BLASTX 7.6.2
Query= UN23556 /QuerySize=878
(877 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G02560.1 | Symbols: | 40S ribosomal protein S... 346 2e-095
TAIR9_protein||AT3G02560.2 | Symbols: | 40S ribosomal protein S... 346 2e-095
TAIR9_protein||AT5G16130.1 | Symbols: | 40S ribosomal protein S... 337 9e-093
TAIR9_protein||AT1G48830.1 | Symbols: | 40S ribosomal protein S... 308 4e-084
TAIR9_protein||AT1G48830.2 | Symbols: | 40S ribosomal protein S... 308 4e-084
>TAIR9_protein||AT3G02560.1 | Symbols: | 40S ribosomal protein S7 (RPS7B) |
chr3:542341-543168 FORWARD
Length = 192
Score = 346 bits (885), Expect = 2e-095
Identities = 173/192 (90%), Positives = 182/192 (94%)
Frame = +1
Query: 100 MFSAQNKIHKDKGVAPTEFEERVAQAFFDLENTNQELKSDLKDLYINQAVSMDIAGNRKA 279
M+S QNKIHKDKGVAPTEFEE+V QA FDLENTNQELKS+LKDLYINQAV MDI+GNRKA
Sbjct: 1 MYSGQNKIHKDKGVAPTEFEEQVTQALFDLENTNQELKSELKDLYINQAVQMDISGNRKA 60
Query: 280 VVIYVPFRLRKAFRKIHPRLVRELEKKFSGNDVIFVATRRIMRPPKKGSAVQRPRNRTLT 459
VVIYVPFRLRKAFRKIH RLVRELEKKFSG DVIFVATRRIMRPPKKGSAVQRPRNRTLT
Sbjct: 61 VVIYVPFRLRKAFRKIHLRLVRELEKKFSGKDVIFVATRRIMRPPKKGSAVQRPRNRTLT 120
Query: 460 SVHEAMLEDVAYPAEIVGKRTRYRVDGTKIMKVYLEPKERNNTEYKLETMVGVYRKLTGK 639
SVHEAMLEDVAYPAEIVGKRTRYR+DGTKIMKV+L+ K +N+TEYKLETMVGVYRKLTGK
Sbjct: 121 SVHEAMLEDVAYPAEIVGKRTRYRLDGTKIMKVFLDSKLKNDTEYKLETMVGVYRKLTGK 180
Query: 640 DVVFEYPVAEA* 675
DVVFEYPV EA*
Sbjct: 181 DVVFEYPVIEA* 192
>TAIR9_protein||AT3G02560.2 | Symbols: | 40S ribosomal protein S7 (RPS7B) |
chr3:542341-543168 FORWARD
Length = 192
Score = 346 bits (885), Expect = 2e-095
Identities = 173/192 (90%), Positives = 182/192 (94%)
Frame = +1
Query: 100 MFSAQNKIHKDKGVAPTEFEERVAQAFFDLENTNQELKSDLKDLYINQAVSMDIAGNRKA 279
M+S QNKIHKDKGVAPTEFEE+V QA FDLENTNQELKS+LKDLYINQAV MDI+GNRKA
Sbjct: 1 MYSGQNKIHKDKGVAPTEFEEQVTQALFDLENTNQELKSELKDLYINQAVQMDISGNRKA 60
Query: 280 VVIYVPFRLRKAFRKIHPRLVRELEKKFSGNDVIFVATRRIMRPPKKGSAVQRPRNRTLT 459
VVIYVPFRLRKAFRKIH RLVRELEKKFSG DVIFVATRRIMRPPKKGSAVQRPRNRTLT
Sbjct: 61 VVIYVPFRLRKAFRKIHLRLVRELEKKFSGKDVIFVATRRIMRPPKKGSAVQRPRNRTLT 120
Query: 460 SVHEAMLEDVAYPAEIVGKRTRYRVDGTKIMKVYLEPKERNNTEYKLETMVGVYRKLTGK 639
SVHEAMLEDVAYPAEIVGKRTRYR+DGTKIMKV+L+ K +N+TEYKLETMVGVYRKLTGK
Sbjct: 121 SVHEAMLEDVAYPAEIVGKRTRYRLDGTKIMKVFLDSKLKNDTEYKLETMVGVYRKLTGK 180
Query: 640 DVVFEYPVAEA* 675
DVVFEYPV EA*
Sbjct: 181 DVVFEYPVIEA* 192
>TAIR9_protein||AT5G16130.1 | Symbols: | 40S ribosomal protein S7 (RPS7C) |
chr5:5268984-5269912 FORWARD
Length = 191
Score = 337 bits (862), Expect = 9e-093
Identities = 168/188 (89%), Positives = 178/188 (94%)
Frame = +1
Query: 100 MFSAQNKIHKDKGVAPTEFEERVAQAFFDLENTNQELKSDLKDLYINQAVSMDIAGNRKA 279
MFSAQNKI KDK PTE EE+VAQA FDLENTNQELKS+LKDLYINQAV MDI+GNRKA
Sbjct: 1 MFSAQNKIKKDKNAEPTECEEQVAQALFDLENTNQELKSELKDLYINQAVHMDISGNRKA 60
Query: 280 VVIYVPFRLRKAFRKIHPRLVRELEKKFSGNDVIFVATRRIMRPPKKGSAVQRPRNRTLT 459
VVIYVPFRLRKAFRKIHPRLVRELEKKFSG DVIFV TRRIMRPPKKG+AVQRPRNRTLT
Sbjct: 61 VVIYVPFRLRKAFRKIHPRLVRELEKKFSGKDVIFVTTRRIMRPPKKGAAVQRPRNRTLT 120
Query: 460 SVHEAMLEDVAYPAEIVGKRTRYRVDGTKIMKVYLEPKERNNTEYKLETMVGVYRKLTGK 639
SVHEAMLEDVA+PAEIVGKRTRYR+DG+KIMKV+L+ KE+NNTEYKLETMVGVYRKLTGK
Sbjct: 121 SVHEAMLEDVAFPAEIVGKRTRYRLDGSKIMKVFLDAKEKNNTEYKLETMVGVYRKLTGK 180
Query: 640 DVVFEYPV 663
DVVFEYPV
Sbjct: 181 DVVFEYPV 188
>TAIR9_protein||AT1G48830.1 | Symbols: | 40S ribosomal protein S7 (RPS7A) |
chr1:18059854-18060935 REVERSE
Length = 192
Score = 308 bits (787), Expect = 4e-084
Identities = 148/192 (77%), Positives = 173/192 (90%)
Frame = +1
Query: 100 MFSAQNKIHKDKGVAPTEFEERVAQAFFDLENTNQELKSDLKDLYINQAVSMDIAGNRKA 279
MFSAQ+KIHK+KGV +E +E+VAQAFFDLENTNQELKS+LKDLY+N AV +DI+G RKA
Sbjct: 1 MFSAQHKIHKEKGVELSELDEQVAQAFFDLENTNQELKSELKDLYVNSAVQVDISGGRKA 60
Query: 280 VVIYVPFRLRKAFRKIHPRLVRELEKKFSGNDVIFVATRRIMRPPKKGSAVQRPRNRTLT 459
+V+ VP+RLRKA+RKIH RLVRELEKKFSG DVI +ATRRI+RPPKKGSA +RPRNRTLT
Sbjct: 61 IVVNVPYRLRKAYRKIHVRLVRELEKKFSGKDVILIATRRIVRPPKKGSAAKRPRNRTLT 120
Query: 460 SVHEAMLEDVAYPAEIVGKRTRYRVDGTKIMKVYLEPKERNNTEYKLETMVGVYRKLTGK 639
SVHEA+L+DV PAEIVGKRTRYR+DGTKIMKV+L+PKERNNTEYK+E VY+KLTGK
Sbjct: 121 SVHEAILDDVVLPAEIVGKRTRYRLDGTKIMKVFLDPKERNNTEYKVEAFSAVYKKLTGK 180
Query: 640 DVVFEYPVAEA* 675
DVVFE+P+ EA*
Sbjct: 181 DVVFEFPITEA* 192
>TAIR9_protein||AT1G48830.2 | Symbols: | 40S ribosomal protein S7 (RPS7A) |
chr1:18059854-18060935 REVERSE
Length = 192
Score = 308 bits (787), Expect = 4e-084
Identities = 148/192 (77%), Positives = 173/192 (90%)
Frame = +1
Query: 100 MFSAQNKIHKDKGVAPTEFEERVAQAFFDLENTNQELKSDLKDLYINQAVSMDIAGNRKA 279
MFSAQ+KIHK+KGV +E +E+VAQAFFDLENTNQELKS+LKDLY+N AV +DI+G RKA
Sbjct: 1 MFSAQHKIHKEKGVELSELDEQVAQAFFDLENTNQELKSELKDLYVNSAVQVDISGGRKA 60
Query: 280 VVIYVPFRLRKAFRKIHPRLVRELEKKFSGNDVIFVATRRIMRPPKKGSAVQRPRNRTLT 459
+V+ VP+RLRKA+RKIH RLVRELEKKFSG DVI +ATRRI+RPPKKGSA +RPRNRTLT
Sbjct: 61 IVVNVPYRLRKAYRKIHVRLVRELEKKFSGKDVILIATRRIVRPPKKGSAAKRPRNRTLT 120
Query: 460 SVHEAMLEDVAYPAEIVGKRTRYRVDGTKIMKVYLEPKERNNTEYKLETMVGVYRKLTGK 639
SVHEA+L+DV PAEIVGKRTRYR+DGTKIMKV+L+PKERNNTEYK+E VY+KLTGK
Sbjct: 121 SVHEAILDDVVLPAEIVGKRTRYRLDGTKIMKVFLDPKERNNTEYKVEAFSAVYKKLTGK 180
Query: 640 DVVFEYPVAEA* 675
DVVFE+P+ EA*
Sbjct: 181 DVVFEFPITEA* 192
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,186,182,936
Number of Sequences: 33410
Number of Extensions: 12186182936
Number of Successful Extensions: 391856999
Number of sequences better than 0.0: 0
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