BLASTX 7.6.2
Query= UN23605 /QuerySize=1598
(1597 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G13570.1 | Symbols: SCL30A | SCL30a; RNA bindi... 134 2e-031
TAIR9_protein||AT1G55310.1 | Symbols: SR33, ATSCL33, SCL33 | SR3... 126 5e-029
TAIR9_protein||AT1G55310.2 | Symbols: SR33, ATSCL33, SCL33 | SR3... 126 5e-029
TAIR9_protein||AT3G55460.1 | Symbols: SCL30 | SCL30; RNA binding... 89 9e-018
TAIR9_protein||AT5G18810.1 | Symbols: SCL28 | SCL28; RNA binding... 81 1e-015
TAIR9_protein||AT5G64200.1 | Symbols: ATSC35, SC35 | ATSC35; RNA... 75 1e-013
TAIR9_protein||AT5G64200.2 | Symbols: ATSC35, SC35 | ATSC35; RNA... 75 1e-013
>TAIR9_protein||AT3G13570.1 | Symbols: SCL30A | SCL30a; RNA binding / nucleic
acid binding / nucleotide binding | chr3:4429564-4431602 REVERSE
Length = 263
Score = 134 bits (336), Expect = 2e-031
Identities = 79/134 (58%), Positives = 90/134 (67%), Gaps = 4/134 (2%)
Frame = -3
Query: 653 EPRGFGFVQYYDPDDAADAKYHLDGYVLLGREITVVFAEENRKKPSEMRERSRGRTSTRS 474
+PRGFGF+Q+ DP DAA+AK+ +DGY+LLGRE+TVVFAEENRKKP+EMR R RG S R
Sbjct: 76 DPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVVFAEENRKKPTEMRTRDRGGRSNRF 135
Query: 473 PYGYSRSPGYSRSPNYRRSYSRSPVYRRSYSRSPYDGRHRSRSVSPGDRRRSYSRSSSRS 294
P YSRSP RR RS R Y+ SP RH+SRSVSP DRR RS SRS
Sbjct: 136 QDRRRSPPRYSRSPPPRRG-RRSRSRSRGYN-SPPAKRHQSRSVSPQDRRYEKERSYSRS 193
Query: 293 --RYESRSRSQSPG 258
SR RS SPG
Sbjct: 194 PPHNGSRVRSGSPG 207
>TAIR9_protein||AT1G55310.1 | Symbols: SR33, ATSCL33, SCL33 | SR33; RNA binding
/ protein binding | chr1:20630676-20632695 FORWARD
Length = 288
Score = 126 bits (315), Expect = 5e-029
Identities = 79/144 (54%), Positives = 89/144 (61%), Gaps = 16/144 (11%)
Frame = -3
Query: 653 EPRGFGFVQYYDPDDAADAKYHLDGYVLLGREITVVFAEENRKKPSEMRERSRGRTSTRS 474
+PRGFGFVQ+ DP DAADAK+H+DGY+LLGRE+TVVFAEENRKKP+EMR R RG R
Sbjct: 75 DPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPTEMRARERGGGRFRD 134
Query: 473 -----PYGYSRSPGYSRSPNYRRSYSRSPVYRRSYSRSPYDGRHRSRSVSPG----DRRR 321
P YSR SRSP RR SRS R SP RH RS+SP D RR
Sbjct: 135 RRRTPPRYYSR----SRSPPPRRGRSRS---RSGDYYSPPPRRHHPRSISPREERYDGRR 187
Query: 320 SYSRSSSRSRYESRSRSQSPGYSR 249
SYSRS + RS + G SR
Sbjct: 188 SYSRSPASDGSRGRSLTPVRGKSR 211
Score = 63 bits (152), Expect = 4e-010
Identities = 33/44 (75%), Gaps = 3/44 (6%)
Frame = -3
Query: 1493 SYIPSPPR---RRYRSPSPAGHYRARSRDPPTSLLVRNLRLDCR 1371
SY PSPPR RR RSPSP G Y RSRD PTSLLVRNLR DCR
Sbjct: 5 SYTPSPPRGYGRRGRSPSPRGRYGGRSRDLPTSLLVRNLRHDCR 48
>TAIR9_protein||AT1G55310.2 | Symbols: SR33, ATSCL33, SCL33 | SR33; RNA binding
/ protein binding | chr1:20630676-20632567 FORWARD
Length = 221
Score = 126 bits (315), Expect = 5e-029
Identities = 79/144 (54%), Positives = 89/144 (61%), Gaps = 16/144 (11%)
Frame = -3
Query: 653 EPRGFGFVQYYDPDDAADAKYHLDGYVLLGREITVVFAEENRKKPSEMRERSRGRTSTRS 474
+PRGFGFVQ+ DP DAADAK+H+DGY+LLGRE+TVVFAEENRKKP+EMR R RG R
Sbjct: 75 DPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPTEMRARERGGGRFRD 134
Query: 473 -----PYGYSRSPGYSRSPNYRRSYSRSPVYRRSYSRSPYDGRHRSRSVSPG----DRRR 321
P YSR SRSP RR SRS R SP RH RS+SP D RR
Sbjct: 135 RRRTPPRYYSR----SRSPPPRRGRSRS---RSGDYYSPPPRRHHPRSISPREERYDGRR 187
Query: 320 SYSRSSSRSRYESRSRSQSPGYSR 249
SYSRS + RS + G SR
Sbjct: 188 SYSRSPASDGSRGRSLTPVRGKSR 211
Score = 63 bits (152), Expect = 4e-010
Identities = 33/44 (75%), Gaps = 3/44 (6%)
Frame = -3
Query: 1493 SYIPSPPR---RRYRSPSPAGHYRARSRDPPTSLLVRNLRLDCR 1371
SY PSPPR RR RSPSP G Y RSRD PTSLLVRNLR DCR
Sbjct: 5 SYTPSPPRGYGRRGRSPSPRGRYGGRSRDLPTSLLVRNLRHDCR 48
>TAIR9_protein||AT3G55460.1 | Symbols: SCL30 | SCL30; RNA binding / nucleic acid
binding / nucleotide binding | chr3:20561024-20563502 FORWARD
Length = 263
Score = 89 bits (218), Expect = 9e-018
Identities = 62/133 (46%), Positives = 77/133 (57%), Gaps = 9/133 (6%)
Frame = -3
Query: 653 EPRGFGFVQYYDPDDAADAKYHLDGYVLLGREITVVFAEENRKKPSEMRERSRGRTSTRS 474
+PRGF FV++ D DA +A+ ++ GREITVV A E+RK+P EMR ++ RT +R
Sbjct: 86 QPRGFAFVEFVDAYDAGEAQRSMNRRSFAGREITVVVASESRKRPEEMRVKT--RTRSRE 143
Query: 473 PYGYSRSPGYSRSPNYRRSYSRSPVYRRSYSRSPYDGRHRSRSVSPGDRRRSYSRSSSRS 294
P G SR + RS + S SRSP R S SRS R+RSRS SP RRR
Sbjct: 144 PSG-SRDRSHGRSRSRSISRSRSP-RRPSDSRS----RYRSRSYSPAPRRRGGPPRGEED 197
Query: 293 RYESRSRSQSPGY 255
SR RS SPGY
Sbjct: 198 ENYSR-RSYSPGY 209
>TAIR9_protein||AT5G18810.1 | Symbols: SCL28 | SCL28; RNA binding / nucleic acid
binding / nucleotide binding | chr5:6268925-6271158 REVERSE
Length = 237
Score = 81 bits (199), Expect = 1e-015
Identities = 66/154 (42%), Positives = 77/154 (50%), Gaps = 26/154 (16%)
Frame = -3
Query: 653 EPRGFGFVQYYDPDDAADAKYHLDGYVLLGREITVVFAEENRKKPSEMRERS-------- 498
EPRGFGFV+Y +DAA+A ++ V+ GREI +VFAEENRK P EMR +
Sbjct: 86 EPRGFGFVKYRYAEDAAEAMKRMNHKVIGGREIAIVFAEENRKTPQEMRTTNGTSGRHGD 145
Query: 497 RGRTSTRSPYGYSRSPGYSRSPNYRRSYSRSPVYRRSYSRSP--YDGRHRSRSVS----P 336
RTS RSP RS SRSP R S R S R Y R RSRS+S P
Sbjct: 146 YKRTSHRSPRRRYRSHSRSRSPPRRES-------RHSKVREDDLYSPRRRSRSISRSPLP 198
Query: 335 GDRRRSYSRSSSRSRYES-----RSRSQSPGYSR 249
+ R SR+ R E RSR S SR
Sbjct: 199 RNEREYKSRNCRSPREERVLTPIRSRCLSRSRSR 232
Score = 49 bits (115), Expect = 8e-006
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = -3
Query: 1193 RPDDLRRPFGRFGRLKDIYIPRNYYTG 1113
RP+DLR F RFG LKDIY+PRNYYTG
Sbjct: 59 RPNDLRDSFERFGPLKDIYLPRNYYTG 85
>TAIR9_protein||AT5G64200.1 | Symbols: ATSC35, SC35 | ATSC35; RNA binding /
nucleic acid binding / nucleotide binding | chr5:25681849-25683553
REVERSE
Length = 304
Score = 75 bits (182), Expect = 1e-013
Identities = 64/146 (43%), Positives = 76/146 (52%), Gaps = 16/146 (10%)
Frame = -3
Query: 653 EPRGFGFVQYYDPDDAADAKYHLDGYVLLGREITVVFAE--ENRKKPSEMR-----ERSR 495
+ RGF FV+Y D+A A LDG V+ GREITV FA+ N +K S+ R +SR
Sbjct: 55 DSRGFAFVRYKYKDEAHKAVERLDGRVVDGREITVQFAKYGPNAEKISKGRVVEPPPKSR 114
Query: 494 GRTSTRSPYGYSRSPGYSRSPNYRRSYSRSPVYRR----SYSRSPYDGRHRSRSVSPGDR 327
R+ +RSP SRSP SRSP RRS RS RR Y Y R RSRS DR
Sbjct: 115 -RSRSRSP-RRSRSPRRSRSPPRRRSPRRSRSPRRRSRDDYREKDYRKRSRSRSY---DR 169
Query: 326 RRSYSRSSSRSRYESRSRSQSPGYSR 249
R + R +RSRS SP R
Sbjct: 170 RERHEEKDRDHRRRTRSRSASPDEKR 195
>TAIR9_protein||AT5G64200.2 | Symbols: ATSC35, SC35 | ATSC35; RNA binding /
nucleic acid binding / nucleotide binding | chr5:25681849-25683553
REVERSE
Length = 304
Score = 75 bits (182), Expect = 1e-013
Identities = 64/146 (43%), Positives = 76/146 (52%), Gaps = 16/146 (10%)
Frame = -3
Query: 653 EPRGFGFVQYYDPDDAADAKYHLDGYVLLGREITVVFAE--ENRKKPSEMR-----ERSR 495
+ RGF FV+Y D+A A LDG V+ GREITV FA+ N +K S+ R +SR
Sbjct: 55 DSRGFAFVRYKYKDEAHKAVERLDGRVVDGREITVQFAKYGPNAEKISKGRVVEPPPKSR 114
Query: 494 GRTSTRSPYGYSRSPGYSRSPNYRRSYSRSPVYRR----SYSRSPYDGRHRSRSVSPGDR 327
R+ +RSP SRSP SRSP RRS RS RR Y Y R RSRS DR
Sbjct: 115 -RSRSRSP-RRSRSPRRSRSPPRRRSPRRSRSPRRRSRDDYREKDYRKRSRSRSY---DR 169
Query: 326 RRSYSRSSSRSRYESRSRSQSPGYSR 249
R + R +RSRS SP R
Sbjct: 170 RERHEEKDRDHRRRTRSRSASPDEKR 195
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,186,182,936
Number of Sequences: 33410
Number of Extensions: 12186182936
Number of Successful Extensions: 391856999
Number of sequences better than 0.0: 0
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