BLASTX 7.6.2
Query= UN23562 /QuerySize=17829
(17828 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||ATCG01130.1 | Symbols: YCF1.2 | hypothetical prot... 2176 0.0
TAIR9_protein||ATCG01110.1 | Symbols: NDHH | Encodes the 49KDa p... 803 1e-231
TAIR9_protein||ATCG01100.1 | Symbols: NDHA | NADH dehydrogenase ... 695 4e-199
TAIR9_protein||ATCG01000.1 | Symbols: YCF1.1 | hypothetical prot... 668 4e-191
TAIR9_protein||ATMG00370.1 | Symbols: ORF199 | hypothetical prot... 340 2e-092
TAIR9_protein||AT2G07739.1 | Symbols: | FUNCTIONS IN: molecular... 338 1e-091
TAIR9_protein||ATMG00510.1 | Symbols: NAD7 | NADH dehydrogenase ... 266 5e-070
TAIR9_protein||ATMG01120.1 | Symbols: NAD1B, NAD1 | Encodes subu... 190 3e-047
TAIR9_protein||ATMG00516.1 | Symbols: NAD1C, NAD1 | Encodes subu... 190 3e-047
TAIR9_protein||ATMG01275.1 | Symbols: NAD1A, NAD1, ND1 | Encodes... 190 3e-047
TAIR9_protein||ATCG01120.1 | Symbols: RPS15 | encodes a chloropl... 126 7e-028
TAIR9_protein||AT2G07785.1 | Symbols: | NADH-ubiquinone oxidore... 81 2e-014
>TAIR9_protein||ATCG01130.1 | Symbols: YCF1.2 | hypothetical protein |
chrC:123884-129244 REVERSE
Length = 1787
Score = 2176 bits (5636), Expect = 0.0
Identities = 1219/1839 (66%), Positives = 1346/1839 (73%), Gaps = 134/1839 (7%)
Frame = +1
Query: 9214 VMVFQSFILGNLVSLCMKIINSVAVVGLYYGFLTTFSIGPSYLFLLRARVMDEGEEGTEK 9393
VMVFQSFILGNLVSLCMKIINSV VVGLYYGFLTTFSIGPSYLFLLRARVMDEGEEGTEK
Sbjct: 1 VMVFQSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMDEGEEGTEK 60
Query: 9394 KVSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGST 9573
KVSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGST
Sbjct: 61 KVSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGST 120
Query: 9574 TRNEMRNLRIQCVFLNNFIFQLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLI 9753
TRNEMRNLRIQCVFLNN IFQLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLI
Sbjct: 121 TRNEMRNLRIQCVFLNNLIFQLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLI 180
Query: 9754 GHILFMKWVGLVLVWIQQNNSIRSNVLIRSNKYKFLVSELRNSMTRIFSIILFITCVYYL 9933
GHILFMKWVGLVLVWIQQNNSIRSNV+IRSNKYKFLVSELRNSM RIFSI+LFITCVYYL
Sbjct: 181 GHILFMKWVGLVLVWIQQNNSIRSNVVIRSNKYKFLVSELRNSMARIFSILLFITCVYYL 240
Query: 9934 GRIPSPIFTKKLKGTSETGGTKQDQEVSTEEAPFPSLFSEEREDLDKIDEMEEIGVNGKD 10113
GRIPSPIFTKKLKGTSETGGTKQDQEVSTEEAPFPSLFSEE EDLDKIDEMEEI VNGKD
Sbjct: 241 GRIPSPIFTKKLKGTSETGGTKQDQEVSTEEAPFPSLFSEEGEDLDKIDEMEEIRVNGKD 300
Query: 10114 KINKDDEFHVRTYYNYKTVSENRDGNKENSNLEFFKIKKKRGSFFMV*KTFCNSSFRL*K 10293
KINKDDEFHVRTYYNYKTVSEN GNKENSNLEFFKIKKK F K F F +
Sbjct: 301 KINKDDEFHVRTYYNYKTVSENLYGNKENSNLEFFKIKKKEDHFLWFEKPFVTLVFDYKR 360
Query: 10294 ME*TKSIYKK**N*KYCKK*NVTIFFLYMPK*WKRTNIFYISPQPFNVF*NDTKKDPFIY 10473
K + FF K F P F K+ P
Sbjct: 361 WNRPNRYIKNDKIENIVRNEMSQYFFYTCQSDGKERISFTYPPNLSTFFEMIQKRIPSFT 420
Query: 10474 NRKNTLG--SSLYLLEFGQ*RK--KGKFKKRIFK*N*SFR*EMVC*KYTGKNDSILS*RN 10641
K T S+ + L + R+ K +F RI + + E + K T
Sbjct: 421 KEKKTFDQVSTYWSLIHEEKRENLKKEFLNRIEALDKEWSVENILEKTTR-----FCYNE 475
Query: 10642 SKRIFT*NL*PIFTWDLARKNQK------IISVPNHNQNL*KKEYKRI--LDKQNSWYTS 10797
+K+ + + F ++R K II+ NL +I L + ++
Sbjct: 476 AKKEYLPKIYDPFLHGISRGRIKKLPPFQIITETYRKNNLGGSWINKIHGLLLKINYKKF 535
Query: 10798 ED*FSKI*TNNRKI*KKIF----------INRE---KTF-FFFRTPRRKNSVRRRNKNFQ 10935
E K + I KK+ IN E KTF F F R ++ + KNF
Sbjct: 536 EQTIEKFNRKSLSIEKKLSFFSEPQQEEKINSEEEIKTFKFLFDIVRTDSNDQTLIKNFM 595
Query: 10936 NFI*CRYNL***SNSYKKFY*FHGNQ*TSSSMVIQINK*IGSGGRRN*RKYTNRAWNSFK 11115
+F KK + S ++ ++ + G N +
Sbjct: 596 DF----------PEINKKVPRW------SYKLISELEELEG----ENEENVPMEPGIRSR 635
Query: 11116 KSKTCSGFY*FKRTA*RDLY*SQR*SKF*STR*NDFDSLFRTI*FSSRHN*R-------I 11274
K+K F + ++Y + + ++ ++ ND +L R +S + + R +
Sbjct: 636 KAKRVVVF--TDKEPHGEIYTNLKDNQ--NSDQNDEMALIR---YSQQSDFRREIIKGSM 688
Query: 11275 HAFPRRKLLLGFLQAKAHSPLFLIE*INFFFFRL-IYGG*KKILRNFMWKKKIIIYKNEE 11451
+ R+ ++ F QAK HSPLF FFF I+G KKI++NF+WKKK I K EE
Sbjct: 689 RSQRRKTVIWEFFQAKVHSPLFFDRIDKLFFFSFDIWGLKKKIIKNFIWKKK--IDKKEE 746
Query: 11452 EQSKKDEQRRLEIAETWDSFLFAQIIRGFILITQSILRKYIILPLLIIIKNSIRIILFQL 11631
EQSK++E RR+EIAETWDSFLFAQIIRG +L+TQSILRKYIILPLLIIIKNS+R++LFQ
Sbjct: 747 EQSKREETRRIEIAETWDSFLFAQIIRGSLLVTQSILRKYIILPLLIIIKNSVRMLLFQF 806
Query: 11632 PEWEEDFKDWKREMHVKCTYNGVQLSETEFPRNWLTDGIQIKIIFPFYLKPWHKYKFQSS 11811
PEW +D KDWKREMHVKCTYNGVQLSETEFPRNWLTDGIQIKI+FPFYLKPWHK KFQ+S
Sbjct: 807 PEWSQDLKDWKREMHVKCTYNGVQLSETEFPRNWLTDGIQIKILFPFYLKPWHKSKFQAS 866
Query: 11812 QKARLKKT--KGEKIYFRFLTVWGLETDLPFGSTKPKPSFFKPIFKELKKRIKKSKTKSF 11985
QKARLKKT KGEK F FLTVWG+ET+LPFGS + KPSFF+PI KELKKRIKK K KSF
Sbjct: 867 QKARLKKTKDKGEKNDFCFLTVWGMETELPFGSAQRKPSFFEPISKELKKRIKKLKKKSF 926
Query: 11986 PVLRIFKERATIFLKVEKEIKNWIIKNLLFLKEKKKNLSKQNRISLVGPRAIYELNETKK 12165
VL+IFKERA IFLKV KE KNWI+KN +F+ K +SK+N I L GPR IYELNE KK
Sbjct: 927 VVLKIFKERAPIFLKVAKETKNWILKNFIFI----KGISKRNLIPLFGPREIYELNEPKK 982
Query: 12166 DLIMSNQMIHELSVQKKSTEWPNSSLSENKIKNVIDKIKTIRNQTKKISKEKEKLTNSCN 12345
D I+SNQMIHELSVQ KS EW NSSLSE KIKN+ID+ KTIRNQ ++ISKEK+ LTNSC
Sbjct: 983 DSIISNQMIHELSVQNKSLEWTNSSLSEKKIKNLIDRKKTIRNQIEEISKEKQNLTNSCT 1042
Query: 12346 KLGYDSKIIESSKKSWQTLKKKYS--INS*ICFF---------------YKILR*TTVYN 12474
KL YDSKIIESSKK WQT K+K + I I FF I R TT
Sbjct: 1043 KLRYDSKIIESSKKIWQTFKRKNTRLIRKSIFFFKFCIEQMSIAIFLGIINIPRITTQLF 1102
Query: 12475 YFSRYR*YSKNYYTTFC*FNKKNS*SIYLQE*GKWRKKKNTIYFISTIKNFISKKNFFSY 12654
+ S + K Y N++N KKKNT+YFISTIKN IS K SY
Sbjct: 1103 FESTKKILDKYIYK-----NEENG-----------EKKKNTLYFISTIKNLISNKKKMSY 1146
Query: 12655 DLYSLSQAYVFYKLSQIQVSNFSKLKSFFEYNIYITSFFVKNQIKDFFQEQGIFHYEWKD 12834
DL SLSQAYVFYKLSQI+VSNF KLK+ EYNI ITSFFVKN+IK FFQE GIFHYE K+
Sbjct: 1147 DLCSLSQAYVFYKLSQIKVSNFCKLKAVLEYNICITSFFVKNKIKVFFQEHGIFHYELKN 1206
Query: 12835 KTFLNSEINQWKNWLRSHSQYNLPQIAWARLVTQKWKNKINQDSLVLNPSLNKVDSYEKN 13014
KTFLNSE+NQWKNWLRS QYNLPQI+WARLVTQ WKNKIN+DSLVLNPSL K DSYEK
Sbjct: 1207 KTFLNSEVNQWKNWLRSQYQYNLPQISWARLVTQNWKNKINKDSLVLNPSLTKEDSYEKK 1266
Query: 13015 FFDNYKKQNFCEANSFFNPKHKQNFKKDSIYNLFCYKSIHSTEKFFDMSTG--LENLLVS 13188
FDNYKKQ F EA+S NPKH N KKDSIYNLFCYKSIHSTEK FDMS G L+N LVS
Sbjct: 1267 KFDNYKKQKFFEADSLLNPKH--NVKKDSIYNLFCYKSIHSTEKNFDMSIGIALDNCLVS 1324
Query: 13189 CFLEKYNIRSIGEIRHRKYLDSRILNFWFRKKVNIEP--DTKSKKKYIKTKVQNYQRIDK 13362
FLEKYNIR +GEIRHRKYLD RILNFWF KKV IEP DTKSKKKYI TKVQNYQ+IDK
Sbjct: 1325 SFLEKYNIRGMGEIRHRKYLDWRILNFWFTKKVTIEPWVDTKSKKKYINTKVQNYQKIDK 1384
Query: 13363 ITKTSLANQKINFFDWMGMNEEILNHRITNFDFFFFPEFFLFSSTYKMKPWVIPIKLLLF 13542
IT+T LAN+K NFFDWMGMNEEILN RITNF+FFFFPEFFLFSSTYKMKPWVIPIKLLL
Sbjct: 1385 ITQTDLANKKRNFFDWMGMNEEILNQRITNFEFFFFPEFFLFSSTYKMKPWVIPIKLLLL 1444
Query: 13543 NFNETKNVNKQITLKKKGFISSNENKFLRLFNLNKEENESAGQEEFESDKETKINMESAL 13722
NFNE NVNK+I KKKGFI SNE + LR +NLNKEE ESAGQ E ESDKETK N E+A
Sbjct: 1445 NFNENINVNKKIIRKKKGFIPSNEKESLRFYNLNKEEKESAGQVELESDKETKRNPEAAR 1504
Query: 13723 SKQEKNIEENYTESKIKKSQNKKQPKSNTDEELDLFLKRYSRFQFRWNC-FNQKIINNIR 13899
QEKNIEEN+ ES IKK +NKKQ KSNT+ ELDLFL RYSRFQ RWNC FNQKI+NN++
Sbjct: 1505 LNQEKNIEENFAESTIKKRKNKKQYKSNTEAELDLFLTRYSRFQLRWNCFFNQKILNNVK 1564
Query: 13900 VYCLLIRLKNPNEITISCIERGEMSLDILMIEKNCTFSKLMKKGILIVEPVRLSVKNDGQ 14079
VYCLL+RL NPNEI +S IERGEMSLDILMIEKN TF+KLMKKGILI+EPVRLSV+NDGQ
Sbjct: 1565 VYCLLVRLNNPNEIAVSSIERGEMSLDILMIEKNFTFAKLMKKGILIIEPVRLSVQNDGQ 1624
Query: 14080 LIIYRTIGISLVHKNKQKISKRSKKKSYI------------------YKKNNYDFFVPET 14205
LIIYRTIGISLVHKNK KISKR KKKSYI KKNNYDFFVPE
Sbjct: 1625 LIIYRTIGISLVHKNKHKISKRYKKKSYINKKFFEKSITKYQNKTVNKKKNNYDFFVPEK 1684
Query: 14206 ILSPKRRKEFRILICFNLKKKNARDRNSKFDTNIQNLTTVLNKKK--DLDKDKKNLIKLK 14379
ILSPKRR+EFRILICFNLKKKNARD NS+FD NIQNLTTVL+KKK DLDKDK NLI LK
Sbjct: 1685 ILSPKRRREFRILICFNLKKKNARDTNSRFDKNIQNLTTVLHKKKDLDLDKDKNNLINLK 1744
Query: 14380 SFLWPNFRLEDLACMNRYWFNTTNGNHFSMIRIHMYTRF 14496
SFLWPNF+LEDLACMNRYWFNTTNGNHFSMIRI MYTRF
Sbjct: 1745 SFLWPNFKLEDLACMNRYWFNTTNGNHFSMIRIRMYTRF 1783
Score = 630 bits (1623), Expect = 1e-179
Identities = 322/424 (75%), Positives = 357/424 (84%), Gaps = 4/424 (0%)
Frame = +2
Query: 10214 FSK*KKKEDHFLWFEKPFVTLVFDYKRWNRPNRYIKNDKIENTVRNEMSQYFFYTCQSDG 10393
F K KKKEDHFLWFEKPFVTLVFDYKRWNRPNRYIKNDKIEN VRNEMSQYFFYTCQSDG
Sbjct: 334 FFKIKKKEDHFLWFEKPFVTLVFDYKRWNRPNRYIKNDKIENIVRNEMSQYFFYTCQSDG 393
Query: 10394 KERISFTYPPNLSTFFEMIQKKIPSFTTEKTPSDQVYTCWSLVNEEKKENLKNEFLNRIE 10573
KERISFTYPPNLSTFFEMIQK+IPSFT EK DQV T WSL++EEK+ENLK EFLNRIE
Sbjct: 394 KERISFTYPPNLSTFFEMIQKRIPSFTKEKKTFDQVSTYWSLIHEEKRENLKKEFLNRIE 453
Query: 10574 ALDKKWSVENILEKTTRFCHNETQKEYLPKIYDPFLHGISRGRIKKLSPFQIITKTYKKK 10753
ALDK+WSVENILEKTTRFC+NE +KEYLPKIYDPFLHGISRGRIKKL PFQIIT+TY+K
Sbjct: 454 ALDKEWSVENILEKTTRFCYNEAKKEYLPKIYDPFLHGISRGRIKKLPPFQIITETYRKN 513
Query: 10754 NIRGSWINKIHGILLKINSQKFEQTIEKFKRKSLSIEKKLSFFSEP-QEEKIQSEEEIKI 10930
N+ GSWINKIHG+LLKIN +KFEQTIEKF RKSLSIEKKLSFFSEP QEEKI SEEEIK
Sbjct: 514 NLGGSWINKIHGLLLKINYKKFEQTIEKFNRKSLSIEKKLSFFSEPQQEEKINSEEEIKT 573
Query: 10931 FKILFDVVIIYNNDQTLIKNFIDFMEINKQVPQWSYKLTSELEAVEGETEENIPTEPGIR 11110
FK LFD+V +NDQTLIKNF+DF EINK+VP+WSYKL SELE +EGE EEN+P EPGIR
Sbjct: 574 FKFLFDIVRTDSNDQTLIKNFMDFPEINKKVPRWSYKLISELEELEGENEENVPMEPGIR 633
Query: 11111 SRKAKLVVVFTDLKEPHNEIYTNLKDNQNSDQPDEMTLIRYSEQSDFRRDIIKGSMRSQ- 11287
SRKAK VVVFTD KEPH EIYTNLKDNQNSDQ DEM LIRYS+QSDFRR+IIKGSMRSQ
Sbjct: 634 SRKAKRVVVFTD-KEPHGEIYTNLKDNQNSDQNDEMALIRYSQQSDFRREIIKGSMRSQR 692
Query: 11288 GVNCYWDFCKPK-HIRPFF**NR*IFFFFV*YMGAKKKFLEISCGKKKLLFIKTKKNNQK 11464
W+F + K H FF +FFF G KKK ++ KKK+ + +++ ++
Sbjct: 693 RKTVIWEFFQAKVHSPLFFDRIDKLFFFSFDIWGLKKKIIKNFIWKKKIDKKEEEQSKRE 752
Query: 11465 KTNK 11476
+T +
Sbjct: 753 ETRR 756
Score = 122 bits (304), Expect = 1e-026
Identities = 82/186 (44%), Positives = 106/186 (56%), Gaps = 9/186 (4%)
Frame = +2
Query: 12302 KKFQKKKKN*LIVVTNWVMTLK*LSHQKKVGRH*K-KNTRLIRKSVFFIKFCVEQLSITI 12478
++ K+K+N T K + KK+ + K KNTRLIRKS+FF KFC+EQ+SI I
Sbjct: 1028 EEISKEKQNLTNSCTKLRYDSKIIESSKKIWQTFKRKNTRLIRKSIFFFKFCIEQMSIAI 1087
Query: 12479 FLGIVNIPRITTQLFVDSTKKILDRYIYKNEENGEKKK--IPFILFRL*KISYQKKIFLV 12652
FLGI+NIPRITTQLF +STKKILD+YIYKNEENGEKKK + FI IS +KK
Sbjct: 1088 FLGIINIPRITTQLFFESTKKILDKYIYKNEENGEKKKNTLYFISTIKNLISNKKK---- 1143
Query: 12653 MTYTLYHKHMYFTNY--HKFKLVTFLN*SLFLNITYT*HPFLLRIK*RIFFKNKESFIMN 12826
M+Y L + Y + K+ F L F ++ K ++FF+ F
Sbjct: 1144 MSYDLCSLSQAYVFYKLSQIKVSNFCKLKAVLEYNICITSFFVKNKIKVFFQEHGIFHYE 1203
Query: 12827 GKIKPF 12844
K K F
Sbjct: 1204 LKNKTF 1209
>TAIR9_protein||ATCG01110.1 | Symbols: NDHH | Encodes the 49KDa plastid NAD(P)H
dehydrogenase subunit H protein. Its transcription is regulated by an
ndhF-specific plastid sigma factor, SIG4. | chrC:122011-123192 REVERSE
Length = 394
Score = 803 bits (2072), Expect = 1e-231
Identities = 388/394 (98%), Positives = 392/394 (99%)
Frame = +1
Query: 15250 MKKPVTGKDLMIVNMGPHHPSMHGVLRLIVTLDGEDVVDCEPILGYLHRGMEKIAENRAI 15429
MK+PVTGKDLMIVNMGPHHPSMHGVLRLIVTLDGEDVVDCEPILGYLHRGMEKIAENRAI
Sbjct: 1 MKRPVTGKDLMIVNMGPHHPSMHGVLRLIVTLDGEDVVDCEPILGYLHRGMEKIAENRAI 60
Query: 15430 IQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGP 15609
IQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGP
Sbjct: 61 IQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGP 120
Query: 15610 FMADIGAQTPFFYIFREREFVYDLFEAATGMRMMHNFFRIGGIAADLPYGWVDKCLDFCD 15789
FMADIGAQTPFFYIFREREFVYDLFEAATGMRMMHNFFRIGGIAADLPYGW+DKCLDFCD
Sbjct: 121 FMADIGAQTPFFYIFREREFVYDLFEAATGMRMMHNFFRIGGIAADLPYGWIDKCLDFCD 180
Query: 15790 YFLTEVVEYQKLITRNPIFLERVEGVGIIGGEEAINWGLSGPMLRASGIPWDLRKVDRYE 15969
YFLTEVVEYQKLITRNPIFLERVEGVGIIGGEEAINWGLSGPMLRASGIPWDLRK+DRYE
Sbjct: 181 YFLTEVVEYQKLITRNPIFLERVEGVGIIGGEEAINWGLSGPMLRASGIPWDLRKIDRYE 240
Query: 15970 SYDEFEWEIQWQKQGDSLARYLVRLSEMTESIKIIQQALEGLPGGPYENLESRGFDKKRN 16149
SYDEFEWEIQWQKQGDSLARYLVRLSEMTESIKIIQQALEGLPGGPYENLESRGFD+KRN
Sbjct: 241 SYDEFEWEIQWQKQGDSLARYLVRLSEMTESIKIIQQALEGLPGGPYENLESRGFDRKRN 300
Query: 16150 PEWNDFEYRFISKKPSPTFELSKQELYVRVEAPKGELGIFLIGDQSGFPWRWKIRPPGFI 16329
PEWNDFEYRFISKKPSPTFELSKQELYVRVEAPKGELGIFLIGDQSGFPWRWKIRPPGFI
Sbjct: 301 PEWNDFEYRFISKKPSPTFELSKQELYVRVEAPKGELGIFLIGDQSGFPWRWKIRPPGFI 360
Query: 16330 NLQILP*LVKRMKLADIMTILGSIDIIMGEVDR* 16431
NLQILP LVKRMKLADIMTILGSIDIIMGEVDR*
Sbjct: 361 NLQILPELVKRMKLADIMTILGSIDIIMGEVDR* 394
>TAIR9_protein||ATCG01100.1 | Symbols: NDHA | NADH dehydrogenase ND1 |
chrC:119847-122009 REVERSE
Length = 361
Score = 695 bits (1792), Expect = 4e-199
Identities = 352/361 (97%), Positives = 359/361 (99%)
Frame = +2
Query: 16433 MIIYATEVQTINSFVRLESLKEVYGLIWIFVPIFSLVLGIITGVLVIVWLEREISAGIQQ 16612
MIIYAT VQTINSFV+LESLKEVYGLIWIFVPIFSLVLGIITGVLVIVWLEREISAGIQQ
Sbjct: 1 MIIYATAVQTINSFVKLESLKEVYGLIWIFVPIFSLVLGIITGVLVIVWLEREISAGIQQ 60
Query: 16613 RIGPEYAGPLGILQALADGTKLLFKEDLRPSRGNTPLFSIGPSIAVISILLSYSVIPFSN 16792
RIGPEYAGPLGILQALADGTKLLFKE+LRPSRGNTPLFSIGPSIAVISILLSYSVIPFSN
Sbjct: 61 RIGPEYAGPLGILQALADGTKLLFKENLRPSRGNTPLFSIGPSIAVISILLSYSVIPFSN 120
Query: 16793 HLVLADLNIGIFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQAISYEIPLTLCVL 16972
HLVLADLNIGIFLWIAISS+APIGLLMSGYGSNNKYSFLGGLRAAAQ+ISYEIPLTLCVL
Sbjct: 121 HLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
Query: 16973 SISLLSNSLSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAECERLPFDLPEAEEEL 17152
SISLLSNSLSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAECERLPFDLPEAEEEL
Sbjct: 181 SISLLSNSLSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAECERLPFDLPEAEEEL 240
Query: 17153 IAGYQTEYSGIKFGLFYVASYLNLLISSLFVTVLYLGGWNISIPYISILELFEKDQIFGT 17332
IAGYQTEYSGIKFGLFYVASYLNLLISSLFVTVLYLGGWNISIPYISILELF++DQIFGT
Sbjct: 241 IAGYQTEYSGIKFGLFYVASYLNLLISSLFVTVLYLGGWNISIPYISILELFQRDQIFGT 300
Query: 17333 TIGIFITLAKTYLFLFISIATRWTLPRLRMDQLLNLGWKFLLPISLGNLLLTTSFQLFSL 17512
TIGIFITLAKTYLFLF+SIATRWTLPRLRMDQLLNLGWKFLLPISLGNLLLTTSFQLFSL
Sbjct: 301 TIGIFITLAKTYLFLFVSIATRWTLPRLRMDQLLNLGWKFLLPISLGNLLLTTSFQLFSL 360
Query: 17513 * 17515
*
Sbjct: 361 * 361
>TAIR9_protein||ATCG01000.1 | Symbols: YCF1.1 | hypothetical protein |
chrC:109405-110436 FORWARD
Length = 344
Score = 668 bits (1723), Expect = 4e-191
Identities = 331/340 (97%), Positives = 333/340 (97%)
Frame = +1
Query: 9214 VMVFQSFILGNLVSLCMKIINSVAVVGLYYGFLTTFSIGPSYLFLLRARVMDEGEEGTEK 9393
VMVFQSFILGNLVSLCMKIINSV VVGLYYGFLTTFSIGPSYLFLLRARVMDEGEEGTEK
Sbjct: 1 VMVFQSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMDEGEEGTEK 60
Query: 9394 KVSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGST 9573
KVSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGST
Sbjct: 61 KVSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGST 120
Query: 9574 TRNEMRNLRIQCVFLNNFIFQLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLI 9753
TRNEMRNLRIQCVFLNN IFQLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLI
Sbjct: 121 TRNEMRNLRIQCVFLNNLIFQLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLI 180
Query: 9754 GHILFMKWVGLVLVWIQQNNSIRSNVLIRSNKYKFLVSELRNSMTRIFSIILFITCVYYL 9933
GHILFMKWVGLVLVWIQQNNSIRSNV+IRSNKYKFLVSELRNSM RIFSI+LFITCVYYL
Sbjct: 181 GHILFMKWVGLVLVWIQQNNSIRSNVVIRSNKYKFLVSELRNSMARIFSILLFITCVYYL 240
Query: 9934 GRIPSPIFTKKLKGTSETGGTKQDQEVSTEEAPFPSLFSEEREDLDKIDEMEEIGVNGKD 10113
GRIPSPIFTKKLKGTSETGGTKQDQEVSTEEAPFPSLFSEE EDLDKIDEMEEI VNGKD
Sbjct: 241 GRIPSPIFTKKLKGTSETGGTKQDQEVSTEEAPFPSLFSEEGEDLDKIDEMEEIRVNGKD 300
Query: 10114 KINKDDEFHVRTYYNYKTVSENRDGNKENSNLEFFKIKKK 10233
KINKDDEFHVRTYYNYKTVSEN GNKENSNLEFFKIKKK
Sbjct: 301 KINKDDEFHVRTYYNYKTVSENLYGNKENSNLEFFKIKKK 340
>TAIR9_protein||ATMG00370.1 | Symbols: ORF199 | hypothetical protein |
chrM:104954-105553 REVERSE
Length = 200
Score = 340 bits (871), Expect = 2e-092
Identities = 171/188 (90%), Positives = 176/188 (93%), Gaps = 3/188 (1%)
Frame = +1
Query: 9217 MVFQSFILGNLVSLCMKIINSVAVVGLYYGFLTTFSIGPSYLFLLRARVMDEGEEGTEKK 9396
MVFQSFILGNLV LCMKIINSV VVGLYYGFLTTFSIGPSYLFLLRARVMDEGEEGTEKK
Sbjct: 1 MVFQSFILGNLVYLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMDEGEEGTEKK 60
Query: 9397 VSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFH-FFWNNHKHFFDYGST 9573
VSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFH FFWNNHKHFFDYGST
Sbjct: 61 VSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFFWNNHKHFFDYGST 120
Query: 9574 TRNEMRNLRIQCVFLNNFIFQLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLI 9753
TRNEMRNLRIQCVF NN IF+LFNH ILPSSMLARLVNIYMFRCNNKMLFVTSSFV +
Sbjct: 121 TRNEMRNLRIQCVFPNNLIFKLFNHLILPSSMLARLVNIYMFRCNNKMLFVTSSFV--VC 178
Query: 9754 GHILFMKW 9777
+L ++W
Sbjct: 179 VRMLLVEW 186
>TAIR9_protein||AT2G07739.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s: Ycf1
(InterPro:IPR008896); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:ATMG00370.1); Has 357 Blast hits to 357 proteins
in 115 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 357; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr2:3495511-3496110 REVERSE
Length = 200
Score = 338 bits (865), Expect = 1e-091
Identities = 170/188 (90%), Positives = 175/188 (93%), Gaps = 3/188 (1%)
Frame = +1
Query: 9217 MVFQSFILGNLVSLCMKIINSVAVVGLYYGFLTTFSIGPSYLFLLRARVMDEGEEGTEKK 9396
MVFQSFILGNLV LCMKIINSV VVGLYYGFLTTFSIGP YLFLLRARVMDEGEEGTEKK
Sbjct: 1 MVFQSFILGNLVYLCMKIINSVVVVGLYYGFLTTFSIGPFYLFLLRARVMDEGEEGTEKK 60
Query: 9397 VSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFH-FFWNNHKHFFDYGST 9573
VSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFH FFWNNHKHFFDYGST
Sbjct: 61 VSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFFWNNHKHFFDYGST 120
Query: 9574 TRNEMRNLRIQCVFLNNFIFQLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLI 9753
TRNEMRNLRIQCVF NN IF+LFNH ILPSSMLARLVNIYMFRCNNKMLFVTSSFV +
Sbjct: 121 TRNEMRNLRIQCVFPNNLIFKLFNHLILPSSMLARLVNIYMFRCNNKMLFVTSSFV--VC 178
Query: 9754 GHILFMKW 9777
+L ++W
Sbjct: 179 VRMLLVEW 186
>TAIR9_protein||ATMG00510.1 | Symbols: NAD7 | NADH dehydrogenase subunit 7 |
chrM:132071-138153 FORWARD
Length = 395
Score = 266 bits (678), Expect = 5e-070
Identities = 148/388 (38%), Positives = 220/388 (56%), Gaps = 13/388 (3%)
Frame = +1
Query: 15289 NMGPHHPSMHGVLRLIVTLDGEDVVDCEPILGYLHRGMEKIAENRAIIQYLPYVTRWDYL 15468
N GP HP+ HGV RL++ ++GE V EP +G LHRG EK+ E + +Q LPY R DY+
Sbjct: 14 NFGPQHPAAHGVSRLVLEMNGEVVERAEPHIGSLHRGTEKLIEYKTYLQALPYSDRSDYV 73
Query: 15469 ATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFY 15648
+ M E + E+L N +VP RA YIRV+ E++RI++H L L D+GA TPF +
Sbjct: 74 SMMAQEHAHSSAVEKLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGALTPFLW 133
Query: 15649 IFREREFVYDLFEAATGMRMMHNFFRIGGIAADLPYGWVDKCLDFCDYFLTEVVEYQKLI 15828
F ERE + + +E +G RM +F R GG+A DLP G F F + + E +++
Sbjct: 134 AFEEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEMS 193
Query: 15829 TRNPIFLERVEGVGIIGGEEAINWGLSGPMLRASGIPWDLRKVDRYESYDEFEWEIQWQK 16008
T N I+ +R+ +G + ++A +WG SG MLR G+ WD R+ Y+ +D+ + ++
Sbjct: 194 TGNRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGPGVCWDSRRAAPYDVHDQSDLDVPVGT 253
Query: 16009 QGDSLARYLVRLSEMTESIKIIQQALEGLPGGPYENLESRGFDKKRNPEWNDFEYRFISK 16188
+GD RY +R+ EM +S++II Q L +P G + D+K P + + +
Sbjct: 254 RGDRYDRYCIRIEEMRQSLRIIVQCLNQMPSGMI-----KADDRKLCPP-SRCRMKLSME 307
Query: 16189 KPSPTFELSKQ-------ELYVRVEAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILP 16347
FEL + Y VEAPKGE G+FL+ + S P+R KIR PG + Q L
Sbjct: 308 SSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLD 367
Query: 16348 *LVKRMKLADIMTILGSIDIIMGEVDR* 16431
+ K AD++TI+G+ DI+ GEVDR*
Sbjct: 368 SMSKHHMPADVVTIIGTQDIVFGEVDR* 395
>TAIR9_protein||ATMG01120.1 | Symbols: NAD1B, NAD1 | Encodes subunit of
mitochondrial NAD(P)H dehydrogenase that is trans-spliced from three
precursors, NAD1A, NAD1B, and NAD1C. | chrM:287917-289083 REVERSE
Length = 326
Score = 190 bits (482), Expect = 3e-047
Identities = 103/254 (40%), Positives = 160/254 (62%), Gaps = 6/254 (2%)
Frame = +2
Query: 16514 WIFVP--IFSLVLGIITGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFK 16687
+I VP I ++L ++ GV +V ER++ A +Q+R GP+ G G+LQ LADG+KL+ K
Sbjct: 2 YIAVPAEILGIILPLLLGVAFLVLAERKVMAFVQRRKGPDVVGSFGLLQPLADGSKLILK 61
Query: 16688 EDLRPSRGNTPLFSIGPSIAVISILLSYSVIPFSNHLVLADLNIGIFLWIAISSVAPIGL 16867
E + PS N LF + P + L++ +V+PF +VL+D NIG+ AISS+ G+
Sbjct: 62 EPISPSSANFFLFRMAPVATFMLSLVARAVVPFDYGMVLSDPNIGLLYLFAISSLGVYGI 121
Query: 16868 LMSGYGSNNKYSFLGGLRAAAQAISYEIPLTLCVLSISLLSNSLSTVDIVEAQSKYGFWG 17047
+++G SN+KY+FLG LR+AAQ +SYE+ + L ++++ + ++ +IV AQ + W
Sbjct: 122 IIAGRSSNSKYAFLGALRSAAQMVSYEVSIGLILITVLICVGPRNSSEIVMAQKQ--IWS 179
Query: 17048 WNLWRQPIGFIIFLISSLAECERLPFDLPEAEEELIAGYQTEYSGIKFGLFYVASYLNLL 17227
+ P+ ++FLIS LAE R PFDLPEAE E +AGY EYS + LF++ Y N++
Sbjct: 180 -GIPLFPV-LVMFLISRLAETNRAPFDLPEAEAESVAGYNVEYSSMGSALFFLGEYANMI 237
Query: 17228 ISSLFVTVLYLGGW 17269
+ S T+ + GGW
Sbjct: 238 LMSGPCTLFFPGGW 251
>TAIR9_protein||ATMG00516.1 | Symbols: NAD1C, NAD1 | Encodes subunit of
mitochondrial NAD(P)H dehydrogenase that is trans-spliced from three
precursors, NAD1A, NAD1B, and NAD1C. | chrM:143219-147048 REVERSE
Length = 326
Score = 190 bits (482), Expect = 3e-047
Identities = 103/254 (40%), Positives = 160/254 (62%), Gaps = 6/254 (2%)
Frame = +2
Query: 16514 WIFVP--IFSLVLGIITGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFK 16687
+I VP I ++L ++ GV +V ER++ A +Q+R GP+ G G+LQ LADG+KL+ K
Sbjct: 2 YIAVPAEILGIILPLLLGVAFLVLAERKVMAFVQRRKGPDVVGSFGLLQPLADGSKLILK 61
Query: 16688 EDLRPSRGNTPLFSIGPSIAVISILLSYSVIPFSNHLVLADLNIGIFLWIAISSVAPIGL 16867
E + PS N LF + P + L++ +V+PF +VL+D NIG+ AISS+ G+
Sbjct: 62 EPISPSSANFFLFRMAPVATFMLSLVARAVVPFDYGMVLSDPNIGLLYLFAISSLGVYGI 121
Query: 16868 LMSGYGSNNKYSFLGGLRAAAQAISYEIPLTLCVLSISLLSNSLSTVDIVEAQSKYGFWG 17047
+++G SN+KY+FLG LR+AAQ +SYE+ + L ++++ + ++ +IV AQ + W
Sbjct: 122 IIAGRSSNSKYAFLGALRSAAQMVSYEVSIGLILITVLICVGPRNSSEIVMAQKQ--IWS 179
Query: 17048 WNLWRQPIGFIIFLISSLAECERLPFDLPEAEEELIAGYQTEYSGIKFGLFYVASYLNLL 17227
+ P+ ++FLIS LAE R PFDLPEAE E +AGY EYS + LF++ Y N++
Sbjct: 180 -GIPLFPV-LVMFLISRLAETNRAPFDLPEAEAESVAGYNVEYSSMGSALFFLGEYANMI 237
Query: 17228 ISSLFVTVLYLGGW 17269
+ S T+ + GGW
Sbjct: 238 LMSGPCTLFFPGGW 251
>TAIR9_protein||ATMG01275.1 | Symbols: NAD1A, NAD1, ND1 | Encodes subunit of
mitochondrial NAD(P)H dehydrogenase that is trans-spliced from three
precursors, NAD1A, NAD1B, and NAD1C. | chrM:318004-318390 REVERSE
Length = 326
Score = 190 bits (482), Expect = 3e-047
Identities = 103/254 (40%), Positives = 160/254 (62%), Gaps = 6/254 (2%)
Frame = +2
Query: 16514 WIFVP--IFSLVLGIITGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFK 16687
+I VP I ++L ++ GV +V ER++ A +Q+R GP+ G G+LQ LADG+KL+ K
Sbjct: 2 YIAVPAEILGIILPLLLGVAFLVLAERKVMAFVQRRKGPDVVGSFGLLQPLADGSKLILK 61
Query: 16688 EDLRPSRGNTPLFSIGPSIAVISILLSYSVIPFSNHLVLADLNIGIFLWIAISSVAPIGL 16867
E + PS N LF + P + L++ +V+PF +VL+D NIG+ AISS+ G+
Sbjct: 62 EPISPSSANFFLFRMAPVATFMLSLVARAVVPFDYGMVLSDPNIGLLYLFAISSLGVYGI 121
Query: 16868 LMSGYGSNNKYSFLGGLRAAAQAISYEIPLTLCVLSISLLSNSLSTVDIVEAQSKYGFWG 17047
+++G SN+KY+FLG LR+AAQ +SYE+ + L ++++ + ++ +IV AQ + W
Sbjct: 122 IIAGRSSNSKYAFLGALRSAAQMVSYEVSIGLILITVLICVGPRNSSEIVMAQKQ--IWS 179
Query: 17048 WNLWRQPIGFIIFLISSLAECERLPFDLPEAEEELIAGYQTEYSGIKFGLFYVASYLNLL 17227
+ P+ ++FLIS LAE R PFDLPEAE E +AGY EYS + LF++ Y N++
Sbjct: 180 -GIPLFPV-LVMFLISRLAETNRAPFDLPEAEAESVAGYNVEYSSMGSALFFLGEYANMI 237
Query: 17228 ISSLFVTVLYLGGW 17269
+ S T+ + GGW
Sbjct: 238 LMSGPCTLFFPGGW 251
>TAIR9_protein||ATCG01120.1 | Symbols: RPS15 | encodes a chloroplast ribosomal
protein S15, a constituent of the small subunit of the ribosomal
complex | chrC:123296-123562 REVERSE
Length = 89
Score = 126 bits (315), Expect = 7e-028
Identities = 63/68 (92%), Positives = 66/68 (97%)
Frame = +1
Query: 14881 MIKNTFISFQEKKEESKGSVEFQVFSFTNKIRRLTSHLELHRKDYLSQRGLRKILGKRQR 15060
MIKN ISF+E+KEES+GSVEFQVFSFTNKIRRLTSHLELHRKDYLSQRGLRKILGKRQR
Sbjct: 1 MIKNIVISFEEQKEESRGSVEFQVFSFTNKIRRLTSHLELHRKDYLSQRGLRKILGKRQR 60
Query: 15061 LLAYLSKK 15084
LLAYLSKK
Sbjct: 61 LLAYLSKK 68
>TAIR9_protein||AT2G07785.1 | Symbols: | NADH-ubiquinone oxidoreductase,
putative | chr2:3348114-3348413 FORWARD
Length = 100
Score = 81 bits (199), Expect = 2e-014
Identities = 41/98 (41%), Positives = 62/98 (63%)
Frame = +2
Query: 16598 AGIQQRIGPEYAGPLGILQALADGTKLLFKEDLRPSRGNTPLFSIGPSIAVISILLSYSV 16777
A +Q+R GP+ G G+LQ LADG+KL+ KE + PS N LF + P + L++ +V
Sbjct: 2 AFVQRRKGPDVVGSFGLLQPLADGSKLILKEPISPSSANFFLFRMAPVATFMLSLVARAV 61
Query: 16778 IPFSNHLVLADLNIGIFLWIAISSVAPIGLLMSGYGSN 16891
+PF +VL+D NIG+ AISS+ G++++G SN
Sbjct: 62 VPFDYGMVLSDPNIGLLYLFAISSLGVYGIIIAGRSSN 99
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,186,182,936
Number of Sequences: 33410
Number of Extensions: 12186182936
Number of Successful Extensions: 391856999
Number of sequences better than 0.0: 0
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