BLASTX 7.6.2
Query= UN23584 /QuerySize=723
(722 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297808263|ref|XP_002872015.1| predicted protein [Arabidopsis ... 243 3e-062
gi|30688577|ref|NP_851056.1| histone deacetylase HDT2 [Arabidops... 234 1e-059
gi|145358319|ref|NP_197657.3| histone deacetylase HDT2 [Arabidop... 234 1e-059
gi|297815600|ref|XP_002875683.1| hypothetical protein ARALYDRAFT... 191 8e-047
gi|195639676|gb|ACG39306.1| histone deacetylase 2b [Zea mays] 176 4e-042
gi|242091217|ref|XP_002441441.1| hypothetical protein SORBIDRAFT... 175 6e-042
gi|269969916|gb|ACZ54947.1| type 2 histone deacetylase c [Nicoti... 173 2e-041
gi|18407844|ref|NP_566872.1| histone deacetylase HDT1 [Arabidops... 168 9e-040
gi|2392769|gb|AAB70032.1| putative histone deacetylase [Arabidop... 168 9e-040
gi|242091631|ref|XP_002441648.1| hypothetical protein SORBIDRAFT... 168 1e-039
gi|255573038|ref|XP_002527449.1| Histone deacetylase 2a, putativ... 162 5e-038
gi|269969912|gb|ACZ54945.1| type 2 histone deacetylase a [Nicoti... 161 1e-037
gi|73919938|sp|Q6V9I6.1|HDT1_SOLCH RecName: Full=Histone deacety... 160 2e-037
gi|269969914|gb|ACZ54946.1| type 2 histone deacetylase b [Nicoti... 159 3e-037
gi|73919943|sp|Q9M4U4.1|HDT3_MAIZE RecName: Full=Histone deacety... 157 2e-036
gi|162459285|ref|NP_001105402.1| histone deacetylase HDT1 [Zea m... 157 2e-036
gi|195606718|gb|ACG25189.1| histone deacetylase 2b [Zea mays] 156 5e-036
gi|334185733|ref|NP_001190012.1| histone deacetylase HDT1 [Arabi... 152 5e-035
gi|81074563|gb|ABB55369.1| histone deacetylase 2a-like [Solanum ... 149 3e-034
gi|162463122|ref|NP_001105631.1| histone deacetylase HDT2 [Zea m... 148 1e-033
>gi|297808263|ref|XP_002872015.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 307
Score = 243 bits (618), Expect = 3e-062
Identities = 135/226 (59%), Positives = 166/226 (73%), Gaps = 24/226 (10%)
Frame = +2
Query: 65 FWGVEVLAGKSVKVKPDFETLIHVSQASLD-KGKKGETALLYVTVDGKKLVMGTLSQGNI 241
+ G+EV GK KV P+ ++L+H+SQASLD K K GE+ +L VTVDG KLV+GTLSQ
Sbjct: 9 YLGIEVKPGKPTKVTPEEDSLVHISQASLDCKVKSGESVVLTVTVDGTKLVIGTLSQEKF 68
Query: 242 PQISFDLVFEKEFELSHSLESGSVHFVGYKSPNMPEDEEDFSDSEEEE-EEAAAVPATAV 418
PQISFDLVFE+EFE+SH+ G+VHFVGY+SPN+ D ED++ SEEE+ EA P A
Sbjct: 69 PQISFDLVFEREFEISHNGTKGTVHFVGYRSPNI--DHEDYTSSEEEDVPEAVPAPVPAA 126
Query: 419 -------------TVKADSKPKAKPAE----EVKPESDDDDDEDEEEDDSEEDGSDSEKG 547
VKADSKPKAKPAE EVKPES+DD+D +EED+S +D DSEKG
Sbjct: 127 VAVNGSAGAAASNVVKADSKPKAKPAEVKPAEVKPESEDDEDSSDEEDESADD-DDSEKG 185
Query: 548 MDVDEDDSEDEEDDSEDEDDETPKKPEVVSNKKRPNESAASKAAIS 685
MDVDEDDS+DEED+SE+E++ETPKKPE + NKKRPNES SK +S
Sbjct: 186 MDVDEDDSDDEEDESEEEEEETPKKPEPI-NKKRPNES-TSKTPVS 229
>gi|30688577|ref|NP_851056.1| histone deacetylase HDT2 [Arabidopsis thaliana]
Length = 306
Score = 234 bits (596), Expect = 1e-059
Identities = 136/227 (59%), Positives = 164/227 (72%), Gaps = 20/227 (8%)
Frame = +2
Query: 59 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLD-KGKKGETALLYVTVDGKKLVMGTLSQG 235
MEFWGV V + KV P+ ++L+H+SQASLD K GE+ +L VTV G KLV+GTLSQ
Sbjct: 1 MEFWGVAVTPKNATKVTPEEDSLVHISQASLDCTVKSGESVVLSVTVGGAKLVIGTLSQD 60
Query: 236 NIPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNMPEDEEDFSDSEEEEEEAAAVPATA 415
PQISFDLVF+KEFELSHS +VHF+GYKSPN+ +D+ SD E+ E A TA
Sbjct: 61 KFPQISFDLVFDKEFELSHSGTKANVHFIGYKSPNIEQDDFTSSDDEDVPEAVPAPAPTA 120
Query: 416 VT---------VKADSKPKAKPAE----EVKPESDDDDDEDEEEDDSEEDGSDSEKGMDV 556
VT VKAD+KPKAKPAE E KPESD++D+ D +ED+SEED DSEKGMDV
Sbjct: 121 VTANGNAGAAVVKADTKPKAKPAEVKPAEEKPESDEEDESD-DEDESEED-DDSEKGMDV 178
Query: 557 DEDDS-EDEEDDSED-EDDETPKKPEVVSNKKRPNESAASKAAISAK 691
DEDDS +DEE+DSED E++ETPKKPE + NKKRPNES SK +S K
Sbjct: 179 DEDDSDDDEEEDSEDEEEEETPKKPEPI-NKKRPNES-VSKTPVSGK 223
>gi|145358319|ref|NP_197657.3| histone deacetylase HDT2 [Arabidopsis thaliana]
Length = 305
Score = 234 bits (596), Expect = 1e-059
Identities = 136/227 (59%), Positives = 164/227 (72%), Gaps = 20/227 (8%)
Frame = +2
Query: 59 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLD-KGKKGETALLYVTVDGKKLVMGTLSQG 235
MEFWGV V + KV P+ ++L+H+SQASLD K GE+ +L VTV G KLV+GTLSQ
Sbjct: 1 MEFWGVAVTPKNATKVTPEEDSLVHISQASLDCTVKSGESVVLSVTVGGAKLVIGTLSQD 60
Query: 236 NIPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNMPEDEEDFSDSEEEEEEAAAVPATA 415
PQISFDLVF+KEFELSHS +VHF+GYKSPN+ +D+ SD E+ E A TA
Sbjct: 61 KFPQISFDLVFDKEFELSHSGTKANVHFIGYKSPNIEQDDFTSSDDEDVPEAVPAPAPTA 120
Query: 416 VT---------VKADSKPKAKPAE----EVKPESDDDDDEDEEEDDSEEDGSDSEKGMDV 556
VT VKAD+KPKAKPAE E KPESD++D+ D +ED+SEED DSEKGMDV
Sbjct: 121 VTANGNAGAAVVKADTKPKAKPAEVKPAEEKPESDEEDESD-DEDESEED-DDSEKGMDV 178
Query: 557 DEDDS-EDEEDDSED-EDDETPKKPEVVSNKKRPNESAASKAAISAK 691
DEDDS +DEE+DSED E++ETPKKPE + NKKRPNES SK +S K
Sbjct: 179 DEDDSDDDEEEDSEDEEEEETPKKPEPI-NKKRPNES-VSKTPVSGK 223
>gi|297815600|ref|XP_002875683.1| hypothetical protein ARALYDRAFT_484880
[Arabidopsis lyrata subsp. lyrata]
Length = 247
Score = 191 bits (485), Expect = 8e-047
Identities = 120/218 (55%), Positives = 143/218 (65%), Gaps = 25/218 (11%)
Frame = +2
Query: 59 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLD--KGKKGETALLYVTVDGKKLVMGTLSQ 232
MEFWG+EV GK V V P TLIHVSQASL K KKGE L+V V + LV+GTLS
Sbjct: 1 MEFWGIEVKPGKPVTVTPKEGTLIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLST 60
Query: 233 GNIPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNMPEDEEDFSDSEEEEEEAAAVPAT 412
NIPQ+ DLVFEKEFELSH+ GSV+FVGYK+PN+ +SEEEEEE VPA
Sbjct: 61 ENIPQLFCDLVFEKEFELSHTWGKGSVYFVGYKTPNIKYP----LNSEEEEEEVEEVPA- 115
Query: 413 AVTVKADSKPKAKPAEEVKPESDDDDDEDEEEDDSEEDGSDSEKGMDVDEDDSEDEEDDS 592
KA +KPKAKPA EVKP + D EEDDS+ D ++DEDDS+ ++D
Sbjct: 116 GNAAKAVAKPKAKPA-EVKPVA------DAEEDDSDSD--------EMDEDDSDGDDDSE 160
Query: 593 EDEDDETPKKPEVVSNKKRPNESAASKAAISAKKAKPA 706
E+E+ TPKKP SNKKR NE+ A K +S+KKAK A
Sbjct: 161 EEEETPTPKKP--ASNKKRANET-APKTPVSSKKAKVA 195
>gi|195639676|gb|ACG39306.1| histone deacetylase 2b [Zea mays]
Length = 304
Score = 176 bits (444), Expect = 4e-042
Identities = 102/224 (45%), Positives = 136/224 (60%), Gaps = 22/224 (9%)
Frame = +2
Query: 59 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLDKGKKGETALLYVTVDGKKLVMGTLSQGN 238
MEFWG+EV G +VK +P + ++H+SQA+L + KK + AL+YV +D +KL +GTLS
Sbjct: 1 MEFWGLEVKPGSTVKCEPGYGFVLHLSQAALGESKKSDNALMYVKIDDQKLAIGTLSVDK 60
Query: 239 IPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNMPEDEEDFS----DSEEEEEEAAAVP 406
P I FDLVF+KEFELSH+ ++ SV F GYK E++E S DSE+E+EE VP
Sbjct: 61 NPHIQFDLVFDKEFELSHTSKTTSVFFTGYKVEQPFEEDEPSSTMDLDSEDEDEE-RDVP 119
Query: 407 ATAVTVKADSK-----------PKAKPAEEVKPESDDDDDEDEEEDDSEEDGSDSEKGMD 553
KAD K P + K + DDD DEDE +D E++ DS++G+
Sbjct: 120 VVKENGKADGKKQKSQEKAVAAPSKSSPDSKKSKDDDDSDEDETDDSDEDETDDSDEGLS 179
Query: 554 VDE--DDSEDEED--DSEDEDDETPKKPEVVSNKKRPNESAASK 673
+E DDS DE+D D E+ED TPKKPEV KKR ES+ K
Sbjct: 180 SEEGDDDSSDEDDTSDDEEEDTPTPKKPEV--GKKRAAESSVLK 221
>gi|242091217|ref|XP_002441441.1| hypothetical protein SORBIDRAFT_09g026730
[Sorghum bicolor]
Length = 299
Score = 175 bits (443), Expect = 6e-042
Identities = 100/221 (45%), Positives = 136/221 (61%), Gaps = 23/221 (10%)
Frame = +2
Query: 59 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLDKGKKGETALLYVTVDGKKLVMGTLSQGN 238
MEFWG+EV G +VK +P ++H+SQA+L + KK + AL+YV VD +KL +GTLS
Sbjct: 1 MEFWGLEVKPGSTVKCEPGHGFILHLSQAALGESKKSDNALMYVKVDDQKLAIGTLSIDK 60
Query: 239 IPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNMPEDEEDFSDSEEEEEEAAAVPATAV 418
PQ+ FDLVF+KEFELSH+ ++ SV F GYK E++E DSE+EEE VP
Sbjct: 61 FPQVQFDLVFDKEFELSHTSKTTSVFFSGYKVEQPMEEDEMDLDSEDEEE--LDVPVIKE 118
Query: 419 TVKADSKPKAKPAEEV-----------KPESDDDDDEDEEEDDSEEDGSDSEKGMDV--- 556
KAD K + + V K + DDD DEDE +D +D DS++G +
Sbjct: 119 NGKADGKEQKSQEKAVAAASKSSLVSKKSKDDDDSDEDETDDSDSDDTDDSDEGEGLSPE 178
Query: 557 --DEDDSEDEEDDSEDEDDETP---KKPEVVSNKKRPNESA 664
D+DDS DE+D S+DE++ETP KKPE + KKRP E++
Sbjct: 179 EGDDDDSSDEDDTSDDEEEETPTPKKKPE--AGKKRPAENS 217
>gi|269969916|gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum]
Length = 282
Score = 173 bits (438), Expect = 2e-041
Identities = 103/227 (45%), Positives = 137/227 (60%), Gaps = 20/227 (8%)
Frame = +2
Query: 59 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLDKGKK---GETALLYVTVDGKKLVMGTLS 229
MEFWG EV +G+ + V+P + ++H+SQASL + KK E L V VDGKKL +GTL+
Sbjct: 1 MEFWGAEVKSGQPLTVQPGDDMVLHLSQASLGEAKKDKGSEPVCLSVNVDGKKLALGTLN 60
Query: 230 QGNIPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNMPEDEEDFSDSEEE-----EEEA 394
+PQ FDLVF+++FELSH+ ++GSV+F GYK+ N E EED +S+EE
Sbjct: 61 LDKLPQQQFDLVFDRDFELSHNWKNGSVYFFGYKAANPYEQEEDEDESDEEIPLTLANTG 120
Query: 395 AAVPATAVTVKADSKPKAKPAEEVKPESDDDDDEDEEEDDSEEDGSDSEKGMDVDEDDSE 574
+ + A K K K AE K DD+D+ +EDD+ ED DSE G E
Sbjct: 121 KSEAKASANDSASGKQKVKIAEPSKDAKADDEDDSSDEDDTSEDEEDSEMG--------E 172
Query: 575 DEEDDSEDE-DDETPKKPEVVSNKKRPNESAASKAAISAKKAKPATP 712
DE+D ED+ D+ETPKK E +KKRP++SA K KKAK ATP
Sbjct: 173 DEDDSDEDQSDEETPKKAE--PSKKRPSDSAI-KTPAPDKKAKFATP 216
>gi|18407844|ref|NP_566872.1| histone deacetylase HDT1 [Arabidopsis thaliana]
Length = 245
Score = 168 bits (424), Expect = 9e-040
Identities = 108/224 (48%), Positives = 133/224 (59%), Gaps = 16/224 (7%)
Frame = +2
Query: 59 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLD--KGKKGETALLYVTVDGKKLVMGTLSQ 232
MEFWG+EV +GK V V P+ LIHVSQASL K KKGE L+V V + LV+GTLS
Sbjct: 1 MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLST 60
Query: 233 GNIPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNMPEDEEDFSDSEEEEEEAAAVPAT 412
NIPQ+ DLVF+KEFELSH+ GSV+FVGYK+PN+ E SEEEEEE VPA
Sbjct: 61 ENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKTPNI----EPQGYSEEEEEEEEEVPA- 115
Query: 413 AVTVKADSKPKAKPAEEVKPESDDDDDEDEEE--DDSEEDGSDSEKGMDVDEDDSEDEED 586
KA +KPKAKPA EVKP DD++DE + + D+ + DG DSE+ +E +
Sbjct: 116 GNAAKAVAKPKAKPA-EVKPAVDDEEDESDSDGMDEDDSDGEDSEE----EEPTPKKPAS 170
Query: 587 DSEDEDDETPKKPEVVSNKKRPNESAASKAAISAKKAKPATPHP 718
+ ++ TPK P VS KK K K K A P
Sbjct: 171 SKKRANETTPKAP--VSAKKAKVAVTPQKTDEKKKGGKAANQSP 212
>gi|2392769|gb|AAB70032.1| putative histone deacetylase [Arabidopsis thaliana]
Length = 257
Score = 168 bits (424), Expect = 9e-040
Identities = 108/224 (48%), Positives = 133/224 (59%), Gaps = 16/224 (7%)
Frame = +2
Query: 59 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLD--KGKKGETALLYVTVDGKKLVMGTLSQ 232
MEFWG+EV +GK V V P+ LIHVSQASL K KKGE L+V V + LV+GTLS
Sbjct: 1 MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLST 60
Query: 233 GNIPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNMPEDEEDFSDSEEEEEEAAAVPAT 412
NIPQ+ DLVF+KEFELSH+ GSV+FVGYK+PN+ E SEEEEEE VPA
Sbjct: 61 ENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKTPNI----EPQGYSEEEEEEEEEVPA- 115
Query: 413 AVTVKADSKPKAKPAEEVKPESDDDDDEDEEE--DDSEEDGSDSEKGMDVDEDDSEDEED 586
KA +KPKAKPA EVKP DD++DE + + D+ + DG DSE+ +E +
Sbjct: 116 GNAAKAVAKPKAKPA-EVKPAVDDEEDESDSDGMDEDDSDGEDSEE----EEPTPKKPAS 170
Query: 587 DSEDEDDETPKKPEVVSNKKRPNESAASKAAISAKKAKPATPHP 718
+ ++ TPK P VS KK K K K A P
Sbjct: 171 SKKRANETTPKAP--VSAKKAKVAVTPQKTDEKKKGGKAANQSP 212
>gi|242091631|ref|XP_002441648.1| hypothetical protein SORBIDRAFT_09g030950
[Sorghum bicolor]
Length = 307
Score = 168 bits (423), Expect = 1e-039
Identities = 98/224 (43%), Positives = 132/224 (58%), Gaps = 24/224 (10%)
Frame = +2
Query: 59 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLDKGKKGETALLYVTVDGKKLVMGTLSQGN 238
MEFWG+EV G +VK +P ++H+SQA+L + KK ++ L+YV VD +KL +GTLS
Sbjct: 1 MEFWGLEVKPGSTVKCEPGHGFILHLSQAALGESKKSDSVLMYVKVDDEKLAIGTLSIDK 60
Query: 239 IPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNMPEDEEDFSDSEEEEEEAAAVPATAV 418
PQI DLVF+KEFELSH+ ++ SV GYK E++E DSE+EEEE VP
Sbjct: 61 NPQIQCDLVFDKEFELSHTSKTTSVFLTGYKVEQPTEEDEMDLDSEDEEEEELNVPVIKE 120
Query: 419 TVKADSKPKAKPAEEV------------------KPESDDDDDEDEEEDDSEEDGSDSEK 544
KA+ K K K E+ K E D D+DE ++ D E D SD +
Sbjct: 121 NGKAEGKEKQKSQEKAVSAASKSSLASRLVGKKSKDEDDSDEDETDDSDVDETDDSDEGE 180
Query: 545 GM---DVDEDDSEDEEDDSE-DEDDETPKKPEVVSNKKRPNESA 664
G+ + D+DDS DE+D SE +E+ TPKKPE + KKR E+A
Sbjct: 181 GLSPEEGDDDDSSDEDDTSEGEEETPTPKKPE--AGKKRAAENA 222
>gi|255573038|ref|XP_002527449.1| Histone deacetylase 2a, putative [Ricinus
communis]
Length = 310
Score = 162 bits (409), Expect = 5e-038
Identities = 91/221 (41%), Positives = 138/221 (62%), Gaps = 9/221 (4%)
Frame = +2
Query: 59 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLDKGKK---GETALLYVTVDGKKLVMGTLS 229
MEFWGVE+ AG+++KV+P+ E+LIH+SQA+L + KK E+ LYV VD KK+++GTLS
Sbjct: 1 MEFWGVEIKAGETLKVEPNPESLIHLSQAALGESKKEKGNESVPLYVKVDNKKIILGTLS 60
Query: 230 QGNIPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNMPEDEEDFSDSEEEEEEAAAVPA 409
Q N PQI+FD+VFEKE ELSH+ ++GSV+ GY++P +PE+++ FS+ E ++EE +
Sbjct: 61 QENFPQIAFDIVFEKEVELSHNWKNGSVYLSGYQTP-LPEEDDMFSEEESDDEEPLPLVN 119
Query: 410 T---AVTVKADSKPKAKPAEEVKPESDDDDDEDEEEDDSEEDGSDSEKGMDVDEDDSEDE 580
+ + K AK + KPES + E+ SD + D D+DD +D+
Sbjct: 120 ADNGGIQLAGTQKAAAK-SNIAKPESSTKQKAKPVQPSKAEEASDDDDESDDDDDDEDDD 178
Query: 581 EDDSEDEDD-ETPKKPEVVSNKKRPNESAASKAAISAKKAK 700
ED+S+DED+ E + S+ + +ES + A K K
Sbjct: 179 EDESDDEDESEEGMSVDEDSDDEGDSESEDEETPKKADKGK 219
>gi|269969912|gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum]
Length = 295
Score = 161 bits (405), Expect = 1e-037
Identities = 97/233 (41%), Positives = 139/233 (59%), Gaps = 29/233 (12%)
Frame = +2
Query: 59 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLD--KGKKGETALLYVTVDGKKLVMGTLSQ 232
MEFWG EV +G+ + V+P ++H+SQASL K K ++ L V +DGKKLV+GTLS
Sbjct: 1 MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKAQSVCLSVNIDGKKLVLGTLSS 60
Query: 233 GNIPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNMPEDEEDFSDSEEEEEEAAAVPAT 412
+PQ FDLVF+++FELSH+ +SGSV+F GYK+ N E+EED D EEE +E +P
Sbjct: 61 DKVPQQQFDLVFDRDFELSHNWKSGSVYFFGYKATNPFEEEEDDEDDEEESDE--DIP-- 116
Query: 413 AVTVKADSKPKAKPAEE------------------VKPESDDDDDEDEEEDDSEEDGSDS 538
+T+ + KP+AK E V+P D D+++E D +E D
Sbjct: 117 -LTIANNGKPEAKVKEAEKSNVAKDSASGKQKVKIVEPSKDAKADDEDESTDEDEMSEDE 175
Query: 539 EKGMDVDEDDSEDEEDDSEDEDDETPKKPEVVSNKKRPNESAASKAAISAKKA 697
+ M ED+S D +D+S++ ++ETPKK E KKR +S A+K + KKA
Sbjct: 176 DSDMGEGEDES-DGDDESDEGEEETPKKAE--PGKKRKADS-ATKTPVPDKKA 224
>gi|73919938|sp|Q6V9I6.1|HDT1_SOLCH RecName: Full=Histone deacetylase HDT1;
AltName: Full=Histone deacetylase 2a; Short=HD2a; AltName: Full=ScHD2a
Length = 269
Score = 160 bits (404), Expect = 2e-037
Identities = 93/221 (42%), Positives = 133/221 (60%), Gaps = 13/221 (5%)
Frame = +2
Query: 59 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLD--KGKKGETALLYVTVDGKKLVMGTLSQ 232
MEFWG EV +G+ + V+P ++H+SQASL K K E+ L V +DGKKLV+GTL+
Sbjct: 1 MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKSESVCLSVNIDGKKLVLGTLNS 60
Query: 233 GNIPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNMPEDEEDFSDSEEEEEEAAAVPAT 412
+PQ FDLVF+++FELSH+L+SGSV+F GYK+ N E+EED D +E +E +P T
Sbjct: 61 EKVPQQQFDLVFDRDFELSHNLKSGSVYFFGYKATNPFEEEEDDEDDYDESDE--DIPLT 118
Query: 413 AVTVKADSKPKAKPAEEVKPESDDDDDEDEEEDDSEEDGSDSE-KGMDVDEDDSEDEEDD 589
+ K +P E K + D +++ E D E + D D+ D ++EDD
Sbjct: 119 LA-----NSGKPEPKEAGKSNAGKDSASGKQKVRIVEPTKDDEDESSDDDDSDMGEDEDD 173
Query: 590 SEDEDDETPKKPEVVSNKKRPNESAASKAAISAKKAKPATP 712
S+D ++ETPKK E KR +A+K ++ KKAK TP
Sbjct: 174 SDDSEEETPKKAEPA---KRRKADSATKTPVTDKKAKLTTP 211
>gi|269969914|gb|ACZ54946.1| type 2 histone deacetylase b [Nicotiana tabacum]
Length = 294
Score = 159 bits (402), Expect = 3e-037
Identities = 96/233 (41%), Positives = 140/233 (60%), Gaps = 28/233 (12%)
Frame = +2
Query: 59 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLDKGKKG--ETALLYVTVDGKKLVMGTLSQ 232
MEFWG EV +G+ + V+P ++H+SQASL + KK ++ L V +DGKKLV+GTL+
Sbjct: 1 MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKVQSVCLSVNIDGKKLVLGTLNS 60
Query: 233 GNIPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNMPEDEEDFSDSEEEEEEAAAVPAT 412
+PQ FDLVF+++FELSH+ ++GSV+F GYK+ N E+EED D EEE +E +P
Sbjct: 61 DKVPQQQFDLVFDRDFELSHNWKNGSVYFFGYKATNPFEEEEDDEDDEEESDE--DIP-- 116
Query: 413 AVTVKADSKPKAKPAEEVKP----------------ESDDDDDEDEEEDDSEEDGSDSEK 544
+T+ + KP+AK E K E D D+E++ ++ED ++
Sbjct: 117 -LTIANNGKPEAKVKEAEKSNAAKDSASGKQKVKIVEPSKDAKADDEDESTDEDEMSEDE 175
Query: 545 GMDVDE-DDSEDEEDDSEDEDDETPKKPEVVSNKKRPNESAASKAAISAKKAK 700
DV E +D DE+D+S++ ++ETPKK E KKR +SA A KKAK
Sbjct: 176 DSDVGEGEDESDEDDESDESEEETPKKAE--PGKKRKADSATKTPA--DKKAK 224
>gi|73919943|sp|Q9M4U4.1|HDT3_MAIZE RecName: Full=Histone deacetylase HDT3;
AltName: Full=Histone deacetylase 2c; Short=HD2c; AltName:
Full=Zm-HD2c
Length = 300
Score = 157 bits (396), Expect = 2e-036
Identities = 90/221 (40%), Positives = 131/221 (59%), Gaps = 8/221 (3%)
Frame = +2
Query: 59 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLDKGKKGETALLYVTVDGKKLVMGTLSQGN 238
MEFWG+EV G +VK +P + ++H+SQA+L + KK + AL+YV +D +KL +GTLS
Sbjct: 1 MEFWGLEVKPGSTVKCEPGYGFVLHLSQAALGESKKSDNALMYVKIDDQKLAIGTLSVDK 60
Query: 239 IPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNMPEDEEDFSDSEEEEEEAAAVPATAV 418
P I FDL+F+KEFELSH+ ++ SV F GYK E++E DSE+E+EE VPA
Sbjct: 61 NPHIQFDLIFDKEFELSHTSKTTSVFFTGYKVEQPFEEDEMDLDSEDEDEE-LNVPAVKE 119
Query: 419 TVKADSKPKAKPAEEV--KPESDDDDDEDEEEDDSEEDGSDSEKGMDVDEDDS----EDE 580
KAD K + + V +S D + +++DDS+ED +D + D+ D E+
Sbjct: 120 NGKADEKKQKSQEKAVAAPSKSSPDSKKSKDDDDSDEDETDDSDEDETDDSDEGLSPEEG 179
Query: 581 EDDSEDEDDETPKKPEVVSNKKRPNESAASKAAISAKKAKP 703
+DDS DEDD + + E K+P E +AA S+ P
Sbjct: 180 DDDSSDEDDTSDDEEEDTPTPKKP-EVGKKRAAESSVLKTP 219
>gi|162459285|ref|NP_001105402.1| histone deacetylase HDT1 [Zea mays]
Length = 307
Score = 157 bits (395), Expect = 2e-036
Identities = 88/218 (40%), Positives = 127/218 (58%), Gaps = 7/218 (3%)
Frame = +2
Query: 59 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLDKGKKGETALLYVTVDGKKLVMGTLSQGN 238
MEFWG+EV G +VK +P + ++H+SQA+L + KK + AL+YV +D +KL +GTLS
Sbjct: 1 MEFWGLEVKPGSTVKCEPGYGFVLHLSQAALGESKKSDNALMYVKIDDQKLAIGTLSVDK 60
Query: 239 IPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNMPEDEEDFSDSEEEEEEAAAVPATAV 418
P I FDL+F+KEFELSH+ ++ SV F GYK E++E DSE+E+EE VP
Sbjct: 61 NPHIQFDLIFDKEFELSHTSKTTSVFFTGYKVEQPFEEDEMDLDSEDEDEE-LNVPVVKE 119
Query: 419 TVKADSKPKAKPAEEV--KPESDDDDDEDEEEDDSEEDGSDSEKGMDVDEDD----SEDE 580
KAD K + + V +S D + +++DDS+ED +D + D+ D SE+
Sbjct: 120 NGKADEKKQKSQEKAVAAPSKSSPDSKKSKDDDDSDEDETDDSDEDETDDSDEGLSSEEG 179
Query: 581 EDDSEDEDDETPKKPEVVSNKKRPNESAASKAAISAKK 694
+DDS DEDD + + E K+P A S K
Sbjct: 180 DDDSSDEDDTSDDEEEDTPTPKKPEVGKKRPAESSVLK 217
>gi|195606718|gb|ACG25189.1| histone deacetylase 2b [Zea mays]
Length = 300
Score = 156 bits (392), Expect = 5e-036
Identities = 89/221 (40%), Positives = 130/221 (58%), Gaps = 8/221 (3%)
Frame = +2
Query: 59 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLDKGKKGETALLYVTVDGKKLVMGTLSQGN 238
MEFWG+EV G +VK +P + ++H+SQA+L + KK + AL+YV +D +KL +GTLS
Sbjct: 1 MEFWGLEVKPGSTVKCEPGYGFVLHLSQAALGESKKSDNALMYVKIDDQKLAIGTLSVDK 60
Query: 239 IPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNMPEDEEDFSDSEEEEEEAAAVPATAV 418
P I FDL+F+KEFELSH+ ++ SV F GYK E++E DSE+E+EE VP
Sbjct: 61 NPHIQFDLIFDKEFELSHTSKTTSVFFTGYKVEQPFEEDEMDLDSEDEDEE-LNVPVVKE 119
Query: 419 TVKADSKPKAKPAEEV--KPESDDDDDEDEEEDDSEEDGSDSEKGMDVDEDDS----EDE 580
KAD K + + V +S D + +++DDS+ED +D + D+ D E+
Sbjct: 120 NGKADEKKQKSQEKAVAAPSKSSPDSKKSKDDDDSDEDETDDSDEDETDDSDEGLSPEEG 179
Query: 581 EDDSEDEDDETPKKPEVVSNKKRPNESAASKAAISAKKAKP 703
+DDS DEDD + + E K+P E +AA S+ P
Sbjct: 180 DDDSSDEDDTSDDEEEDTPTPKKP-EVGKKRAAESSVLKTP 219
>gi|334185733|ref|NP_001190012.1| histone deacetylase HDT1 [Arabidopsis
thaliana]
Length = 242
Score = 152 bits (383), Expect = 5e-035
Identities = 96/217 (44%), Positives = 129/217 (59%), Gaps = 10/217 (4%)
Frame = +2
Query: 59 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLD--KGKKGETALLYVTVDGKKLVMGTLSQ 232
MEFWG+EV +GK V V P+ LIHVSQASL K KKGE L+V V + LV+GTLS
Sbjct: 1 MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLST 60
Query: 233 GNIPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNMPEDEEDFSDSEEEEEEAAAVPAT 412
NIPQ+ DLVF+KEFELSH+ GSV+FVGYK+PN+ E SEEEEEE A A
Sbjct: 61 ENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKTPNI----EPQGYSEEEEEEVPAGNAA 116
Query: 413 AVTVKADSKP-KAKPAEEVKPESDDDDDEDEEEDDSEEDGSDSEKGMDVDEDDSEDEEDD 589
K +KP + KPA V E D+ D + +EDDS+ + S+ E+ S+ ++
Sbjct: 117 KAVAKPKAKPAEVKPA--VDDEEDESDSDGMDEDDSDGEDSEEEEPTPKKPASSKKRANE 174
Query: 590 SEDEDDETPKKPEV-VSNKKRPNESAASKAAISAKKA 697
+ + + KK +V V+ +K + KAA + K+
Sbjct: 175 TTPKAPVSAKKAKVAVTPQKTDEKKKGGKAANQSPKS 211
>gi|81074563|gb|ABB55369.1| histone deacetylase 2a-like [Solanum tuberosum]
Length = 203
Score = 149 bits (376), Expect = 3e-034
Identities = 86/200 (43%), Positives = 122/200 (61%), Gaps = 12/200 (6%)
Frame = +2
Query: 59 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLD--KGKKGETALLYVTVDGKKLVMGTLSQ 232
MEFWG EV +G+ + V+P ++H+SQASL K K E+ L V +DGKKLV+GTL+
Sbjct: 1 MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKSESVCLSVNIDGKKLVLGTLNS 60
Query: 233 GNIPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNMPEDEEDFSDSEEEEEEAAAVPAT 412
+PQ FDLVF+++FELSH+L+SGSV+F GYK+ N E+EED D +E +E +P T
Sbjct: 61 EKVPQQQFDLVFDRDFELSHNLKSGSVYFFGYKATNPFEEEEDDEDDYDESDE--DIPLT 118
Query: 413 AVTVKADSKPKAKPAEEVKPESDDDDDEDEEEDDSEEDGSDSEKGMDVDEDDSE--DEED 586
+ K +P E K + D +++ E D E D+DDSE ++ED
Sbjct: 119 LA-----NSGKPEPKEAGKSNAGKDSASGKQKVRIVEPTKDDEDESS-DDDDSELGEDED 172
Query: 587 DSEDEDDETPKKPEVVSNKK 646
DS+D ++ETPKK E +K
Sbjct: 173 DSDDSEEETPKKAEPAKKRK 192
>gi|162463122|ref|NP_001105631.1| histone deacetylase HDT2 [Zea mays]
Length = 303
Score = 148 bits (371), Expect = 1e-033
Identities = 90/218 (41%), Positives = 121/218 (55%), Gaps = 9/218 (4%)
Frame = +2
Query: 59 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLDKGKKGETALLYVTVDGKKLVMGTLSQGN 238
MEFWG+EV G +VK +P ++HVSQA+L + KK ++AL+YV VD KKL +GTLS
Sbjct: 1 MEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKKSDSALMYVKVDDKKLAIGTLSIDK 60
Query: 239 IPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNMPEDEEDFSDSEEEEEEAAAVPATAV 418
PQI FDLVF KEFELSH+ ++ SV F GYK E +E DSE+EEEE +P
Sbjct: 61 YPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQPIEGDEMDLDSEDEEEE-LNIPVIKE 119
Query: 419 TVKADSKPKAKPAEEVKPESDDDDD---EDEEEDDSEEDGSDSEKGMDVDEDDSEDEEDD 589
KAD K + K E+ + E + +DDS D SD ++ D DEDDS+D ++
Sbjct: 120 NGKADGKEEQKNQEKAVAATASKSSLGLEKKSKDDS--DDSDEDESDDSDEDDSDDSDEG 177
Query: 590 ---SEDEDDETPKKPEVVSNKKRPNESAASKAAISAKK 694
S DE D+ + S+ K K+
Sbjct: 178 EGLSPDEGDDDSSDEDDTSDDDEEETPTPKKPEAGKKR 215
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,844,195,214,508
Number of Sequences: 15229318
Number of Extensions: 2844195214508
Number of Successful Extensions: 670869000
Number of sequences better than 0.0: 0
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