Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN23595


BLASTX 7.6.2

Query= UN23595 /QuerySize=562
        (561 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT3G49990.1 | Symbols:  | FUNCTIONS IN: molecular...    247   3e-066

>TAIR9_protein||AT3G49990.1 | Symbols:  | FUNCTIONS IN: molecular_function
        unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
        cellular_component unknown; EXPRESSED IN: 23 plant structures;
        EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Low
        temperature viability protein (InterPro:IPR007307); Has 1404 Blast hits
        to 1163 proteins in 173 species: Archae - 5; Bacteria - 61; Metazoa -
        489; Fungi - 146; Plants - 69; Viruses - 17; Other Eukaryotes - 617
        (source: NCBI BLink). | chr3:18532492-18534000 REVERSE

          Length = 503

 Score =  247 bits (630), Expect = 3e-066
 Identities = 132/171 (77%), Positives = 142/171 (83%), Gaps = 19/171 (11%)
 Frame = +2

Query:  68 MGKKKFIDKKKAATFELCPRDTSDPLYSDAPGGDKIFLRVDQNPVNINGFTE-------D 226
           MGKKKFIDKKKAATFELCPRDTSDP YSDAPGGDKIFLRVDQNPVNINGF E       D
Sbjct:   1 MGKKKFIDKKKAATFELCPRDTSDPRYSDAPGGDKIFLRVDQNPVNINGFIEEDEEEEGD 60

Query: 227 NSQFDDAPEEGGEEDLAYGYSSFAGSSSSNNNPLPAHVRKEILELGYPDDGYNYLDHLRE 406
           +S+FDDAPEE     + YGYSSF  SSSS    LPAHVRKEILELGYPDDGYNYL+HLRE
Sbjct:  61 SSRFDDAPEE-----MDYGYSSFGDSSSS----LPAHVRKEILELGYPDDGYNYLEHLRE 111

Query: 407 IKNTGGGSNFYSNPKFEGEFLPRDDVKAYDASRVKVSGVVVEDGGGDDDKL 559
           IKNTGGGSNFY NPK+E   LPR DVKAYDASRVK+SG+V E+  G+D+KL
Sbjct: 112 IKNTGGGSNFYVNPKYEVAQLPR-DVKAYDASRVKISGMVNEE--GNDNKL 159

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,186,182,936
Number of Sequences: 33410
Number of Extensions: 12186182936
Number of Successful Extensions: 391856999
Number of sequences better than 0.0: 0