BLASTX 7.6.2
Query= UN23589 /QuerySize=717
(716 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G03590.1 | Symbols: | SWIB complex BAF60b dom... 214 6e-056
TAIR9_protein||AT2G35605.1 | Symbols: | SWIB complex BAF60b dom... 108 5e-024
TAIR9_protein||AT1G31760.1 | Symbols: | SWIB complex BAF60b dom... 105 4e-023
TAIR9_protein||AT4G34290.1 | Symbols: | SWIB complex BAF60b dom... 104 7e-023
TAIR9_protein||AT2G14880.1 | Symbols: | SWIB complex BAF60b dom... 102 2e-022
TAIR9_protein||AT3G19080.1 | Symbols: | SWIB complex BAF60b dom... 83 2e-016
TAIR9_protein||AT1G49520.1 | Symbols: | SWIB complex BAF60b dom... 71 7e-013
TAIR9_protein||AT4G26810.1 | Symbols: | SWIB complex BAF60b dom... 64 6e-011
TAIR9_protein||AT4G26810.2 | Symbols: | SWIB complex BAF60b dom... 64 6e-011
TAIR9_protein||AT4G22360.1 | Symbols: | SWIB complex BAF60b dom... 58 5e-009
TAIR9_protein||AT3G01890.1 | Symbols: | SWIB complex BAF60b dom... 48 5e-006
TAIR9_protein||AT5G14170.1 | Symbols: CHC1 | CHC1 | chr5:4568696... 47 8e-006
>TAIR9_protein||AT3G03590.1 | Symbols: | SWIB complex BAF60b domain-containing
protein | chr3:865341-866669 REVERSE
Length = 144
Score = 214 bits (543), Expect = 6e-056
Identities = 115/155 (74%), Positives = 124/155 (80%), Gaps = 16/155 (10%)
Frame = +1
Query: 70 MSSVAARVFRGCRSLLAPASRAAATSSLLSSSRSLTTITAGGTKKSAAKPKPKSKPDPPA 249
MSSVAA VFRG RSLLAPASR ATSSL+S AG TKK AAKPK K+KP P A
Sbjct: 1 MSSVAAMVFRGARSLLAPASR--ATSSLVS---------AGSTKKPAAKPKAKAKPKPKA 49
Query: 250 K-----KKTPRTTRIFKATPVSPTLAQFLGTGETTRTDAVKEVWTYVKSHDLQNPADKRE 414
K KKTPR+T IFK TPVSP LAQFLGTGET+RTDA+K +WTY+KSHDLQNPADKRE
Sbjct: 50 KSDSPAKKTPRSTGIFKVTPVSPVLAQFLGTGETSRTDAIKGIWTYIKSHDLQNPADKRE 109
Query: 415 IFCDEKLKQIFEGKDKVGFLEVTKLLSTHFVKTA* 519
IFCDE LK IFEGKDKVGFLE++KLLS HFVKTA*
Sbjct: 110 IFCDETLKLIFEGKDKVGFLEISKLLSPHFVKTA* 144
>TAIR9_protein||AT2G35605.1 | Symbols: | SWIB complex BAF60b domain-containing
protein | chr2:14946161-14947027 FORWARD
Length = 110
Score = 108 bits (268), Expect = 5e-024
Identities = 50/83 (60%), Positives = 62/83 (74%)
Frame = +1
Query: 271 TRIFKATPVSPTLAQFLGTGETTRTDAVKEVWTYVKSHDLQNPADKREIFCDEKLKQIFE 450
T I K PVS LA F+G E +RT AVK++W Y+K ++LQNP +KREI CDE+LK IF
Sbjct: 28 TGILKVVPVSKPLANFIGENEVSRTTAVKKIWEYIKLNNLQNPVNKREILCDEQLKTIFS 87
Query: 451 GKDKVGFLEVTKLLSTHFVKTA* 519
GKD VGFLE++KLLS HF K+A*
Sbjct: 88 GKDTVGFLEISKLLSQHFPKSA* 110
>TAIR9_protein||AT1G31760.1 | Symbols: | SWIB complex BAF60b domain-containing
protein | chr1:11372602-11373414 REVERSE
Length = 113
Score = 105 bits (260), Expect = 4e-023
Identities = 50/81 (61%), Positives = 59/81 (72%)
Frame = +1
Query: 277 IFKATPVSPTLAQFLGTGETTRTDAVKEVWTYVKSHDLQNPADKREIFCDEKLKQIFEGK 456
IFK PVS LA F G E TR A+K+VW YVK H+LQNPA+K+EI CD+KLK IF+GK
Sbjct: 33 IFKTRPVSQQLASFAGERELTRGSALKKVWEYVKLHNLQNPANKKEIHCDDKLKTIFDGK 92
Query: 457 DKVGFLEVTKLLSTHFVKTA* 519
DKVG E+ KLLS HF K+ *
Sbjct: 93 DKVGITEIMKLLSPHFPKSV* 113
>TAIR9_protein||AT4G34290.1 | Symbols: | SWIB complex BAF60b domain-containing
protein | chr4:16410883-16412122 FORWARD
Length = 145
Score = 104 bits (258), Expect = 7e-023
Identities = 55/127 (43%), Positives = 72/127 (56%), Gaps = 4/127 (3%)
Frame = +1
Query: 127 SRAAATSSLLSSSRSLTTITAGGTKKSAAKPKPKSKPDPPAKKKTPRTTRIFKATPVSPT 306
S + SSL S T + SAA + DP KT I K PVS
Sbjct: 22 SSMLSPSSLRLSPNHPTNLRMVRAVTSAA----AASSDPTTTTKTREPRGIMKPRPVSQA 77
Query: 307 LAQFLGTGETTRTDAVKEVWTYVKSHDLQNPADKREIFCDEKLKQIFEGKDKVGFLEVTK 486
+ +G E RT A+K +W Y+K HDLQ+P +KR+I CDEKLK+IFEGK++VGFLE+ K
Sbjct: 78 MQDVVGVPEIPRTQALKRIWAYIKEHDLQDPQNKRDILCDEKLKKIFEGKERVGFLEIAK 137
Query: 487 LLSTHFV 507
L+ HF+
Sbjct: 138 LIGPHFL 144
>TAIR9_protein||AT2G14880.1 | Symbols: | SWIB complex BAF60b domain-containing
protein | chr2:6393686-6394841 REVERSE
Length = 142
Score = 102 bits (254), Expect = 2e-022
Identities = 54/121 (44%), Positives = 71/121 (58%), Gaps = 2/121 (1%)
Frame = +1
Query: 145 SSLLSSSRSLTTITAGGTKKSAAKPKPKSKPDPPAKKKTPRTTRIFKATPVSPTLAQFLG 324
S+ LSS R + A A +S K+ PR I K PVSP + +
Sbjct: 23 STPLSSLRFASHPAAKLRLVRAVTSATESSEPTATNKRVPR--GIMKPRPVSPEMQDIVE 80
Query: 325 TGETTRTDAVKEVWTYVKSHDLQNPADKREIFCDEKLKQIFEGKDKVGFLEVTKLLSTHF 504
E RT A+K +W Y+K HDLQ+P +KREI CDEKLK+IFEG+D+VGFLE+ KL+ HF
Sbjct: 81 LPEIARTQALKRIWAYIKEHDLQDPQNKREILCDEKLKKIFEGRDRVGFLEIAKLIGPHF 140
Query: 505 V 507
+
Sbjct: 141 L 141
>TAIR9_protein||AT3G19080.1 | Symbols: | SWIB complex BAF60b domain-containing
protein | chr3:6596082-6598667 FORWARD
Length = 463
Score = 83 bits (203), Expect = 2e-016
Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Frame = +1
Query: 178 TITAGGTKKSAAKPKPKSKPDPPAKKKTPRTTRIFKATPVSPTLAQFLGTGET--TRTDA 351
++++ K K + + P +K + + P+S L +FLG GE +R D
Sbjct: 348 SVSSKSPKNGKQKMESDGDSEEPNEKDKKQKKEVLAPLPLSDALVKFLGDGENSLSRADV 407
Query: 352 VKEVWTYVKSHDLQNPADKREIFCDEKLKQIFEGKDKVGFLEVTKLLSTHFVK 510
VK +W Y+ +DLQ+P+DKR + CDEKLK++FE D V+KLL+ HF+K
Sbjct: 408 VKRLWEYINHNDLQDPSDKRRVICDEKLKELFE-VDSFEDTSVSKLLTNHFIK 459
>TAIR9_protein||AT1G49520.1 | Symbols: | SWIB complex BAF60b domain-containing
protein | chr1:18329736-18331691 FORWARD
Length = 373
Score = 71 bits (172), Expect = 7e-013
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Frame = +1
Query: 232 KPDPPAKKKTPRTTRIFKATPVSPTLAQFLGTGETTRTDAVKEVWTYVKSHDLQNPADKR 411
K + P K K R K +SP L +FLGT + RT+ VK++W Y++ HDLQ+P ++R
Sbjct: 88 KTELPVKAK-KRGGGFNKICQLSPQLEKFLGTSQLARTEVVKKMWAYIREHDLQDPTNRR 146
Query: 412 EIFCDEKLKQIFEGKDKVGFLEVTKLLSTH 501
I CDE L +F K + ++ K L+ H
Sbjct: 147 NILCDESLHSLFRVK-TINMFQMNKALAKH 175
>TAIR9_protein||AT4G26810.1 | Symbols: | SWIB complex BAF60b domain-containing
protein | chr4:13492247-13492649 REVERSE
Length = 107
Score = 64 bits (155), Expect = 6e-011
Identities = 27/69 (39%), Positives = 43/69 (62%)
Frame = +1
Query: 304 TLAQFLGTGETTRTDAVKEVWTYVKSHDLQNPADKREIFCDEKLKQIFEGKDKVGFLEVT 483
TL F+G + +R VW+Y+K+++LQ+P +K + CDEKLK I GK +V +++
Sbjct: 29 TLRNFVGQSQISRLGCFMRVWSYIKTNNLQDPKNKNVVICDEKLKSILLGKQRVELVDLP 88
Query: 484 KLLSTHFVK 510
L+ HF K
Sbjct: 89 SLIKLHFPK 97
>TAIR9_protein||AT4G26810.2 | Symbols: | SWIB complex BAF60b domain-containing
protein | chr4:13492247-13492649 REVERSE
Length = 107
Score = 64 bits (155), Expect = 6e-011
Identities = 27/69 (39%), Positives = 43/69 (62%)
Frame = +1
Query: 304 TLAQFLGTGETTRTDAVKEVWTYVKSHDLQNPADKREIFCDEKLKQIFEGKDKVGFLEVT 483
TL F+G + +R VW+Y+K+++LQ+P +K + CDEKLK I GK +V +++
Sbjct: 29 TLRNFVGQSQISRLGCFMRVWSYIKTNNLQDPKNKNVVICDEKLKSILLGKQRVELVDLP 88
Query: 484 KLLSTHFVK 510
L+ HF K
Sbjct: 89 SLIKLHFPK 97
>TAIR9_protein||AT4G22360.1 | Symbols: | SWIB complex BAF60b domain-containing
protein | chr4:11807811-11809660 FORWARD
Length = 386
Score = 58 bits (139), Expect = 5e-009
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Frame = +1
Query: 187 AGGTKKSAAKPKPKSKPDPPAKKKTPRTTRIFKATPVSPTLAQFLGTGETTRTD--AVKE 360
+G KK+ + + K++ P +T I +S L +F GTGET D ++
Sbjct: 280 SGQAKKAKTEVETKTETTEPIS-----STAISSTVTLSEPLGKFFGTGETEMADEEIIRR 334
Query: 361 VWTYVKSHDLQNPADKREIFCDEKLKQIFEGKDKVGFLEVTKLLSTHFVKTA* 519
VW Y+K ++L++P + I CDEKL+ + G + + + + ++L H K +*
Sbjct: 335 VWEYIKLNNLEDPVNPMAIQCDEKLRDLL-GCESISAVGINEMLRRHMYKQS* 386
>TAIR9_protein||AT3G01890.1 | Symbols: | SWIB complex BAF60b domain-containing
protein | chr3:310332-311772 FORWARD
Length = 459
Score = 48 bits (113), Expect = 5e-006
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +1
Query: 298 SPTLAQFLGTGETTRTDAVKEVWTYVKSHDLQNPADKREIFCDEKLKQIFEGKDKVGFLE 477
SP L Q LG TR + +W YVK LQNP D CD L +F G++K+ F
Sbjct: 253 SPALMQVLGIEVDTRPRIIAAIWHYVKVRKLQNPNDPSFFNCDAALHSVF-GEEKMKFTM 311
Query: 478 VTKLLSTH 501
++ +S H
Sbjct: 312 LSHKISQH 319
>TAIR9_protein||AT5G14170.1 | Symbols: CHC1 | CHC1 | chr5:4568696-4570444
REVERSE
Length = 535
Score = 47 bits (111), Expect = 8e-006
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +1
Query: 295 VSPTLAQFLGTGETTRTDAVKEVWTYVKSHDLQNPADKREIFCDEKLKQIFEGKDKVGFL 474
+S L LG TR + +W YVK+ LQNP D CD L+++F G++K+ F
Sbjct: 321 LSTALMDVLGIEVETRPRIIAAIWHYVKARKLQNPNDPSFFNCDAALQKVF-GEEKLKFT 379
Query: 475 EVTKLLSTH 501
V++ +S H
Sbjct: 380 MVSQKISHH 388
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,186,182,936
Number of Sequences: 33410
Number of Extensions: 12186182936
Number of Successful Extensions: 391856999
Number of sequences better than 0.0: 0
|
