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TAIR blast output of UN23562


BLASTX 7.6.2

Query= UN23562 /QuerySize=17829
        (17828 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||ATCG01130.1 | Symbols: YCF1.2 | hypothetical prot...   2176   0.0
TAIR9_protein||ATCG01110.1 | Symbols: NDHH | Encodes the 49KDa p...    803   1e-231
TAIR9_protein||ATCG01100.1 | Symbols: NDHA | NADH dehydrogenase ...    695   4e-199
TAIR9_protein||ATCG01000.1 | Symbols: YCF1.1 | hypothetical prot...    668   4e-191
TAIR9_protein||ATMG00370.1 | Symbols: ORF199 | hypothetical prot...    340   2e-092
TAIR9_protein||AT2G07739.1 | Symbols:  | FUNCTIONS IN: molecular...    338   1e-091
TAIR9_protein||ATMG00510.1 | Symbols: NAD7 | NADH dehydrogenase ...    266   5e-070
TAIR9_protein||ATMG01120.1 | Symbols: NAD1B, NAD1 | Encodes subu...    190   3e-047
TAIR9_protein||ATMG00516.1 | Symbols: NAD1C, NAD1 | Encodes subu...    190   3e-047
TAIR9_protein||ATMG01275.1 | Symbols: NAD1A, NAD1, ND1 | Encodes...    190   3e-047
TAIR9_protein||ATCG01120.1 | Symbols: RPS15 | encodes a chloropl...    126   7e-028
TAIR9_protein||AT2G07785.1 | Symbols:  | NADH-ubiquinone oxidore...     81   2e-014

>TAIR9_protein||ATCG01130.1 | Symbols: YCF1.2 | hypothetical protein |
        chrC:123884-129244 REVERSE

          Length = 1787

 Score =  2176 bits (5636), Expect = 0.0
 Identities = 1219/1839 (66%), Positives = 1346/1839 (73%), Gaps = 134/1839 (7%)
 Frame = +1

Query:  9214 VMVFQSFILGNLVSLCMKIINSVAVVGLYYGFLTTFSIGPSYLFLLRARVMDEGEEGTEK 9393
             VMVFQSFILGNLVSLCMKIINSV VVGLYYGFLTTFSIGPSYLFLLRARVMDEGEEGTEK
Sbjct:     1 VMVFQSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMDEGEEGTEK 60

Query:  9394 KVSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGST 9573
             KVSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGST
Sbjct:    61 KVSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGST 120

Query:  9574 TRNEMRNLRIQCVFLNNFIFQLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLI 9753
             TRNEMRNLRIQCVFLNN IFQLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLI
Sbjct:   121 TRNEMRNLRIQCVFLNNLIFQLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLI 180

Query:  9754 GHILFMKWVGLVLVWIQQNNSIRSNVLIRSNKYKFLVSELRNSMTRIFSIILFITCVYYL 9933
             GHILFMKWVGLVLVWIQQNNSIRSNV+IRSNKYKFLVSELRNSM RIFSI+LFITCVYYL
Sbjct:   181 GHILFMKWVGLVLVWIQQNNSIRSNVVIRSNKYKFLVSELRNSMARIFSILLFITCVYYL 240

Query:  9934 GRIPSPIFTKKLKGTSETGGTKQDQEVSTEEAPFPSLFSEEREDLDKIDEMEEIGVNGKD 10113
             GRIPSPIFTKKLKGTSETGGTKQDQEVSTEEAPFPSLFSEE EDLDKIDEMEEI VNGKD
Sbjct:   241 GRIPSPIFTKKLKGTSETGGTKQDQEVSTEEAPFPSLFSEEGEDLDKIDEMEEIRVNGKD 300

Query: 10114 KINKDDEFHVRTYYNYKTVSENRDGNKENSNLEFFKIKKKRGSFFMV*KTFCNSSFRL*K 10293
             KINKDDEFHVRTYYNYKTVSEN  GNKENSNLEFFKIKKK   F    K F    F   +
Sbjct:   301 KINKDDEFHVRTYYNYKTVSENLYGNKENSNLEFFKIKKKEDHFLWFEKPFVTLVFDYKR 360

Query: 10294 ME*TKSIYKK**N*KYCKK*NVTIFFLYMPK*WKRTNIFYISPQPFNVF*NDTKKDPFIY 10473
                     K        +      FF       K    F   P     F    K+ P   
Sbjct:   361 WNRPNRYIKNDKIENIVRNEMSQYFFYTCQSDGKERISFTYPPNLSTFFEMIQKRIPSFT 420

Query: 10474 NRKNTLG--SSLYLLEFGQ*RK--KGKFKKRIFK*N*SFR*EMVC*KYTGKNDSILS*RN 10641
               K T    S+ + L   + R+  K +F  RI   +  +  E +  K T           
Sbjct:   421 KEKKTFDQVSTYWSLIHEEKRENLKKEFLNRIEALDKEWSVENILEKTTR-----FCYNE 475

Query: 10642 SKRIFT*NL*PIFTWDLARKNQK------IISVPNHNQNL*KKEYKRI--LDKQNSWYTS 10797
             +K+ +   +   F   ++R   K      II+      NL      +I  L  + ++   
Sbjct:   476 AKKEYLPKIYDPFLHGISRGRIKKLPPFQIITETYRKNNLGGSWINKIHGLLLKINYKKF 535

Query: 10798 ED*FSKI*TNNRKI*KKIF----------INRE---KTF-FFFRTPRRKNSVRRRNKNFQ 10935
             E    K    +  I KK+           IN E   KTF F F   R  ++ +   KNF 
Sbjct:   536 EQTIEKFNRKSLSIEKKLSFFSEPQQEEKINSEEEIKTFKFLFDIVRTDSNDQTLIKNFM 595

Query: 10936 NFI*CRYNL***SNSYKKFY*FHGNQ*TSSSMVIQINK*IGSGGRRN*RKYTNRAWNSFK 11115
             +F              KK   +      S  ++ ++ +  G     N            +
Sbjct:   596 DF----------PEINKKVPRW------SYKLISELEELEG----ENEENVPMEPGIRSR 635

Query: 11116 KSKTCSGFY*FKRTA*RDLY*SQR*SKF*STR*NDFDSLFRTI*FSSRHN*R-------I 11274
             K+K    F    +    ++Y + + ++  ++  ND  +L R   +S + + R       +
Sbjct:   636 KAKRVVVF--TDKEPHGEIYTNLKDNQ--NSDQNDEMALIR---YSQQSDFRREIIKGSM 688

Query: 11275 HAFPRRKLLLGFLQAKAHSPLFLIE*INFFFFRL-IYGG*KKILRNFMWKKKIIIYKNEE 11451
              +  R+ ++  F QAK HSPLF       FFF   I+G  KKI++NF+WKKK  I K EE
Sbjct:   689 RSQRRKTVIWEFFQAKVHSPLFFDRIDKLFFFSFDIWGLKKKIIKNFIWKKK--IDKKEE 746

Query: 11452 EQSKKDEQRRLEIAETWDSFLFAQIIRGFILITQSILRKYIILPLLIIIKNSIRIILFQL 11631
             EQSK++E RR+EIAETWDSFLFAQIIRG +L+TQSILRKYIILPLLIIIKNS+R++LFQ 
Sbjct:   747 EQSKREETRRIEIAETWDSFLFAQIIRGSLLVTQSILRKYIILPLLIIIKNSVRMLLFQF 806

Query: 11632 PEWEEDFKDWKREMHVKCTYNGVQLSETEFPRNWLTDGIQIKIIFPFYLKPWHKYKFQSS 11811
             PEW +D KDWKREMHVKCTYNGVQLSETEFPRNWLTDGIQIKI+FPFYLKPWHK KFQ+S
Sbjct:   807 PEWSQDLKDWKREMHVKCTYNGVQLSETEFPRNWLTDGIQIKILFPFYLKPWHKSKFQAS 866

Query: 11812 QKARLKKT--KGEKIYFRFLTVWGLETDLPFGSTKPKPSFFKPIFKELKKRIKKSKTKSF 11985
             QKARLKKT  KGEK  F FLTVWG+ET+LPFGS + KPSFF+PI KELKKRIKK K KSF
Sbjct:   867 QKARLKKTKDKGEKNDFCFLTVWGMETELPFGSAQRKPSFFEPISKELKKRIKKLKKKSF 926

Query: 11986 PVLRIFKERATIFLKVEKEIKNWIIKNLLFLKEKKKNLSKQNRISLVGPRAIYELNETKK 12165
              VL+IFKERA IFLKV KE KNWI+KN +F+    K +SK+N I L GPR IYELNE KK
Sbjct:   927 VVLKIFKERAPIFLKVAKETKNWILKNFIFI----KGISKRNLIPLFGPREIYELNEPKK 982

Query: 12166 DLIMSNQMIHELSVQKKSTEWPNSSLSENKIKNVIDKIKTIRNQTKKISKEKEKLTNSCN 12345
             D I+SNQMIHELSVQ KS EW NSSLSE KIKN+ID+ KTIRNQ ++ISKEK+ LTNSC 
Sbjct:   983 DSIISNQMIHELSVQNKSLEWTNSSLSEKKIKNLIDRKKTIRNQIEEISKEKQNLTNSCT 1042

Query: 12346 KLGYDSKIIESSKKSWQTLKKKYS--INS*ICFF---------------YKILR*TTVYN 12474
             KL YDSKIIESSKK WQT K+K +  I   I FF                 I R TT   
Sbjct:  1043 KLRYDSKIIESSKKIWQTFKRKNTRLIRKSIFFFKFCIEQMSIAIFLGIINIPRITTQLF 1102

Query: 12475 YFSRYR*YSKNYYTTFC*FNKKNS*SIYLQE*GKWRKKKNTIYFISTIKNFISKKNFFSY 12654
             + S  +   K  Y      N++N             KKKNT+YFISTIKN IS K   SY
Sbjct:  1103 FESTKKILDKYIYK-----NEENG-----------EKKKNTLYFISTIKNLISNKKKMSY 1146

Query: 12655 DLYSLSQAYVFYKLSQIQVSNFSKLKSFFEYNIYITSFFVKNQIKDFFQEQGIFHYEWKD 12834
             DL SLSQAYVFYKLSQI+VSNF KLK+  EYNI ITSFFVKN+IK FFQE GIFHYE K+
Sbjct:  1147 DLCSLSQAYVFYKLSQIKVSNFCKLKAVLEYNICITSFFVKNKIKVFFQEHGIFHYELKN 1206

Query: 12835 KTFLNSEINQWKNWLRSHSQYNLPQIAWARLVTQKWKNKINQDSLVLNPSLNKVDSYEKN 13014
             KTFLNSE+NQWKNWLRS  QYNLPQI+WARLVTQ WKNKIN+DSLVLNPSL K DSYEK 
Sbjct:  1207 KTFLNSEVNQWKNWLRSQYQYNLPQISWARLVTQNWKNKINKDSLVLNPSLTKEDSYEKK 1266

Query: 13015 FFDNYKKQNFCEANSFFNPKHKQNFKKDSIYNLFCYKSIHSTEKFFDMSTG--LENLLVS 13188
              FDNYKKQ F EA+S  NPKH  N KKDSIYNLFCYKSIHSTEK FDMS G  L+N LVS
Sbjct:  1267 KFDNYKKQKFFEADSLLNPKH--NVKKDSIYNLFCYKSIHSTEKNFDMSIGIALDNCLVS 1324

Query: 13189 CFLEKYNIRSIGEIRHRKYLDSRILNFWFRKKVNIEP--DTKSKKKYIKTKVQNYQRIDK 13362
              FLEKYNIR +GEIRHRKYLD RILNFWF KKV IEP  DTKSKKKYI TKVQNYQ+IDK
Sbjct:  1325 SFLEKYNIRGMGEIRHRKYLDWRILNFWFTKKVTIEPWVDTKSKKKYINTKVQNYQKIDK 1384

Query: 13363 ITKTSLANQKINFFDWMGMNEEILNHRITNFDFFFFPEFFLFSSTYKMKPWVIPIKLLLF 13542
             IT+T LAN+K NFFDWMGMNEEILN RITNF+FFFFPEFFLFSSTYKMKPWVIPIKLLL 
Sbjct:  1385 ITQTDLANKKRNFFDWMGMNEEILNQRITNFEFFFFPEFFLFSSTYKMKPWVIPIKLLLL 1444

Query: 13543 NFNETKNVNKQITLKKKGFISSNENKFLRLFNLNKEENESAGQEEFESDKETKINMESAL 13722
             NFNE  NVNK+I  KKKGFI SNE + LR +NLNKEE ESAGQ E ESDKETK N E+A 
Sbjct:  1445 NFNENINVNKKIIRKKKGFIPSNEKESLRFYNLNKEEKESAGQVELESDKETKRNPEAAR 1504

Query: 13723 SKQEKNIEENYTESKIKKSQNKKQPKSNTDEELDLFLKRYSRFQFRWNC-FNQKIINNIR 13899
               QEKNIEEN+ ES IKK +NKKQ KSNT+ ELDLFL RYSRFQ RWNC FNQKI+NN++
Sbjct:  1505 LNQEKNIEENFAESTIKKRKNKKQYKSNTEAELDLFLTRYSRFQLRWNCFFNQKILNNVK 1564

Query: 13900 VYCLLIRLKNPNEITISCIERGEMSLDILMIEKNCTFSKLMKKGILIVEPVRLSVKNDGQ 14079
             VYCLL+RL NPNEI +S IERGEMSLDILMIEKN TF+KLMKKGILI+EPVRLSV+NDGQ
Sbjct:  1565 VYCLLVRLNNPNEIAVSSIERGEMSLDILMIEKNFTFAKLMKKGILIIEPVRLSVQNDGQ 1624

Query: 14080 LIIYRTIGISLVHKNKQKISKRSKKKSYI------------------YKKNNYDFFVPET 14205
             LIIYRTIGISLVHKNK KISKR KKKSYI                   KKNNYDFFVPE 
Sbjct:  1625 LIIYRTIGISLVHKNKHKISKRYKKKSYINKKFFEKSITKYQNKTVNKKKNNYDFFVPEK 1684

Query: 14206 ILSPKRRKEFRILICFNLKKKNARDRNSKFDTNIQNLTTVLNKKK--DLDKDKKNLIKLK 14379
             ILSPKRR+EFRILICFNLKKKNARD NS+FD NIQNLTTVL+KKK  DLDKDK NLI LK
Sbjct:  1685 ILSPKRRREFRILICFNLKKKNARDTNSRFDKNIQNLTTVLHKKKDLDLDKDKNNLINLK 1744

Query: 14380 SFLWPNFRLEDLACMNRYWFNTTNGNHFSMIRIHMYTRF 14496
             SFLWPNF+LEDLACMNRYWFNTTNGNHFSMIRI MYTRF
Sbjct:  1745 SFLWPNFKLEDLACMNRYWFNTTNGNHFSMIRIRMYTRF 1783


 Score =  630 bits (1623), Expect = 1e-179
 Identities = 322/424 (75%), Positives = 357/424 (84%), Gaps = 4/424 (0%)
 Frame = +2

Query: 10214 FSK*KKKEDHFLWFEKPFVTLVFDYKRWNRPNRYIKNDKIENTVRNEMSQYFFYTCQSDG 10393
             F K KKKEDHFLWFEKPFVTLVFDYKRWNRPNRYIKNDKIEN VRNEMSQYFFYTCQSDG
Sbjct:   334 FFKIKKKEDHFLWFEKPFVTLVFDYKRWNRPNRYIKNDKIENIVRNEMSQYFFYTCQSDG 393

Query: 10394 KERISFTYPPNLSTFFEMIQKKIPSFTTEKTPSDQVYTCWSLVNEEKKENLKNEFLNRIE 10573
             KERISFTYPPNLSTFFEMIQK+IPSFT EK   DQV T WSL++EEK+ENLK EFLNRIE
Sbjct:   394 KERISFTYPPNLSTFFEMIQKRIPSFTKEKKTFDQVSTYWSLIHEEKRENLKKEFLNRIE 453

Query: 10574 ALDKKWSVENILEKTTRFCHNETQKEYLPKIYDPFLHGISRGRIKKLSPFQIITKTYKKK 10753
             ALDK+WSVENILEKTTRFC+NE +KEYLPKIYDPFLHGISRGRIKKL PFQIIT+TY+K 
Sbjct:   454 ALDKEWSVENILEKTTRFCYNEAKKEYLPKIYDPFLHGISRGRIKKLPPFQIITETYRKN 513

Query: 10754 NIRGSWINKIHGILLKINSQKFEQTIEKFKRKSLSIEKKLSFFSEP-QEEKIQSEEEIKI 10930
             N+ GSWINKIHG+LLKIN +KFEQTIEKF RKSLSIEKKLSFFSEP QEEKI SEEEIK 
Sbjct:   514 NLGGSWINKIHGLLLKINYKKFEQTIEKFNRKSLSIEKKLSFFSEPQQEEKINSEEEIKT 573

Query: 10931 FKILFDVVIIYNNDQTLIKNFIDFMEINKQVPQWSYKLTSELEAVEGETEENIPTEPGIR 11110
             FK LFD+V   +NDQTLIKNF+DF EINK+VP+WSYKL SELE +EGE EEN+P EPGIR
Sbjct:   574 FKFLFDIVRTDSNDQTLIKNFMDFPEINKKVPRWSYKLISELEELEGENEENVPMEPGIR 633

Query: 11111 SRKAKLVVVFTDLKEPHNEIYTNLKDNQNSDQPDEMTLIRYSEQSDFRRDIIKGSMRSQ- 11287
             SRKAK VVVFTD KEPH EIYTNLKDNQNSDQ DEM LIRYS+QSDFRR+IIKGSMRSQ 
Sbjct:   634 SRKAKRVVVFTD-KEPHGEIYTNLKDNQNSDQNDEMALIRYSQQSDFRREIIKGSMRSQR 692

Query: 11288 GVNCYWDFCKPK-HIRPFF**NR*IFFFFV*YMGAKKKFLEISCGKKKLLFIKTKKNNQK 11464
                  W+F + K H   FF     +FFF     G KKK ++    KKK+   + +++ ++
Sbjct:   693 RKTVIWEFFQAKVHSPLFFDRIDKLFFFSFDIWGLKKKIIKNFIWKKKIDKKEEEQSKRE 752

Query: 11465 KTNK 11476
             +T +
Sbjct:   753 ETRR 756


 Score =  122 bits (304), Expect = 1e-026
 Identities = 82/186 (44%), Positives = 106/186 (56%), Gaps = 9/186 (4%)
 Frame = +2

Query: 12302 KKFQKKKKN*LIVVTNWVMTLK*LSHQKKVGRH*K-KNTRLIRKSVFFIKFCVEQLSITI 12478
             ++  K+K+N     T      K +   KK+ +  K KNTRLIRKS+FF KFC+EQ+SI I
Sbjct:  1028 EEISKEKQNLTNSCTKLRYDSKIIESSKKIWQTFKRKNTRLIRKSIFFFKFCIEQMSIAI 1087

Query: 12479 FLGIVNIPRITTQLFVDSTKKILDRYIYKNEENGEKKK--IPFILFRL*KISYQKKIFLV 12652
             FLGI+NIPRITTQLF +STKKILD+YIYKNEENGEKKK  + FI      IS +KK    
Sbjct:  1088 FLGIINIPRITTQLFFESTKKILDKYIYKNEENGEKKKNTLYFISTIKNLISNKKK---- 1143

Query: 12653 MTYTLYHKHMYFTNY--HKFKLVTFLN*SLFLNITYT*HPFLLRIK*RIFFKNKESFIMN 12826
             M+Y L      +  Y   + K+  F      L        F ++ K ++FF+    F   
Sbjct:  1144 MSYDLCSLSQAYVFYKLSQIKVSNFCKLKAVLEYNICITSFFVKNKIKVFFQEHGIFHYE 1203

Query: 12827 GKIKPF 12844
              K K F
Sbjct:  1204 LKNKTF 1209

>TAIR9_protein||ATCG01110.1 | Symbols: NDHH | Encodes the 49KDa plastid NAD(P)H
        dehydrogenase subunit H protein.  Its transcription is regulated by an
        ndhF-specific plastid sigma factor, SIG4. | chrC:122011-123192 REVERSE

          Length = 394

 Score =  803 bits (2072), Expect = 1e-231
 Identities = 388/394 (98%), Positives = 392/394 (99%)
 Frame = +1

Query: 15250 MKKPVTGKDLMIVNMGPHHPSMHGVLRLIVTLDGEDVVDCEPILGYLHRGMEKIAENRAI 15429
             MK+PVTGKDLMIVNMGPHHPSMHGVLRLIVTLDGEDVVDCEPILGYLHRGMEKIAENRAI
Sbjct:     1 MKRPVTGKDLMIVNMGPHHPSMHGVLRLIVTLDGEDVVDCEPILGYLHRGMEKIAENRAI 60

Query: 15430 IQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGP 15609
             IQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGP
Sbjct:    61 IQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGP 120

Query: 15610 FMADIGAQTPFFYIFREREFVYDLFEAATGMRMMHNFFRIGGIAADLPYGWVDKCLDFCD 15789
             FMADIGAQTPFFYIFREREFVYDLFEAATGMRMMHNFFRIGGIAADLPYGW+DKCLDFCD
Sbjct:   121 FMADIGAQTPFFYIFREREFVYDLFEAATGMRMMHNFFRIGGIAADLPYGWIDKCLDFCD 180

Query: 15790 YFLTEVVEYQKLITRNPIFLERVEGVGIIGGEEAINWGLSGPMLRASGIPWDLRKVDRYE 15969
             YFLTEVVEYQKLITRNPIFLERVEGVGIIGGEEAINWGLSGPMLRASGIPWDLRK+DRYE
Sbjct:   181 YFLTEVVEYQKLITRNPIFLERVEGVGIIGGEEAINWGLSGPMLRASGIPWDLRKIDRYE 240

Query: 15970 SYDEFEWEIQWQKQGDSLARYLVRLSEMTESIKIIQQALEGLPGGPYENLESRGFDKKRN 16149
             SYDEFEWEIQWQKQGDSLARYLVRLSEMTESIKIIQQALEGLPGGPYENLESRGFD+KRN
Sbjct:   241 SYDEFEWEIQWQKQGDSLARYLVRLSEMTESIKIIQQALEGLPGGPYENLESRGFDRKRN 300

Query: 16150 PEWNDFEYRFISKKPSPTFELSKQELYVRVEAPKGELGIFLIGDQSGFPWRWKIRPPGFI 16329
             PEWNDFEYRFISKKPSPTFELSKQELYVRVEAPKGELGIFLIGDQSGFPWRWKIRPPGFI
Sbjct:   301 PEWNDFEYRFISKKPSPTFELSKQELYVRVEAPKGELGIFLIGDQSGFPWRWKIRPPGFI 360

Query: 16330 NLQILP*LVKRMKLADIMTILGSIDIIMGEVDR* 16431
             NLQILP LVKRMKLADIMTILGSIDIIMGEVDR*
Sbjct:   361 NLQILPELVKRMKLADIMTILGSIDIIMGEVDR* 394

>TAIR9_protein||ATCG01100.1 | Symbols: NDHA | NADH dehydrogenase ND1 |
        chrC:119847-122009 REVERSE

          Length = 361

 Score =  695 bits (1792), Expect = 4e-199
 Identities = 352/361 (97%), Positives = 359/361 (99%)
 Frame = +2

Query: 16433 MIIYATEVQTINSFVRLESLKEVYGLIWIFVPIFSLVLGIITGVLVIVWLEREISAGIQQ 16612
             MIIYAT VQTINSFV+LESLKEVYGLIWIFVPIFSLVLGIITGVLVIVWLEREISAGIQQ
Sbjct:     1 MIIYATAVQTINSFVKLESLKEVYGLIWIFVPIFSLVLGIITGVLVIVWLEREISAGIQQ 60

Query: 16613 RIGPEYAGPLGILQALADGTKLLFKEDLRPSRGNTPLFSIGPSIAVISILLSYSVIPFSN 16792
             RIGPEYAGPLGILQALADGTKLLFKE+LRPSRGNTPLFSIGPSIAVISILLSYSVIPFSN
Sbjct:    61 RIGPEYAGPLGILQALADGTKLLFKENLRPSRGNTPLFSIGPSIAVISILLSYSVIPFSN 120

Query: 16793 HLVLADLNIGIFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQAISYEIPLTLCVL 16972
             HLVLADLNIGIFLWIAISS+APIGLLMSGYGSNNKYSFLGGLRAAAQ+ISYEIPLTLCVL
Sbjct:   121 HLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 16973 SISLLSNSLSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAECERLPFDLPEAEEEL 17152
             SISLLSNSLSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAECERLPFDLPEAEEEL
Sbjct:   181 SISLLSNSLSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAECERLPFDLPEAEEEL 240

Query: 17153 IAGYQTEYSGIKFGLFYVASYLNLLISSLFVTVLYLGGWNISIPYISILELFEKDQIFGT 17332
             IAGYQTEYSGIKFGLFYVASYLNLLISSLFVTVLYLGGWNISIPYISILELF++DQIFGT
Sbjct:   241 IAGYQTEYSGIKFGLFYVASYLNLLISSLFVTVLYLGGWNISIPYISILELFQRDQIFGT 300

Query: 17333 TIGIFITLAKTYLFLFISIATRWTLPRLRMDQLLNLGWKFLLPISLGNLLLTTSFQLFSL 17512
             TIGIFITLAKTYLFLF+SIATRWTLPRLRMDQLLNLGWKFLLPISLGNLLLTTSFQLFSL
Sbjct:   301 TIGIFITLAKTYLFLFVSIATRWTLPRLRMDQLLNLGWKFLLPISLGNLLLTTSFQLFSL 360

Query: 17513 * 17515
             *
Sbjct:   361 * 361

>TAIR9_protein||ATCG01000.1 | Symbols: YCF1.1 | hypothetical protein |
        chrC:109405-110436 FORWARD

          Length = 344

 Score =  668 bits (1723), Expect = 4e-191
 Identities = 331/340 (97%), Positives = 333/340 (97%)
 Frame = +1

Query:  9214 VMVFQSFILGNLVSLCMKIINSVAVVGLYYGFLTTFSIGPSYLFLLRARVMDEGEEGTEK 9393
             VMVFQSFILGNLVSLCMKIINSV VVGLYYGFLTTFSIGPSYLFLLRARVMDEGEEGTEK
Sbjct:     1 VMVFQSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMDEGEEGTEK 60

Query:  9394 KVSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGST 9573
             KVSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGST
Sbjct:    61 KVSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGST 120

Query:  9574 TRNEMRNLRIQCVFLNNFIFQLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLI 9753
             TRNEMRNLRIQCVFLNN IFQLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLI
Sbjct:   121 TRNEMRNLRIQCVFLNNLIFQLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLI 180

Query:  9754 GHILFMKWVGLVLVWIQQNNSIRSNVLIRSNKYKFLVSELRNSMTRIFSIILFITCVYYL 9933
             GHILFMKWVGLVLVWIQQNNSIRSNV+IRSNKYKFLVSELRNSM RIFSI+LFITCVYYL
Sbjct:   181 GHILFMKWVGLVLVWIQQNNSIRSNVVIRSNKYKFLVSELRNSMARIFSILLFITCVYYL 240

Query:  9934 GRIPSPIFTKKLKGTSETGGTKQDQEVSTEEAPFPSLFSEEREDLDKIDEMEEIGVNGKD 10113
             GRIPSPIFTKKLKGTSETGGTKQDQEVSTEEAPFPSLFSEE EDLDKIDEMEEI VNGKD
Sbjct:   241 GRIPSPIFTKKLKGTSETGGTKQDQEVSTEEAPFPSLFSEEGEDLDKIDEMEEIRVNGKD 300

Query: 10114 KINKDDEFHVRTYYNYKTVSENRDGNKENSNLEFFKIKKK 10233
             KINKDDEFHVRTYYNYKTVSEN  GNKENSNLEFFKIKKK
Sbjct:   301 KINKDDEFHVRTYYNYKTVSENLYGNKENSNLEFFKIKKK 340

>TAIR9_protein||ATMG00370.1 | Symbols: ORF199 | hypothetical protein |
        chrM:104954-105553 REVERSE

          Length = 200

 Score =  340 bits (871), Expect = 2e-092
 Identities = 171/188 (90%), Positives = 176/188 (93%), Gaps = 3/188 (1%)
 Frame = +1

Query: 9217 MVFQSFILGNLVSLCMKIINSVAVVGLYYGFLTTFSIGPSYLFLLRARVMDEGEEGTEKK 9396
            MVFQSFILGNLV LCMKIINSV VVGLYYGFLTTFSIGPSYLFLLRARVMDEGEEGTEKK
Sbjct:    1 MVFQSFILGNLVYLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMDEGEEGTEKK 60

Query: 9397 VSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFH-FFWNNHKHFFDYGST 9573
            VSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFH FFWNNHKHFFDYGST
Sbjct:   61 VSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFFWNNHKHFFDYGST 120

Query: 9574 TRNEMRNLRIQCVFLNNFIFQLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLI 9753
            TRNEMRNLRIQCVF NN IF+LFNH ILPSSMLARLVNIYMFRCNNKMLFVTSSFV  + 
Sbjct:  121 TRNEMRNLRIQCVFPNNLIFKLFNHLILPSSMLARLVNIYMFRCNNKMLFVTSSFV--VC 178

Query: 9754 GHILFMKW 9777
              +L ++W
Sbjct:  179 VRMLLVEW 186

>TAIR9_protein||AT2G07739.1 | Symbols:  | FUNCTIONS IN: molecular_function
        unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
        endomembrane system; CONTAINS InterPro DOMAIN/s: Ycf1
        (InterPro:IPR008896); BEST Arabidopsis thaliana protein match is:
        unknown protein (TAIR:ATMG00370.1); Has 357 Blast hits to 357 proteins
        in 115 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
        Plants - 357; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
        chr2:3495511-3496110 REVERSE

          Length = 200

 Score =  338 bits (865), Expect = 1e-091
 Identities = 170/188 (90%), Positives = 175/188 (93%), Gaps = 3/188 (1%)
 Frame = +1

Query: 9217 MVFQSFILGNLVSLCMKIINSVAVVGLYYGFLTTFSIGPSYLFLLRARVMDEGEEGTEKK 9396
            MVFQSFILGNLV LCMKIINSV VVGLYYGFLTTFSIGP YLFLLRARVMDEGEEGTEKK
Sbjct:    1 MVFQSFILGNLVYLCMKIINSVVVVGLYYGFLTTFSIGPFYLFLLRARVMDEGEEGTEKK 60

Query: 9397 VSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFH-FFWNNHKHFFDYGST 9573
            VSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFH FFWNNHKHFFDYGST
Sbjct:   61 VSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFFWNNHKHFFDYGST 120

Query: 9574 TRNEMRNLRIQCVFLNNFIFQLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLI 9753
            TRNEMRNLRIQCVF NN IF+LFNH ILPSSMLARLVNIYMFRCNNKMLFVTSSFV  + 
Sbjct:  121 TRNEMRNLRIQCVFPNNLIFKLFNHLILPSSMLARLVNIYMFRCNNKMLFVTSSFV--VC 178

Query: 9754 GHILFMKW 9777
              +L ++W
Sbjct:  179 VRMLLVEW 186

>TAIR9_protein||ATMG00510.1 | Symbols: NAD7 | NADH dehydrogenase subunit 7 |
        chrM:132071-138153 FORWARD

          Length = 395

 Score =  266 bits (678), Expect = 5e-070
 Identities = 148/388 (38%), Positives = 220/388 (56%), Gaps = 13/388 (3%)
 Frame = +1

Query: 15289 NMGPHHPSMHGVLRLIVTLDGEDVVDCEPILGYLHRGMEKIAENRAIIQYLPYVTRWDYL 15468
             N GP HP+ HGV RL++ ++GE V   EP +G LHRG EK+ E +  +Q LPY  R DY+
Sbjct:    14 NFGPQHPAAHGVSRLVLEMNGEVVERAEPHIGSLHRGTEKLIEYKTYLQALPYSDRSDYV 73

Query: 15469 ATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFY 15648
             + M  E    +  E+L N +VP RA YIRV+  E++RI++H L L     D+GA TPF +
Sbjct:    74 SMMAQEHAHSSAVEKLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGALTPFLW 133

Query: 15649 IFREREFVYDLFEAATGMRMMHNFFRIGGIAADLPYGWVDKCLDFCDYFLTEVVEYQKLI 15828
              F ERE + + +E  +G RM  +F R GG+A DLP G       F   F + + E +++ 
Sbjct:   134 AFEEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEMS 193

Query: 15829 TRNPIFLERVEGVGIIGGEEAINWGLSGPMLRASGIPWDLRKVDRYESYDEFEWEIQWQK 16008
             T N I+ +R+  +G +  ++A +WG SG MLR  G+ WD R+   Y+ +D+ + ++    
Sbjct:   194 TGNRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGPGVCWDSRRAAPYDVHDQSDLDVPVGT 253

Query: 16009 QGDSLARYLVRLSEMTESIKIIQQALEGLPGGPYENLESRGFDKKRNPEWNDFEYRFISK 16188
             +GD   RY +R+ EM +S++II Q L  +P G       +  D+K  P  +    +   +
Sbjct:   254 RGDRYDRYCIRIEEMRQSLRIIVQCLNQMPSGMI-----KADDRKLCPP-SRCRMKLSME 307

Query: 16189 KPSPTFELSKQ-------ELYVRVEAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILP 16347
                  FEL  +         Y  VEAPKGE G+FL+ + S  P+R KIR PG  + Q L 
Sbjct:   308 SSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLD 367

Query: 16348 *LVKRMKLADIMTILGSIDIIMGEVDR* 16431
              + K    AD++TI+G+ DI+ GEVDR*
Sbjct:   368 SMSKHHMPADVVTIIGTQDIVFGEVDR* 395

>TAIR9_protein||ATMG01120.1 | Symbols: NAD1B, NAD1 | Encodes subunit of
        mitochondrial NAD(P)H dehydrogenase that is trans-spliced from three
        precursors, NAD1A, NAD1B, and NAD1C. | chrM:287917-289083 REVERSE

          Length = 326

 Score =  190 bits (482), Expect = 3e-047
 Identities = 103/254 (40%), Positives = 160/254 (62%), Gaps = 6/254 (2%)
 Frame = +2

Query: 16514 WIFVP--IFSLVLGIITGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFK 16687
             +I VP  I  ++L ++ GV  +V  ER++ A +Q+R GP+  G  G+LQ LADG+KL+ K
Sbjct:     2 YIAVPAEILGIILPLLLGVAFLVLAERKVMAFVQRRKGPDVVGSFGLLQPLADGSKLILK 61

Query: 16688 EDLRPSRGNTPLFSIGPSIAVISILLSYSVIPFSNHLVLADLNIGIFLWIAISSVAPIGL 16867
             E + PS  N  LF + P    +  L++ +V+PF   +VL+D NIG+    AISS+   G+
Sbjct:    62 EPISPSSANFFLFRMAPVATFMLSLVARAVVPFDYGMVLSDPNIGLLYLFAISSLGVYGI 121

Query: 16868 LMSGYGSNNKYSFLGGLRAAAQAISYEIPLTLCVLSISLLSNSLSTVDIVEAQSKYGFWG 17047
             +++G  SN+KY+FLG LR+AAQ +SYE+ + L ++++ +     ++ +IV AQ +   W 
Sbjct:   122 IIAGRSSNSKYAFLGALRSAAQMVSYEVSIGLILITVLICVGPRNSSEIVMAQKQ--IWS 179

Query: 17048 WNLWRQPIGFIIFLISSLAECERLPFDLPEAEEELIAGYQTEYSGIKFGLFYVASYLNLL 17227
               +   P+  ++FLIS LAE  R PFDLPEAE E +AGY  EYS +   LF++  Y N++
Sbjct:   180 -GIPLFPV-LVMFLISRLAETNRAPFDLPEAEAESVAGYNVEYSSMGSALFFLGEYANMI 237

Query: 17228 ISSLFVTVLYLGGW 17269
             + S   T+ + GGW
Sbjct:   238 LMSGPCTLFFPGGW 251

>TAIR9_protein||ATMG00516.1 | Symbols: NAD1C, NAD1 | Encodes subunit of
        mitochondrial NAD(P)H dehydrogenase that is trans-spliced from three
        precursors, NAD1A, NAD1B, and NAD1C. | chrM:143219-147048 REVERSE

          Length = 326

 Score =  190 bits (482), Expect = 3e-047
 Identities = 103/254 (40%), Positives = 160/254 (62%), Gaps = 6/254 (2%)
 Frame = +2

Query: 16514 WIFVP--IFSLVLGIITGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFK 16687
             +I VP  I  ++L ++ GV  +V  ER++ A +Q+R GP+  G  G+LQ LADG+KL+ K
Sbjct:     2 YIAVPAEILGIILPLLLGVAFLVLAERKVMAFVQRRKGPDVVGSFGLLQPLADGSKLILK 61

Query: 16688 EDLRPSRGNTPLFSIGPSIAVISILLSYSVIPFSNHLVLADLNIGIFLWIAISSVAPIGL 16867
             E + PS  N  LF + P    +  L++ +V+PF   +VL+D NIG+    AISS+   G+
Sbjct:    62 EPISPSSANFFLFRMAPVATFMLSLVARAVVPFDYGMVLSDPNIGLLYLFAISSLGVYGI 121

Query: 16868 LMSGYGSNNKYSFLGGLRAAAQAISYEIPLTLCVLSISLLSNSLSTVDIVEAQSKYGFWG 17047
             +++G  SN+KY+FLG LR+AAQ +SYE+ + L ++++ +     ++ +IV AQ +   W 
Sbjct:   122 IIAGRSSNSKYAFLGALRSAAQMVSYEVSIGLILITVLICVGPRNSSEIVMAQKQ--IWS 179

Query: 17048 WNLWRQPIGFIIFLISSLAECERLPFDLPEAEEELIAGYQTEYSGIKFGLFYVASYLNLL 17227
               +   P+  ++FLIS LAE  R PFDLPEAE E +AGY  EYS +   LF++  Y N++
Sbjct:   180 -GIPLFPV-LVMFLISRLAETNRAPFDLPEAEAESVAGYNVEYSSMGSALFFLGEYANMI 237

Query: 17228 ISSLFVTVLYLGGW 17269
             + S   T+ + GGW
Sbjct:   238 LMSGPCTLFFPGGW 251

>TAIR9_protein||ATMG01275.1 | Symbols: NAD1A, NAD1, ND1 | Encodes subunit of
        mitochondrial NAD(P)H dehydrogenase that is trans-spliced from three
        precursors, NAD1A, NAD1B, and NAD1C. | chrM:318004-318390 REVERSE

          Length = 326

 Score =  190 bits (482), Expect = 3e-047
 Identities = 103/254 (40%), Positives = 160/254 (62%), Gaps = 6/254 (2%)
 Frame = +2

Query: 16514 WIFVP--IFSLVLGIITGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFK 16687
             +I VP  I  ++L ++ GV  +V  ER++ A +Q+R GP+  G  G+LQ LADG+KL+ K
Sbjct:     2 YIAVPAEILGIILPLLLGVAFLVLAERKVMAFVQRRKGPDVVGSFGLLQPLADGSKLILK 61

Query: 16688 EDLRPSRGNTPLFSIGPSIAVISILLSYSVIPFSNHLVLADLNIGIFLWIAISSVAPIGL 16867
             E + PS  N  LF + P    +  L++ +V+PF   +VL+D NIG+    AISS+   G+
Sbjct:    62 EPISPSSANFFLFRMAPVATFMLSLVARAVVPFDYGMVLSDPNIGLLYLFAISSLGVYGI 121

Query: 16868 LMSGYGSNNKYSFLGGLRAAAQAISYEIPLTLCVLSISLLSNSLSTVDIVEAQSKYGFWG 17047
             +++G  SN+KY+FLG LR+AAQ +SYE+ + L ++++ +     ++ +IV AQ +   W 
Sbjct:   122 IIAGRSSNSKYAFLGALRSAAQMVSYEVSIGLILITVLICVGPRNSSEIVMAQKQ--IWS 179

Query: 17048 WNLWRQPIGFIIFLISSLAECERLPFDLPEAEEELIAGYQTEYSGIKFGLFYVASYLNLL 17227
               +   P+  ++FLIS LAE  R PFDLPEAE E +AGY  EYS +   LF++  Y N++
Sbjct:   180 -GIPLFPV-LVMFLISRLAETNRAPFDLPEAEAESVAGYNVEYSSMGSALFFLGEYANMI 237

Query: 17228 ISSLFVTVLYLGGW 17269
             + S   T+ + GGW
Sbjct:   238 LMSGPCTLFFPGGW 251

>TAIR9_protein||ATCG01120.1 | Symbols: RPS15 | encodes a chloroplast ribosomal
        protein S15, a constituent of the small subunit of the ribosomal
        complex | chrC:123296-123562 REVERSE

          Length = 89

 Score =  126 bits (315), Expect = 7e-028
 Identities = 63/68 (92%), Positives = 66/68 (97%)
 Frame = +1

Query: 14881 MIKNTFISFQEKKEESKGSVEFQVFSFTNKIRRLTSHLELHRKDYLSQRGLRKILGKRQR 15060
             MIKN  ISF+E+KEES+GSVEFQVFSFTNKIRRLTSHLELHRKDYLSQRGLRKILGKRQR
Sbjct:     1 MIKNIVISFEEQKEESRGSVEFQVFSFTNKIRRLTSHLELHRKDYLSQRGLRKILGKRQR 60

Query: 15061 LLAYLSKK 15084
             LLAYLSKK
Sbjct:    61 LLAYLSKK 68

>TAIR9_protein||AT2G07785.1 | Symbols:  | NADH-ubiquinone oxidoreductase,
        putative | chr2:3348114-3348413 FORWARD

          Length = 100

 Score =  81 bits (199), Expect = 2e-014
 Identities = 41/98 (41%), Positives = 62/98 (63%)
 Frame = +2

Query: 16598 AGIQQRIGPEYAGPLGILQALADGTKLLFKEDLRPSRGNTPLFSIGPSIAVISILLSYSV 16777
             A +Q+R GP+  G  G+LQ LADG+KL+ KE + PS  N  LF + P    +  L++ +V
Sbjct:     2 AFVQRRKGPDVVGSFGLLQPLADGSKLILKEPISPSSANFFLFRMAPVATFMLSLVARAV 61

Query: 16778 IPFSNHLVLADLNIGIFLWIAISSVAPIGLLMSGYGSN 16891
             +PF   +VL+D NIG+    AISS+   G++++G  SN
Sbjct:    62 VPFDYGMVLSDPNIGLLYLFAISSLGVYGIIIAGRSSN 99

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,186,182,936
Number of Sequences: 33410
Number of Extensions: 12186182936
Number of Successful Extensions: 391856999
Number of sequences better than 0.0: 0