BLASTX 7.6.2
Query= UN23676 /QuerySize=721
(720 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G32650.1 | Symbols: | FUNCTIONS IN: molecular... 269 1e-072
TAIR9_protein||AT2G32650.2 | Symbols: | FUNCTIONS IN: molecular... 269 1e-072
TAIR9_protein||AT2G32180.1 | Symbols: PTAC18 | PTAC18 (PLASTID T... 268 3e-072
TAIR9_protein||AT2G27402.1 | Symbols: | FUNCTIONS IN: molecular... 86 3e-017
TAIR9_protein||AT3G04300.1 | Symbols: | FUNCTIONS IN: molecular... 61 5e-010
TAIR9_protein||AT4G10290.1 | Symbols: | FUNCTIONS IN: molecular... 61 7e-010
>TAIR9_protein||AT2G32650.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro
DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Protein of unknown
function DUF861, cupin-3 (InterPro:IPR008579), RmlC-like jelly roll
fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is:
PTAC18 (PLASTID TRANSCRIPTIONALLY ACTIVE 18) (TAIR:AT2G32180.1); Has
169 Blast hits to 169 proteins in 46 species: Archae - 0; Bacteria -
71; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes
- 17 (source: NCBI BLink). | chr2:13851547-13851966 FORWARD
Length = 140
Score = 269 bits (687), Expect = 1e-072
Identities = 127/140 (90%), Positives = 133/140 (95%), Gaps = 2/140 (1%)
Frame = +1
Query: 106 MSSFIMATPFPGSLTQCKKTNNLSLQRAFKVTCMQT--PLEELYNVKVERKVSQRRLEEL 279
M+S IM TPFPGS+T CKKTNNLS+QRAFKVTCMQT PLEELYNVKVERKVSQ+RLEEL
Sbjct: 1 MASLIMTTPFPGSVTACKKTNNLSVQRAFKVTCMQTEKPLEELYNVKVERKVSQKRLEEL 60
Query: 280 GVSRWSVWKTGKCKLPWDWQVDQLVYIEEGEVRVVPEGSKRFMQFLAGDLVRYPKWLEAD 459
GVSRWSVWKTGKCKLPWDWQVDQLVYIE+GEVRVVPEGSKR+MQFLAGDLVRYPKWLEAD
Sbjct: 61 GVSRWSVWKTGKCKLPWDWQVDQLVYIEQGEVRVVPEGSKRYMQFLAGDLVRYPKWLEAD 120
Query: 460 LFFNAPYRERYCFKAYGDD* 519
LFFNAPY ERYCFKAYGDD*
Sbjct: 121 LFFNAPYIERYCFKAYGDD* 140
>TAIR9_protein||AT2G32650.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro
DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Protein of unknown
function DUF861, cupin-3 (InterPro:IPR008579), RmlC-like jelly roll
fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is:
PTAC18 (PLASTID TRANSCRIPTIONALLY ACTIVE 18) (TAIR:AT2G32180.1); Has
169 Blast hits to 169 proteins in 46 species: Archae - 0; Bacteria -
71; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes
- 17 (source: NCBI BLink). | chr2:13851547-13851966 FORWARD
Length = 140
Score = 269 bits (687), Expect = 1e-072
Identities = 127/140 (90%), Positives = 133/140 (95%), Gaps = 2/140 (1%)
Frame = +1
Query: 106 MSSFIMATPFPGSLTQCKKTNNLSLQRAFKVTCMQT--PLEELYNVKVERKVSQRRLEEL 279
M+S IM TPFPGS+T CKKTNNLS+QRAFKVTCMQT PLEELYNVKVERKVSQ+RLEEL
Sbjct: 1 MASLIMTTPFPGSVTACKKTNNLSVQRAFKVTCMQTEKPLEELYNVKVERKVSQKRLEEL 60
Query: 280 GVSRWSVWKTGKCKLPWDWQVDQLVYIEEGEVRVVPEGSKRFMQFLAGDLVRYPKWLEAD 459
GVSRWSVWKTGKCKLPWDWQVDQLVYIE+GEVRVVPEGSKR+MQFLAGDLVRYPKWLEAD
Sbjct: 61 GVSRWSVWKTGKCKLPWDWQVDQLVYIEQGEVRVVPEGSKRYMQFLAGDLVRYPKWLEAD 120
Query: 460 LFFNAPYRERYCFKAYGDD* 519
LFFNAPY ERYCFKAYGDD*
Sbjct: 121 LFFNAPYIERYCFKAYGDD* 140
>TAIR9_protein||AT2G32180.1 | Symbols: PTAC18 | PTAC18 (PLASTID
TRANSCRIPTIONALLY ACTIVE 18) | chr2:13672362-13672781 REVERSE
Length = 140
Score = 268 bits (684), Expect = 3e-072
Identities = 126/140 (90%), Positives = 133/140 (95%), Gaps = 2/140 (1%)
Frame = +1
Query: 106 MSSFIMATPFPGSLTQCKKTNNLSLQRAFKVTCMQT--PLEELYNVKVERKVSQRRLEEL 279
M+S IM TPFPGS+T CKKTNNLS+QRAF+VTCMQT PLEELYNVKVERKVSQ+RLEEL
Sbjct: 1 MASLIMTTPFPGSVTTCKKTNNLSVQRAFRVTCMQTEKPLEELYNVKVERKVSQKRLEEL 60
Query: 280 GVSRWSVWKTGKCKLPWDWQVDQLVYIEEGEVRVVPEGSKRFMQFLAGDLVRYPKWLEAD 459
GVSRWSVWKTGKCKLPWDWQVDQLVYIE+GEVRVVPEGSKR+MQFLAGDLVRYPKWLEAD
Sbjct: 61 GVSRWSVWKTGKCKLPWDWQVDQLVYIEQGEVRVVPEGSKRYMQFLAGDLVRYPKWLEAD 120
Query: 460 LFFNAPYRERYCFKAYGDD* 519
LFFNAPY ERYCFKAYGDD*
Sbjct: 121 LFFNAPYIERYCFKAYGDD* 140
>TAIR9_protein||AT2G27402.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana protein match is:
PTAC18 (PLASTID TRANSCRIPTIONALLY ACTIVE 18) (TAIR:AT2G32180.1); Has 15
Blast hits to 15 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr2:11724031-11724189 FORWARD
Length = 53
Score = 86 bits (210), Expect = 3e-017
Identities = 42/52 (80%), Positives = 47/52 (90%), Gaps = 2/52 (3%)
Frame = +1
Query: 121 MATPFPGSLTQCKKTNNLSLQRAFKVTCMQT--PLEELYNVKVERKVSQRRL 270
M T FPGS+T CKKTNNLS+QRAF+VTCMQT PLEELYNVKVERKVS++RL
Sbjct: 1 MTTSFPGSVTTCKKTNNLSVQRAFRVTCMQTEKPLEELYNVKVERKVSKKRL 52
>TAIR9_protein||AT3G04300.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cupin,
RmlC-type (InterPro:IPR011051), Protein of unknown function DUF861,
cupin-3 (InterPro:IPR008579), RmlC-like jelly roll fold
(InterPro:IPR014710); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G10300.1); Has 364 Blast hits to 364 proteins
in 91 species: Archae - 0; Bacteria - 191; Metazoa - 0; Fungi - 0;
Plants - 78; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). |
chr3:1140318-1140723 FORWARD
Length = 97
Score = 61 bits (147), Expect = 5e-010
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Frame = +1
Query: 232 NVKVERKVSQRRLEELGVSRWSVWKTGKCKLPWDWQVDQLVYIEEGEVRVVPEGSKRFMQ 411
N+ +E S RRL +LGV W W K ++ + Y+ +G+V+V P+GS F++
Sbjct: 2 NIVIENNPSSRRLSDLGVMSWPKWSCQPGKYALVFEERETCYLVKGKVKVYPKGSSEFVE 61
Query: 412 FLAGDLVRYPKWL----EADLFFNAPYR 483
F AGDLV PK L + LF + Y+
Sbjct: 62 FGAGDLVTIPKGLSCTWDVSLFIDKHYK 89
>TAIR9_protein||AT4G10290.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cupin,
RmlC-type (InterPro:IPR011051), Protein of unknown function DUF861,
cupin-3 (InterPro:IPR008579), RmlC-like jelly roll fold
(InterPro:IPR014710); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G10280.1); Has 242 Blast hits to 242 proteins
in 52 species: Archae - 0; Bacteria - 84; Metazoa - 0; Fungi - 0;
Plants - 81; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). |
chr4:6379958-6381720 REVERSE
Length = 121
Score = 61 bits (146), Expect = 7e-010
Identities = 30/93 (32%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 223 ELYNVKVERKVSQRRLEELGVSRWSVWKTGKCKLPWDWQVDQLVYIEEGEVRVVPEGSKR 402
E++ VKV R+ S +L ELGV+ W +W++ K PW ++ + +Y EG+++V E +
Sbjct: 16 EIHGVKVMRQTSDAKLAELGVTSWQLWESMPRKFPWKFKKTETMYFVEGKLKVKVEDHHK 75
Query: 403 ---FMQFLAGDLVRYPKWLEADLFFNAPYRERY 492
++F+AGDLV +P+ + + ++RY
Sbjct: 76 EGEALEFVAGDLVVFPQDMNVFVDVIEDVKKRY 108
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,276,734,404
Number of Sequences: 33410
Number of Extensions: 12276734404
Number of Successful Extensions: 397144626
Number of sequences better than 0.0: 0
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