BLASTX 7.6.2
Query= UN23679 /QuerySize=1413
(1412 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G20310.1 | Symbols: RIN13 | RIN13 (RPM1 INTERA... 203 2e-052
TAIR9_protein||AT4G28690.1 | Symbols: | LOCATED IN: cellular_co... 190 3e-048
TAIR9_protein||AT4G27660.1 | Symbols: | unknown protein | chr4:... 117 3e-026
TAIR9_protein||AT5G54150.1 | Symbols: | unknown protein | chr5:... 90 3e-018
TAIR9_protein||AT5G54148.1 | Symbols: | unknown protein | chr5:... 75 9e-014
>TAIR9_protein||AT2G20310.1 | Symbols: RIN13 | RIN13 (RPM1 INTERACTING PROTEIN
13) | chr2:8761328-8763083 REVERSE
Length = 431
Score = 203 bits (516), Expect = 2e-052
Identities = 88/122 (72%), Positives = 103/122 (84%), Gaps = 2/122 (1%)
Frame = +1
Query: 349 KPVSEDLTVEDDDDCVVLDGDPYKTKEKETTLHTCEADDDILVLGQKGEIACIDFPHPRH 528
KP S + +EDDDDCV+LD DP KT +ETT + DDD+LV+GQKGEIAC DFPHPRH
Sbjct: 64 KPNSSNQALEDDDDCVILDCDPDKT--RETTSVDDDDDDDVLVVGQKGEIACRDFPHPRH 121
Query: 529 ACAKYPFNSTSHDKYCDMCHCYVCDIRAPCPHWCIGISTYNHCHANDKDQIWKNQRECIR 708
+CAKY FNSTSH+KYCDMCHCYVCDIRAPCP+WCI +S+ +HCHANDK++IWKNQRE R
Sbjct: 122 SCAKYAFNSTSHEKYCDMCHCYVCDIRAPCPYWCIAVSSIDHCHANDKEKIWKNQREYFR 181
Query: 709 TG 714
TG
Sbjct: 182 TG 183
>TAIR9_protein||AT4G28690.1 | Symbols: | LOCATED IN: cellular_component
unknown; BEST Arabidopsis thaliana protein match is: RIN13 (RPM1
INTERACTING PROTEIN 13) (TAIR:AT2G20310.1); Has 370 Blast hits to 352
proteins in 105 species: Archae - 0; Bacteria - 10; Metazoa - 143;
Fungi - 82; Plants - 80; Viruses - 3; Other Eukaryotes - 52 (source:
NCBI BLink). | chr4:14159093-14160876 FORWARD
Length = 449
Score = 190 bits (480), Expect = 3e-048
Identities = 95/170 (55%), Positives = 119/170 (70%), Gaps = 13/170 (7%)
Frame = +1
Query: 241 SMMNDIIYLSSDEEDHKLVDHTSFFYDDKPKRTCQWKPVSEDL----TVE---DDDDCVV 399
SM + ++ +SSDE+D K VD+ S+ D + + KP+ + TVE DDDDCV+
Sbjct: 3 SMNHIVVDVSSDEDDDKPVDY-SYLLDRILGVSDEKKPIKGTVLLNPTVENEDDDDDCVI 61
Query: 400 LDGDPYKTKEKETTLHTCEADDDILVLGQKGEIACIDFPHPRHACAKYPFNSTSHDKYCD 579
LD DP KET + TCE D +LV+GQKGE+AC DFPHPRHACAKYPF ST H +C+
Sbjct: 62 LDFDP---TAKETVIETCET-DGVLVVGQKGEVACRDFPHPRHACAKYPFKSTLHQTFCE 117
Query: 580 MCHCYVCDIRAPCPHWCI-GISTYNHCHANDKDQIWKNQRECIRTGTLLP 726
MCHCYVCD RAPC +W GIS +HCHANDK++ W +QRECIRTG +LP
Sbjct: 118 MCHCYVCDTRAPCTYWFSGGISNTDHCHANDKEKTWNDQRECIRTGNMLP 167
Score = 52 bits (124), Expect = 6e-007
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +1
Query: 1006 AQGLPYNPYVTPPTALQSNSQQTFRDYSQQFSRTSAVWSGPPNPPVKQQQQQQQ--RSVN 1179
AQ + T P + ++Q R+ +T+AV + PNPP QQQQQQQ RS +
Sbjct: 352 AQRIVTGSISTVPVSQSKEAKQFSRNMYSANVQTNAVPTMTPNPPAVQQQQQQQSGRSND 411
Query: 1180 RTLSEIEDWLMD 1215
R LSE EDWL+D
Sbjct: 412 RVLSEFEDWLLD 423
>TAIR9_protein||AT4G27660.1 | Symbols: | unknown protein |
chr4:13817249-13818027 REVERSE
Length = 183
Score = 117 bits (291), Expect = 3e-026
Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 22/172 (12%)
Frame = +1
Query: 202 EKEEKEKKKKKKKSMMNDIIYLSSDEEDHKLVDHTSFFYDDKPKRTCQWKPVSEDLTV-E 378
E ++K K K++K+ LS +EE+ + + P R +D+ + E
Sbjct: 17 ETKKKTKSKRRKR--------LSKEEEEEE---------EGTPLRGIFCLKTRQDMKIFE 59
Query: 379 DDDDCVVLDGDPYKT--KEKETTLHTCEADDDILVLGQKGEIACIDFPHPRHACAKYPFN 552
+ +DC +LD DP + K + E DDD+ ++ +KG++AC DFPHPRH C K+PF
Sbjct: 60 EKEDCFILDFDPNDSFDARKLSDSPASECDDDVAIVHEKGQVACRDFPHPRHLCLKFPFE 119
Query: 553 STSHDKYCDMCHCYVCDIRAPCPHWCIGISTYNHCHANDKDQIWKNQRECIR 708
S+ H +C+ C+CYVCD+ APC +W +T HC A + + WK R+ R
Sbjct: 120 SSQHSSHCNQCYCYVCDVVAPCAYWTASFAT-PHCEALENSK-WKPIRKLYR 169
>TAIR9_protein||AT5G54150.1 | Symbols: | unknown protein |
chr5:21977461-21978237 REVERSE
Length = 161
Score = 90 bits (222), Expect = 3e-018
Identities = 37/97 (38%), Positives = 61/97 (62%), Gaps = 7/97 (7%)
Frame = +1
Query: 376 EDDDDCVVLDGDPYKTKEKETTLHTCEADDDILVLGQKGEIACIDFPHPRHACAKYPFNS 555
E +DC +LD +P+ + + + + D D+ ++ + G++AC D+PHPRH C +PF S
Sbjct: 51 EKTEDCFILDFNPFDSFDVKRL--SFSLDKDLEIIHESGQVACRDYPHPRHLCLNFPFGS 108
Query: 556 TSHDKYCDMCHCYVCDIRAPCPHWCIGISTYNHCHAN 666
TS+ +CD+C+C+VCD APC W +HC+A+
Sbjct: 109 TSNATHCDLCYCHVCDKPAPCALW-----MSSHCNAS 140
>TAIR9_protein||AT5G54148.1 | Symbols: | unknown protein |
chr5:21976465-21977032 REVERSE
Length = 117
Score = 75 bits (183), Expect = 9e-014
Identities = 29/54 (53%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
Frame = +1
Query: 508 DFPHPRHACAKYPFNSTSHDKYCDMCHCYVCDIRAPCPHWCIGISTYNHCHAND 669
D+PHPRH C +PF ST + +CD+C+CYVCD APC W I S HC+A D
Sbjct: 57 DYPHPRHFCLNFPFGSTPNSSHCDLCYCYVCDKPAPCAEWTISTS---HCNAYD 107
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,276,734,404
Number of Sequences: 33410
Number of Extensions: 12276734404
Number of Successful Extensions: 397144626
Number of sequences better than 0.0: 0
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