BLASTX 7.6.2
Query= UN23597 /QuerySize=876
(875 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|22329903|ref|NP_174527.2| pre-mRNA-splicing factor ATP-depend... 351 1e-094
gi|334182986|ref|NP_001185127.1| pre-mRNA-splicing factor ATP-de... 351 1e-094
gi|8920625|gb|AAF81347.1|AC007767_27 Strong similarity to an unk... 345 6e-093
gi|110741835|dbj|BAE98860.1| putative pre-mRNA splicing factor R... 303 3e-080
gi|145360634|ref|NP_181077.3| helicase domain-containing protein... 303 3e-080
gi|297823327|ref|XP_002879546.1| hypothetical protein ARALYDRAFT... 295 6e-078
gi|225457283|ref|XP_002284415.1| PREDICTED: similar to EMB2733/E... 267 2e-069
gi|297733904|emb|CBI15151.3| unnamed protein product [Vitis vini... 267 2e-069
gi|255563421|ref|XP_002522713.1| ATP-dependent RNA helicase, put... 239 5e-061
gi|38424010|dbj|BAD01767.1| RNA helicase-like [Oryza sativa Japo... 210 3e-052
gi|218200972|gb|EEC83399.1| hypothetical protein OsI_28838 [Oryz... 210 3e-052
gi|242056951|ref|XP_002457621.1| hypothetical protein SORBIDRAFT... 208 1e-051
gi|326489737|dbj|BAK01849.1| predicted protein [Hordeum vulgare ... 193 3e-047
gi|242065364|ref|XP_002453971.1| hypothetical protein SORBIDRAFT... 177 2e-042
gi|3608155|gb|AAC36188.1| putative pre-mRNA splicing factor RNA ... 133 5e-029
>gi|22329903|ref|NP_174527.2| pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16 [Arabidopsis thaliana]
Length = 1044
Score = 351 bits (898), Expect = 1e-094
Identities = 185/228 (81%), Positives = 204/228 (89%), Gaps = 2/228 (0%)
Frame = -2
Query: 685 MGSNDLRTWVSDKLMVLLGYSDKSVVSYLIKMAIESKSPAEIVGVLVDYGIASSGDTRSF 506
M SNDL+TWVSDKLM+LLGYS +VV+YLI MA ++KSP E+VG LVDYG +SSGDTRSF
Sbjct: 1 MASNDLKTWVSDKLMMLLGYSQAAVVNYLIAMAKKTKSPTELVGELVDYGFSSSGDTRSF 60
Query: 505 AEEIFARVPHKTAGVNLYQQREAEAAMLVRKQQTYTLIDDDDDDEDEVVKEKKPSASESR 326
AEEIFARVP KTAGVNLYQ+ EAEAAMLVRKQ+TY L+ D DDDEDEVV EKK S SESR
Sbjct: 61 AEEIFARVPRKTAGVNLYQKHEAEAAMLVRKQKTYALL-DADDDEDEVVVEKKSSVSESR 119
Query: 325 KSDKAKKRFRKKSGQSDDSDEEVPVREESRNVRRKVSEDEDDGSESEEERVRDQKEREEL 146
KSDK KKRFRKKSGQSD+SD EV VRE+SR+VRRKVSE EDDGSESEEERVRDQKEREEL
Sbjct: 120 KSDKGKKRFRKKSGQSDESDGEVAVREDSRHVRRKVSE-EDDGSESEEERVRDQKEREEL 178
Query: 145 EQHLRDRDTARTRKLTEQKLSKKEQEEALRREDAFKKDDLQSLRKVSR 2
EQHL+DRDTARTRKLTEQ LSKKE+EEA+RR +A +KDDL SLRKVSR
Sbjct: 179 EQHLKDRDTARTRKLTEQTLSKKEKEEAVRRANALEKDDLYSLRKVSR 226
>gi|334182986|ref|NP_001185127.1| pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16 [Arabidopsis thaliana]
Length = 1034
Score = 351 bits (898), Expect = 1e-094
Identities = 185/228 (81%), Positives = 204/228 (89%), Gaps = 2/228 (0%)
Frame = -2
Query: 685 MGSNDLRTWVSDKLMVLLGYSDKSVVSYLIKMAIESKSPAEIVGVLVDYGIASSGDTRSF 506
M SNDL+TWVSDKLM+LLGYS +VV+YLI MA ++KSP E+VG LVDYG +SSGDTRSF
Sbjct: 1 MASNDLKTWVSDKLMMLLGYSQAAVVNYLIAMAKKTKSPTELVGELVDYGFSSSGDTRSF 60
Query: 505 AEEIFARVPHKTAGVNLYQQREAEAAMLVRKQQTYTLIDDDDDDEDEVVKEKKPSASESR 326
AEEIFARVP KTAGVNLYQ+ EAEAAMLVRKQ+TY L+ D DDDEDEVV EKK S SESR
Sbjct: 61 AEEIFARVPRKTAGVNLYQKHEAEAAMLVRKQKTYALL-DADDDEDEVVVEKKSSVSESR 119
Query: 325 KSDKAKKRFRKKSGQSDDSDEEVPVREESRNVRRKVSEDEDDGSESEEERVRDQKEREEL 146
KSDK KKRFRKKSGQSD+SD EV VRE+SR+VRRKVSE EDDGSESEEERVRDQKEREEL
Sbjct: 120 KSDKGKKRFRKKSGQSDESDGEVAVREDSRHVRRKVSE-EDDGSESEEERVRDQKEREEL 178
Query: 145 EQHLRDRDTARTRKLTEQKLSKKEQEEALRREDAFKKDDLQSLRKVSR 2
EQHL+DRDTARTRKLTEQ LSKKE+EEA+RR +A +KDDL SLRKVSR
Sbjct: 179 EQHLKDRDTARTRKLTEQTLSKKEKEEAVRRANALEKDDLYSLRKVSR 226
>gi|8920625|gb|AAF81347.1|AC007767_27 Strong similarity to an unknown pre-mRNA
splicing factor RNA helicase At2g35340 gi|3608155 from Arabidopsis
thaliana BAC T32F12 gb|AC005314. ESTs gb|AV566249 and gb|AI998735 come
from this gene
Length = 1090
Score = 345 bits (884), Expect = 6e-093
Identities = 183/232 (78%), Positives = 204/232 (87%), Gaps = 6/232 (2%)
Frame = -2
Query: 685 MGSNDLRTWVSDKLMVLLGYSDKSVVSYLIKMAIESKSPAEIVGVLVDYGIASSGDTRSF 506
M SNDL+TWVSDKLM+LLGYS +VV+YLI MA ++KSP E+VG LVDYG +SSGDTRSF
Sbjct: 1 MASNDLKTWVSDKLMMLLGYSQAAVVNYLIAMAKKTKSPTELVGELVDYGFSSSGDTRSF 60
Query: 505 AEEIFARVPHKTAGVNLYQQREAEAAMLVRKQQTYTLIDDDDDDEDEVVKEKKPSASESR 326
AEEIFARVP KTAGVNLYQ+ EAEAAMLVRKQ+TY L+ D DDDEDEVV EKK S SESR
Sbjct: 61 AEEIFARVPRKTAGVNLYQKHEAEAAMLVRKQKTYALL-DADDDEDEVVVEKKSSVSESR 119
Query: 325 KSDKAKKRFRKKSGQSDDSDEEVPV----REESRNVRRKVSEDEDDGSESEEERVRDQKE 158
KSDK KKRFRKKSGQSD+SD E+P+ E+SR+VRRKVSE EDDGSESEEERVRDQKE
Sbjct: 120 KSDKGKKRFRKKSGQSDESDGEIPISFFLNEDSRHVRRKVSE-EDDGSESEEERVRDQKE 178
Query: 157 REELEQHLRDRDTARTRKLTEQKLSKKEQEEALRREDAFKKDDLQSLRKVSR 2
REELEQHL+DRDTARTRKLTEQ LSKKE+EEA+RR +A +KDDL SLRKVSR
Sbjct: 179 REELEQHLKDRDTARTRKLTEQTLSKKEKEEAVRRANALEKDDLYSLRKVSR 230
>gi|110741835|dbj|BAE98860.1| putative pre-mRNA splicing factor RNA helicase
[Arabidopsis thaliana]
Length = 1044
Score = 303 bits (774), Expect = 3e-080
Identities = 160/229 (69%), Positives = 191/229 (83%), Gaps = 5/229 (2%)
Frame = -2
Query: 685 MGSNDLRTWVSDKLMVLLGYSDKSVVSYLIKMAIESKSPAEIVGVLVDYGIASSGDTRSF 506
MGSNDL TWVSDKLMVLLG+S +VV YLI MA +SKSP E+V LV+ G + SGDTR+F
Sbjct: 1 MGSNDLNTWVSDKLMVLLGFSQTAVVQYLIAMAKQSKSPGELVRELVECGFSLSGDTRAF 60
Query: 505 AEEIFARVPHKTAGVNLYQQREAEAAMLVRKQQTYTLID-DDDDDEDEVVKEKKPSASES 329
AEEI+AR P KT GVNLYQQ+EAEAAML++KQ+T++L++ D D+DE+ V KK SAS++
Sbjct: 61 AEEIYARAPRKTPGVNLYQQQEAEAAMLLKKQKTFSLLEADHDEDENNV---KKQSASKT 117
Query: 328 RKSDKAKKRFRKKSGQ-SDDSDEEVPVREESRNVRRKVSEDEDDGSESEEERVRDQKERE 152
KSDK +KRFRKKS Q DD DE V VRE+ RNVRRKVSEDEDDG+ESEEER+RDQ+ERE
Sbjct: 118 GKSDKGQKRFRKKSEQLEDDDDEVVIVREDKRNVRRKVSEDEDDGTESEEERLRDQRERE 177
Query: 151 ELEQHLRDRDTARTRKLTEQKLSKKEQEEALRREDAFKKDDLQSLRKVS 5
ELEQHLR+RDTARTRKLTE K+SKKEQEE +RR+ A K D++SLRK S
Sbjct: 178 ELEQHLRERDTARTRKLTEPKMSKKEQEEFVRRDSAVDKGDIESLRKFS 226
>gi|145360634|ref|NP_181077.3| helicase domain-containing protein [Arabidopsis
thaliana]
Length = 1044
Score = 303 bits (774), Expect = 3e-080
Identities = 160/229 (69%), Positives = 191/229 (83%), Gaps = 5/229 (2%)
Frame = -2
Query: 685 MGSNDLRTWVSDKLMVLLGYSDKSVVSYLIKMAIESKSPAEIVGVLVDYGIASSGDTRSF 506
MGSNDL TWVSDKLMVLLG+S +VV YLI MA +SKSP E+V LV+ G + SGDTR+F
Sbjct: 1 MGSNDLNTWVSDKLMVLLGFSQTAVVQYLIAMAKQSKSPGELVRELVECGFSLSGDTRAF 60
Query: 505 AEEIFARVPHKTAGVNLYQQREAEAAMLVRKQQTYTLID-DDDDDEDEVVKEKKPSASES 329
AEEI+AR P KT GVNLYQQ+EAEAAML++KQ+T++L++ D D+DE+ V KK SAS++
Sbjct: 61 AEEIYARAPRKTPGVNLYQQQEAEAAMLLKKQKTFSLLEADHDEDENNV---KKQSASKT 117
Query: 328 RKSDKAKKRFRKKSGQ-SDDSDEEVPVREESRNVRRKVSEDEDDGSESEEERVRDQKERE 152
KSDK +KRFRKKS Q DD DE V VRE+ RNVRRKVSEDEDDG+ESEEER+RDQ+ERE
Sbjct: 118 GKSDKGQKRFRKKSEQLEDDDDEVVIVREDKRNVRRKVSEDEDDGTESEEERLRDQRERE 177
Query: 151 ELEQHLRDRDTARTRKLTEQKLSKKEQEEALRREDAFKKDDLQSLRKVS 5
ELEQHLR+RDTARTRKLTE K+SKKEQEE +RR+ A K D++SLRK S
Sbjct: 178 ELEQHLRERDTARTRKLTEPKMSKKEQEEFVRRDSAVDKGDIESLRKFS 226
>gi|297823327|ref|XP_002879546.1| hypothetical protein ARALYDRAFT_345267
[Arabidopsis lyrata subsp. lyrata]
Length = 1025
Score = 295 bits (755), Expect = 6e-078
Identities = 154/231 (66%), Positives = 191/231 (82%), Gaps = 5/231 (2%)
Frame = -2
Query: 685 MGSNDLRTWVSDKLMVLLGYSDKSVVSYLIKMAIESKSPAEIVGVLVDYGIASSGDTRSF 506
MGSNDL TWVSDKLMVLLG+S +VV YLI MA +SKSP E+V LVDYG + SGDTR+F
Sbjct: 1 MGSNDLNTWVSDKLMVLLGFSQTAVVQYLIAMAKKSKSPDELVRELVDYGFSLSGDTRAF 60
Query: 505 AEEIFARVPHKTAGVNLYQQREAEAAMLVRKQQTYTLIDDDDDDEDEVVKEKKPSASESR 326
AEEI+AR P KTAGVNLYQQ+EAEAAML++KQ+T++L++ D D+++ V +K SA E+
Sbjct: 61 AEEIYARAPRKTAGVNLYQQQEAEAAMLLKKQKTFSLLEADRDEDEGYV--EKQSALETG 118
Query: 325 KSDKAKKRFRKKSGQSDDSDEE---VPVREESRNVRRKVSEDEDDGSESEEERVRDQKER 155
KSDK++KRFRKK Q +D D++ + V+E+ RNVR KVSE EDDG+ESEEER+RDQ+ER
Sbjct: 119 KSDKSRKRFRKKIEQLEDDDDDEANLIVKEDKRNVRSKVSEGEDDGTESEEERLRDQRER 178
Query: 154 EELEQHLRDRDTARTRKLTEQKLSKKEQEEALRREDAFKKDDLQSLRKVSR 2
EELEQHLR+RDTARTRKLTE K+SKKEQEE +RR+ A +K D+ SLRK SR
Sbjct: 179 EELEQHLRERDTARTRKLTEPKMSKKEQEEFVRRDSAVEKGDIVSLRKFSR 229
>gi|225457283|ref|XP_002284415.1| PREDICTED: similar to EMB2733/ESP3 (EMBRYO
DEFECTIVE 2733); ATP-dependent RNA helicase [Vitis vinifera]
Length = 1056
Score = 267 bits (681), Expect = 2e-069
Identities = 137/237 (57%), Positives = 190/237 (80%), Gaps = 9/237 (3%)
Frame = -2
Query: 685 MGS-NDLRTWVSDKLMVLLGYSDKSVVSYLIKMAIESKSPAEIVGVLVDYGIASSGDTRS 509
MGS ++L+ WVSDKLM LLGYS ++V Y++ +A ++ SPA++VG LV++G+++S +TRS
Sbjct: 1 MGSESNLKVWVSDKLMSLLGYSQPTLVQYVVGLAKQASSPADVVGKLVEFGLSASSETRS 60
Query: 508 FAEEIFARVPHKTAGVNLYQQREAEAAMLVRKQQTYTLIDDDDDDED--EVVKEKK---- 347
FAEEIF++VPHK +G+N+YQ++E EAAMLVRKQ+TY ++D DD DED +V +
Sbjct: 61 FAEEIFSKVPHKASGLNVYQKQEREAAMLVRKQKTYAILDADDSDEDGGGIVDNRSSTAA 120
Query: 346 PSASESRKSDKAKKRFRKKS-GQSDDSDEEVPVR-EESRNVRRKVSEDEDDGSESEEERV 173
P+AS+S K+D KKRFRKK+ DD+D+EV R EESR V+R+ S+DEDD SE EEE +
Sbjct: 121 PAASQSEKADTHKKRFRKKTENVEDDADDEVIARAEESRQVKRRTSQDEDDDSELEEESL 180
Query: 172 RDQKEREELEQHLRDRDTARTRKLTEQKLSKKEQEEALRREDAFKKDDLQSLRKVSR 2
RD++ERE+LEQ++R RD A TRKLTEQKLS+KE+EEA+RR +A ++DD+ +LRKVSR
Sbjct: 181 RDRREREQLEQNIRQRDAAGTRKLTEQKLSRKEEEEAIRRSNAMEEDDISALRKVSR 237
>gi|297733904|emb|CBI15151.3| unnamed protein product [Vitis vinifera]
Length = 954
Score = 267 bits (681), Expect = 2e-069
Identities = 137/237 (57%), Positives = 190/237 (80%), Gaps = 9/237 (3%)
Frame = -2
Query: 685 MGS-NDLRTWVSDKLMVLLGYSDKSVVSYLIKMAIESKSPAEIVGVLVDYGIASSGDTRS 509
MGS ++L+ WVSDKLM LLGYS ++V Y++ +A ++ SPA++VG LV++G+++S +TRS
Sbjct: 1 MGSESNLKVWVSDKLMSLLGYSQPTLVQYVVGLAKQASSPADVVGKLVEFGLSASSETRS 60
Query: 508 FAEEIFARVPHKTAGVNLYQQREAEAAMLVRKQQTYTLIDDDDDDED--EVVKEKK---- 347
FAEEIF++VPHK +G+N+YQ++E EAAMLVRKQ+TY ++D DD DED +V +
Sbjct: 61 FAEEIFSKVPHKASGLNVYQKQEREAAMLVRKQKTYAILDADDSDEDGGGIVDNRSSTAA 120
Query: 346 PSASESRKSDKAKKRFRKKS-GQSDDSDEEVPVR-EESRNVRRKVSEDEDDGSESEEERV 173
P+AS+S K+D KKRFRKK+ DD+D+EV R EESR V+R+ S+DEDD SE EEE +
Sbjct: 121 PAASQSEKADTHKKRFRKKTENVEDDADDEVIARAEESRQVKRRTSQDEDDDSELEEESL 180
Query: 172 RDQKEREELEQHLRDRDTARTRKLTEQKLSKKEQEEALRREDAFKKDDLQSLRKVSR 2
RD++ERE+LEQ++R RD A TRKLTEQKLS+KE+EEA+RR +A ++DD+ +LRKVSR
Sbjct: 181 RDRREREQLEQNIRQRDAAGTRKLTEQKLSRKEEEEAIRRSNAMEEDDISALRKVSR 237
>gi|255563421|ref|XP_002522713.1| ATP-dependent RNA helicase, putative [Ricinus
communis]
Length = 756
Score = 239 bits (609), Expect = 5e-061
Identities = 124/237 (52%), Positives = 176/237 (74%), Gaps = 10/237 (4%)
Frame = -2
Query: 685 MGSNDLRTWVSDKLMVLLGYSDKSVVSYLIKMAIESKSPAEIVGVLVDYGIASSGDTRSF 506
MG +DL+TWVSDKLM +LGYS +VV Y+I ++ ++ SPA++ L ++G ++S +TRSF
Sbjct: 1 MGDSDLKTWVSDKLMSILGYSQSTVVQYIIGISKQANSPADVQAKLSEFGFSTSAETRSF 60
Query: 505 AEEIFARVPHKTAGVNLYQQREAEAAMLVRKQQTYTLIDDDDDDE----DEVVKEKKPS- 341
+EE+F+RVP K +G+N+YQ++E EAAML RKQ TYTL+D DDDD+ D + S
Sbjct: 61 SEELFSRVPRKQSGLNIYQKQEREAAMLARKQLTYTLLDADDDDDANGSDASAYGNQSST 120
Query: 340 --ASESRKSDKAKKRFRKKSGQSDDSDEEV--PVREESRNVRRKVSEDEDDGSESEEERV 173
E +++ KKRFRKK +D D+E+ PV E+ R V+R++S+DE+D SESEEER+
Sbjct: 121 ITGFEPGRAESHKKRFRKKIESEEDEDKELVSPV-EKERQVKRRISQDEEDDSESEEERL 179
Query: 172 RDQKEREELEQHLRDRDTARTRKLTEQKLSKKEQEEALRREDAFKKDDLQSLRKVSR 2
+DQ+ERE+LE++LR+RD A TRKLTE K+SKKE EEA+RR ++D + +LRKVSR
Sbjct: 180 QDQREREQLERNLRERDAAGTRKLTEPKISKKEAEEAVRRSHVLEEDGIGTLRKVSR 236
>gi|38424010|dbj|BAD01767.1| RNA helicase-like [Oryza sativa Japonica Group]
Length = 1066
Score = 210 bits (533), Expect = 3e-052
Identities = 110/225 (48%), Positives = 160/225 (71%), Gaps = 8/225 (3%)
Frame = -2
Query: 670 LRTWVSDKLMVLLGYSDKSVVSYLIKMAIESKSPAEIVGVLVDYGIASSGDTRSFAEEIF 491
LR WVSDKLM LLGYS VV Y+I++A E S ++VG LV++G SS +TRSFA +I+
Sbjct: 7 LRDWVSDKLMSLLGYSKSVVVQYVIRLAKECSSTGDLVGKLVEFGFTSSAETRSFAADIY 66
Query: 490 ARVPHKTAGVNLYQQREAEAAMLVRKQQTYTLIDDDDDDEDEVVKEKKPSASESRKSDKA 311
A+VP K +G++ YQ++E EAA LV+KQ TY L+ D++D++ E + +S S S K+
Sbjct: 67 AKVPRKASGISNYQKQEREAAKLVKKQSTYKLLADEEDNDAETITSTSRQSSAS-TSSKS 125
Query: 310 KKRFRKKSGQSDD--SDEEVPVREES-RNVRRKVSE--DEDDGSES--EEERVRDQKERE 152
+K FR+K+ DD D+E ++++S RNV+R+ E DEDDG+++ E+ER+RDQ+ER
Sbjct: 126 RKHFRRKAEDQDDGNDDDETKIKQDSGRNVKRRTEEVDDEDDGNDTDEEQERIRDQQERA 185
Query: 151 ELEQHLRDRDTARTRKLTEQKLSKKEQEEALRREDAFKKDDLQSL 17
+LE+++R+RD A TRKL E++LSK+EQEE RR A K+D L
Sbjct: 186 QLEKNMRERDAANTRKLMERQLSKEEQEEITRRSQAMDKNDTSDL 230
>gi|218200972|gb|EEC83399.1| hypothetical protein OsI_28838 [Oryza sativa Indica
Group]
Length = 1046
Score = 210 bits (533), Expect = 3e-052
Identities = 110/225 (48%), Positives = 160/225 (71%), Gaps = 8/225 (3%)
Frame = -2
Query: 670 LRTWVSDKLMVLLGYSDKSVVSYLIKMAIESKSPAEIVGVLVDYGIASSGDTRSFAEEIF 491
LR WVSDKLM LLGYS VV Y+I++A E S ++VG LV++G SS +TRSFA +I+
Sbjct: 7 LRDWVSDKLMSLLGYSKSVVVQYVIRLAKECSSTGDLVGKLVEFGFTSSAETRSFAADIY 66
Query: 490 ARVPHKTAGVNLYQQREAEAAMLVRKQQTYTLIDDDDDDEDEVVKEKKPSASESRKSDKA 311
A+VP K +G++ YQ++E EAA LV+KQ TY L+ D++D++ E + +S S S K+
Sbjct: 67 AKVPRKASGISNYQKQEREAAKLVKKQSTYKLLADEEDNDAETITSTSRQSSAS-TSSKS 125
Query: 310 KKRFRKKSGQSDD--SDEEVPVREES-RNVRRKVSE--DEDDGSES--EEERVRDQKERE 152
+K FR+K+ DD D+E ++++S RNV+R+ E DEDDG+++ E+ER+RDQ+ER
Sbjct: 126 RKHFRRKAEDQDDGNDDDETKIKQDSGRNVKRRTEEVDDEDDGNDTDEEQERIRDQQERA 185
Query: 151 ELEQHLRDRDTARTRKLTEQKLSKKEQEEALRREDAFKKDDLQSL 17
+LE+++R+RD A TRKL E++LSK+EQEE RR A K+D L
Sbjct: 186 QLEKNMRERDAANTRKLMERQLSKEEQEEITRRSQAMDKNDTSDL 230
>gi|242056951|ref|XP_002457621.1| hypothetical protein SORBIDRAFT_03g010540
[Sorghum bicolor]
Length = 1046
Score = 208 bits (528), Expect = 1e-051
Identities = 105/229 (45%), Positives = 160/229 (69%), Gaps = 11/229 (4%)
Frame = -2
Query: 670 LRTWVSDKLMVLLGYSDKSVVSYLIKMAIESKSPAEIVGVLVDYGIASSGDTRSFAEEIF 491
LR WVSDKLM LLGYS VV Y+I++A E S ++VG LV++G SS +TR+FA +++
Sbjct: 7 LREWVSDKLMSLLGYSKNVVVQYVIRLAKECSSTGDLVGKLVEFGFTSSAETRAFASDVY 66
Query: 490 ARVPHKTAGVNLYQQREAEAAMLVRKQQTYTLIDDDDDDEDEVVKEKKPSASESRK--SD 317
A+VP + +G++ YQ++E EAA L +KQ TY L+ ++DDD D + P++ ++ + S
Sbjct: 67 AKVPRRASGISNYQKQEREAAKLAQKQSTYKLLANEDDDTD----NQTPTSQKTSRNPSS 122
Query: 316 KAKKRFRKKSGQSDDSDEEVPVREESRNVRRKVSEDE----DDGSESEEERVRDQKEREE 149
K++K FR+K+ Q D D+E+ ++ RNVR++ E++ D S+ E+ER+RDQ+E+ +
Sbjct: 123 KSRKHFRRKADQ-DSGDDEIVAKDSGRNVRQRTEEEDEESGDGSSDEEKERIRDQQEKAQ 181
Query: 148 LEQHLRDRDTARTRKLTEQKLSKKEQEEALRREDAFKKDDLQSLRKVSR 2
LE+++R+RD A TRKL E++LSK+EQEE RR A K+D LRK SR
Sbjct: 182 LERNMRERDAANTRKLMERQLSKEEQEELTRRSQAMDKNDTSDLRKFSR 230
>gi|326489737|dbj|BAK01849.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 1046
Score = 193 bits (490), Expect = 3e-047
Identities = 104/229 (45%), Positives = 148/229 (64%), Gaps = 11/229 (4%)
Frame = -2
Query: 670 LRTWVSDKLMVLLGYSDKSVVSYLIKMAIESKSPAEIVGVLVDYGIASSGDTRSFAEEIF 491
LR WVSDKLM + G+S +V Y+I +A + S ++VG LVDYG +SS +T SFA +I+
Sbjct: 7 LRDWVSDKLMSIQGFSTSVLVHYVIGLAKDCSSSGDLVGKLVDYGFSSSAETTSFAADIY 66
Query: 490 ARVPHKTAGVNLYQQREAEAAMLVRKQQTYTLIDDDDDDEDEVVKEKKPSASESRKSDKA 311
A+VP K ++ YQ++E +AA LV+KQ TY L+ DDDDDE + + S + S K+
Sbjct: 67 AKVPRKGKSISNYQKQERDAAKLVKKQSTYKLLADDDDDEID-----NHTTSSASASSKS 121
Query: 310 KKRFRKKSGQSDD--SDEEVPVREESRNVRRKV----SEDEDDGSESEEERVRDQKEREE 149
+K FR+K+ DD D+E R+VRR+ ED DD + E+E +RDQ+ER +
Sbjct: 122 RKHFRRKTQDQDDGKDDDETAAHISERSVRRRTGEVDDEDGDDTLDEEQEILRDQQERAQ 181
Query: 148 LEQHLRDRDTARTRKLTEQKLSKKEQEEALRREDAFKKDDLQSLRKVSR 2
LE+++R+RD TRKL E++LSK+EQEE RR A +K+D LR SR
Sbjct: 182 LEKNMRERDAVHTRKLMERQLSKEEQEELTRRSQALEKNDTSDLRDFSR 230
>gi|242065364|ref|XP_002453971.1| hypothetical protein SORBIDRAFT_04g022460
[Sorghum bicolor]
Length = 1088
Score = 177 bits (448), Expect = 2e-042
Identities = 86/193 (44%), Positives = 136/193 (70%), Gaps = 7/193 (3%)
Frame = -2
Query: 670 LRTWVSDKLMVLLGYSDKSVVSYLIKMAIESKSPAEIVGVLVDYGIASSGDTRSFAEEIF 491
LR WVSDKLM LLGYS VV Y+I++A E S ++V LV++G SS +TR+FA +++
Sbjct: 7 LREWVSDKLMSLLGYSKNVVVQYVIRLAKECSSTGDLVSKLVEFGFTSSAETRTFASDVY 66
Query: 490 ARVPHKTAGVNLYQQREAEAAMLVRKQQTYTLIDDDDDDEDEVVKEKKPSASESRKSDKA 311
A+VP + +G++ YQ++E EAA LV+KQ TY L+ D+DD+ D + ++ + S K+
Sbjct: 67 AKVPRRASGISNYQKQEREAAKLVQKQSTYKLLADEDDNTDNQTPTSQKTS--TNPSSKS 124
Query: 310 KKRFRKKSGQSDDSDEEVPVREESRNVRRKVSEDEDDG----SESEEERVRDQKEREELE 143
+K FR+K+ Q D D+E+ ++ RNVRR+ E++++G S+ E+ER+RDQ+E+ +LE
Sbjct: 125 RKHFRRKADQ-DSGDDEIVAKDSGRNVRRRTEEEDEEGGDSSSDDEKERIRDQQEKAQLE 183
Query: 142 QHLRDRDTARTRK 104
+++R+RD A TRK
Sbjct: 184 RNMRERDAANTRK 196
>gi|3608155|gb|AAC36188.1| putative pre-mRNA splicing factor RNA helicase
[Arabidopsis thaliana]
Length = 1087
Score = 133 bits (333), Expect = 5e-029
Identities = 66/85 (77%), Positives = 76/85 (89%)
Frame = -2
Query: 259 VPVREESRNVRRKVSEDEDDGSESEEERVRDQKEREELEQHLRDRDTARTRKLTEQKLSK 80
V VRE+ RNVRRKVSEDEDDG+ESEEER+RDQ+EREELEQHLR+RDTARTRKLTE K+SK
Sbjct: 175 VIVREDKRNVRRKVSEDEDDGTESEEERLRDQREREELEQHLRERDTARTRKLTEPKMSK 234
Query: 79 KEQEEALRREDAFKKDDLQSLRKVS 5
KEQEE +RR+ A K D++SLRK S
Sbjct: 235 KEQEEFVRRDSAVDKGDIESLRKFS 259
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,844,195,214,508
Number of Sequences: 15229318
Number of Extensions: 2844195214508
Number of Successful Extensions: 670869000
Number of sequences better than 0.0: 0
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