: | RNA recognition motif (... 59 7e-009
TAIR9_protein||AT3G18610.1 | Symbols: ATRANGAP1, PARLL1 | ATRANG... 57 2e-008
TAIR9_protein||AT1G72800.1 | Symbols: | nuM1-related | chr1:273... 54 2e-007
TAIR9_protein||AT1G73490.1 | Symbols: | RNA recognition motif (... 53 3e-007
TAIR9_protein||AT5G05430.1 | Symbols: | FUNCTIONS IN: molecular... 48 9e-006
>TAIR9_protein||AT5G03480.1 | Symbols: | nucleic acid binding / nucleotide
binding | chr5:869208-870855 REVERSE
Length = 322
Score = 105 bits (260), Expect = 8e-023
Identities = 71/174 (40%), Positives = 96/174 (55%), Gaps = 9/174 (5%)
Frame = +1
Query: 139 PHTVISVEGYDTSLPEDDIKSELINHFKSCGEVFNVILREDPDSPNLDRRALVILLGEGA 318
P T ISVEGYDTSL + ++ L HF SCGE+ +V + D + L A + + GEGA
Sbjct: 111 PITTISVEGYDTSLQKYLLELILEKHFDSCGEIRHVYVPTDYERGVLKSVAFLRIEGEGA 170
Query: 319 EEKALQLNGTDIGGWKALVKVEPEEEEDEETQRYKSFLIDELTNDRRFWYGVTVRGYNTS 498
E+KALQL+GTD+ GW +VK P E + + R + E + RF V GY+ S
Sbjct: 171 EDKALQLSGTDVVGWTVIVK--PSEIFYDNSSRAPA-TTPEASKIHRF----RVTGYDAS 223
Query: 499 LPADEVKTCLKHHFSSCGDITHVFVSTLEKITNIYFHQEEGEAKALDLSGSEVG 660
LP +++ L HFSSCG+I V V L + E KAL+LSG +G
Sbjct: 224 LPEIDIQMALCKHFSSCGEIWQVTV--LSSTAFVSLRGERCVDKALELSGCNMG 275
Score = 85 bits (208), Expect = 9e-017
Identities = 41/95 (43%), Positives = 60/95 (63%)
Frame = +1
Query: 112 EIVENNRCKPHTVISVEGYDTSLPEDDIKSELINHFKSCGEVFNVILREDPDSPNLDRRA 291
E+ ++++ T I VEGYDTSL E ++ L HF SCGE+ + + D L +
Sbjct: 13 ELNDSDKQSTSTAICVEGYDTSLKEYPLRLALTKHFASCGEITQIYVPRDFKKKILKSVS 72
Query: 292 LVILLGEGAEEKALQLNGTDIGGWKALVKVEPEEE 396
+ + GEGAE+KALQL+GTD+GGW +VK +P+ E
Sbjct: 73 FMWIKGEGAEDKALQLSGTDVGGWTVIVKPKPKHE 107
>TAIR9_protein||AT5G03495.1 | Symbols: | nucleotide binding |
chr5:873804-875025 REVERSE
Length = 227
Score = 77 bits (189), Expect = 1e-014
Identities = 40/80 (50%), Positives = 51/80 (63%)
Frame = +1
Query: 139 PHTVISVEGYDTSLPEDDIKSELINHFKSCGEVFNVILREDPDSPNLDRRALVILLGEGA 318
P T ISVEGYDT L E +K L HF SCG++ ++ + D + L A + + GEG
Sbjct: 27 PWTKISVEGYDTRLREYTVKLVLEKHFASCGKITHIYVPRDFERGILKSVAFMCIKGEGG 86
Query: 319 EEKALQLNGTDIGGWKALVK 378
EEKAL L+GTD GGW A+VK
Sbjct: 87 EEKALLLSGTDAGGWTAIVK 106
Score = 62 bits (150), Expect = 5e-010
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 10/89 (11%)
Frame = +1
Query: 151 ISVEGYDTSLPEDDIKSELINHFKSCGEVFNVILREDPDSPNLDRRALVILLGEGAEEKA 330
+ V GYDT +P+ DI+ L HF SCGEV V++ + L GE E+KA
Sbjct: 130 VRVTGYDTCVPKIDIQMALCEHFSSCGEVTQVVVLPSGSGS-------IYLQGERCEDKA 182
Query: 331 LQLNGTDIGGWKALVK---VEPEEEEDEE 408
LQLNG +GG +V+ +EPE+ + E+
Sbjct: 183 LQLNGCKMGGMNLVVESVLIEPEDLKKEK 211
Score = 55 bits (130), Expect = 9e-008
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +1
Query: 472 VTVRGYNTSLPADEVKTCLKHHFSSCGDITHVFVSTLEKITNIYFHQEEGEAKALDLSGS 651
V V GY+T +P +++ L HFSSCG++T V V +IY E E KAL L+G
Sbjct: 130 VRVTGYDTCVPKIDIQMALCEHFSSCGEVTQVVVLP-SGSGSIYLQGERCEDKALQLNGC 188
Query: 652 EVGGFKIDVERV 687
++GG + VE V
Sbjct: 189 KMGGMNLVVESV 200
>TAIR9_protein||AT3G09160.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:2805779-2806912 REVERSE
Length = 199
Score = 72 bits (176), Expect = 4e-013
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +1
Query: 151 ISVEGYDTSLPEDDIKSELINHFKSCGEVFNVILREDPDSPNLDRRALVILLGEGAEEKA 330
ISV GYD LP + ++SEL F CGE+ +V + E +S +L A + +GEG +KA
Sbjct: 25 ISVTGYDIELPREHVESELKKLFSPCGEITDVHIPETRNS-SLWSHAFIYFVGEGTADKA 83
Query: 331 LQLNGTDIGGWKALVKVEPEEEEDE 405
LQLNG+D+GGW + +P +E++
Sbjct: 84 LQLNGSDMGGWTVDAEADPFPKEED 108
>TAIR9_protein||AT5G53700.1 | Symbols: | INVOLVED IN: biological_process
unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis
thaliana protein match is: nucleic acid binding / nucleotide binding
(TAIR:AT5G03480.1); Has 74 Blast hits to 54 proteins in 11 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 68; Viruses
- 0; Other Eukaryotes - 6 (source: NCBI BLink). |
chr5:21801221-21802546 FORWARD
Length = 252
Score = 72 bits (175), Expect = 6e-013
Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Frame = +1
Query: 91 ESEAAGEEIVENNRCKPHTVISVEGYDTSLPEDDIKSELINHFKSCGEVFNVILREDPDS 270
ES G E + N K + ISVEGYDTS+ E +K L HF SCG++ ++ + D
Sbjct: 3 ESAVRGLESKDTNNRKCFSKISVEGYDTSVHEFPLKLALAKHFASCGKIVDIDVPRDFKK 62
Query: 271 PNLDRRALVIL---LGEGAEEKALQLNGTDIGGWKALVKVEPEEE 396
L +I GE +KAL+L+GTD+GGW +VK P ++
Sbjct: 63 RILKSPLFIIFHAKEGESPVDKALELSGTDVGGWNVVVKSLPGQQ 107
Score = 50 bits (119), Expect = 2e-006
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Frame = +1
Query: 127 NRCKPHTVISVEGYDT--SLPEDDIKSELINHFKSCGEVFNVILREDPDSPNLDRRALVI 300
+R K + V+ YDT +L + D++ L HF SCGEV + + + + +A V
Sbjct: 116 DRFKGERTLIVKVYDTPSTLSKIDLQIGLCKHFSSCGEVTGISVLVHGNLCCHESKARVD 175
Query: 301 LLGEGAEEKALQLNGTDIGGWKALV 375
++G+G +KAL+L+G GWK +V
Sbjct: 176 IMGKGCVDKALELSGRTADGWKIVV 200
>TAIR9_protein||AT1G48920.1 | Symbols: ATNUC-L1, PARL1 | ATNUC-L1; nucleic acid
binding / nucleotide binding | chr1:18098186-18101422 FORWARD
Length = 558
Score = 69 bits (166), Expect = 6e-012
Identities = 39/84 (46%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Frame = +1
Query: 151 ISVEGYDTSLPEDDIKSELINHFKSCGEVFNVILREDPDSPNLDRRALVILLGEGAEEKA 330
I V+G+D SL EDDIK+ L HF SCGE+ NV + D D+ N + + L +EKA
Sbjct: 403 IFVKGFDASLSEDDIKNTLREHFSSCGEIKNVSVPIDRDTGN--SKGIAYLEFSEGKEKA 460
Query: 331 LQLNGTDIGGWKALVKVEPEEEED 402
L+LNG+D+GG LV EP D
Sbjct: 461 LELNGSDMGGGFYLVVDEPRPRGD 484
Score = 66 bits (159), Expect = 4e-011
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 11/164 (6%)
Frame = +1
Query: 196 KSELINHFKSCGEVFNVILREDPDSPNLDRRALVILLGEGAEEKALQLNGTDIGGWKALV 375
++++ N FK GEV +V + D + V +KAL+ +G + G + +
Sbjct: 310 RADVENFFKEAGEVVDVRFSTNRDDGSFRGFGHVEFASSEEAQKALEFHGRPLLGREIRL 369
Query: 376 KVEPEEEEDEE----TQRYKSFLIDELTNDRRFWYGVTVRGYNTSLPADEVKTCLKHHFS 543
+ E E E T + +F D + + V+G++ SL D++K L+ HFS
Sbjct: 370 DIAQERGERGERPAFTPQSGNFRSGGDGGDEK---KIFVKGFDASLSEDDIKNTLREHFS 426
Query: 544 SCGDITHVFVSTLEKITN----IYFHQEEGEAKALDLSGSEVGG 663
SCG+I +V V N Y EG+ KAL+L+GS++GG
Sbjct: 427 SCGEIKNVSVPIDRDTGNSKGIAYLEFSEGKEKALELNGSDMGG 470
>TAIR9_protein||AT4G24420.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr4:12627096-12627359 FORWARD
Length = 88
Score = 59 bits (140), Expect = 7e-009
Identities = 26/65 (40%), Positives = 41/65 (63%)
Frame = +1
Query: 193 IKSELINHFKSCGEVFNVILREDPDSPNLDRRALVILLGEGAEEKALQLNGTDIGGWKAL 372
+K L NHFKSCG + V R P++ ++ A + ++G A+EK + LNG+++GG K +
Sbjct: 1 MKEALTNHFKSCGVIAMVSFRRHPETDVVNGLATITMMGNDADEKVMLLNGSELGGRKLV 60
Query: 373 VKVEP 387
VK P
Sbjct: 61 VKANP 65
>TAIR9_protein||AT3G18610.1 | Symbols: ATRANGAP1, PARLL1 | ATRANGAP1 (RAN
GTPASE-ACTIVATING PROTEIN 1); nucleic acid binding / nucleotide binding
| chr3:6404270-6407822 REVERSE
Length = 637
Score = 57 bits (136), Expect = 2e-008
Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Frame = +1
Query: 472 VTVRGYNTSLPADEVKTCLKHHFSSCGDITHVFVSTLEKITN-----IYFHQEEGEAKAL 636
+ VRG+++SL DE+K L+ HFS CG++T V V T ++ T Y G +AL
Sbjct: 481 IYVRGFSSSLGEDEIKKELRSHFSKCGEVTRVHVPT-DRETGASRGFAYIDLTSGFDEAL 539
Query: 637 DLSGSEVGGFKIDVE 681
LSGSE+GG I VE
Sbjct: 540 QLSGSEIGGGNIHVE 554
Score = 55 bits (130), Expect = 9e-008
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Frame = +1
Query: 151 ISVEGYDTSLPEDDIKSELINHFKSCGEVFNVILREDPDSPNLDRRALVILLGEGAEEKA 330
I V G+ +SL ED+IK EL +HF CGEV V + D ++ R I L G +E A
Sbjct: 481 IYVRGFSSSLGEDEIKKELRSHFSKCGEVTRVHVPTDRET-GASRGFAYIDLTSGFDE-A 538
Query: 331 LQLNGTDIGGWKALVKVEPEEEEDE 405
LQL+G++IGG V+ + DE
Sbjct: 539 LQLSGSEIGGGNIHVEESRPRDSDE 563
>TAIR9_protein||AT1G72800.1 | Symbols: | nuM1-related | chr1:27397266-27398273
FORWARD
Length = 336
Score = 54 bits (127), Expect = 2e-007
Identities = 37/79 (46%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Frame = +1
Query: 154 SVEGYDTSLPEDDIKSELINHFKSCGEVFNVILREDPDSPNLDRRALVILLGEGAEEKAL 333
SV G+D SLP DDIKS L +F S GE+ V + + A I L EGA EKAL
Sbjct: 237 SVTGFDASLPVDDIKSALSKYFSSFGEITRVFVPPSHGTGGSLGYA-YIDLKEGA-EKAL 294
Query: 334 QLNGTDIGGWKALV-KVEP 387
+L D+GGW +V K EP
Sbjct: 295 ELGRHDVGGWDLVVGKAEP 313
>TAIR9_protein||AT1G73490.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:27633496-27634867 REVERSE
Length = 260
Score = 53 bits (126), Expect = 3e-007
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Frame = +1
Query: 478 VRGYNTSLPADEVKTCLKHHFSSCGDITHVFV---STLEKITNIYFHQEEGEAKALDLSG 648
V+G++TS P E+KT L +HFSSCG + ++V + F + E K L L+G
Sbjct: 121 VQGFDTSHPRHEIKTALWNHFSSCGKVYLIYVPIACSTGASVGYAFIDMKNETKGLTLNG 180
Query: 649 SEVGGFKIDV 678
S +GG KIDV
Sbjct: 181 SHLGGRKIDV 190
>TAIR9_protein||AT5G05430.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: stem, leaf; EXPRESSED DURING:
LP.04 four leaves visible; BEST Arabidopsis thaliana protein match is:
RNA recognition motif (RRM)-containing protein (TAIR:AT3G09160.1); Has
23 Blast hits to 21 proteins in 1 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr5:1605275-1606703 REVERSE
Length = 159
Score = 48 bits (113), Expect = 9e-006
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Frame = +1
Query: 151 ISVEGYDTSLPEDDIKSELINHFKSCGEVFNVILREDPDSPN-LDRRALVILLGEGAEEK 327
I V GYDT LP DD+ + L HF SCGE++ + + D N + R +L
Sbjct: 25 IKVTGYDTGLPLDDLYTALAEHFSSCGEIWEIYIPLKFDETNTILNRFWWLLPPPFLSNS 84
Query: 328 ALQLNGTDIGGWKALVKVEP 387
+ Q+N +GGW V+ P
Sbjct: 85 SAQVN---VGGWNVSVEAYP 101
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,186,182,936
Number of Sequences: 33410
Number of Extensions: 12186182936
Number of Successful Extensions: 391856999
Number of sequences better than 0.0: 0
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