BLASTX 7.6.2
Query= UN23714 /QuerySize=953
(952 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G12530.1 | Symbols: PSF2 | PSF2 | chr3:3972604... 362 3e-100
TAIR9_protein||AT3G12530.2 | Symbols: PSF2 | PSF2 | chr3:3972604... 323 1e-088
>TAIR9_protein||AT3G12530.1 | Symbols: PSF2 | PSF2 | chr3:3972604-3973864
REVERSE
Length = 211
Score = 362 bits (927), Expect = 3e-100
Identities = 178/216 (82%), Positives = 195/216 (90%), Gaps = 5/216 (2%)
Frame = -1
Query: 820 MAGQTDPHISLFSPQEVEFMAEDEMVEIVPNMNMDPLNFIAGDYGRFVPQIPTQVPLWLA 641
MAGQTDPHISLFSPQEVEFMAEDE+VEIVPNMNM+ LNFI+GD+GRF+PQIPT+VPLWLA
Sbjct: 1 MAGQTDPHISLFSPQEVEFMAEDELVEIVPNMNMEQLNFISGDFGRFIPQIPTKVPLWLA 60
Query: 640 VALKRRGKCTFRPPAWLSVDNLTQVLEAEREPQSKFQPLPSGYIEIARLLFDHARDDIPD 461
VALKRRGKCTFRPP W+SVDNLTQ+LEAERE QS FQ LP Y+EIARLLFDHARDDIPD
Sbjct: 61 VALKRRGKCTFRPPGWMSVDNLTQILEAERESQSTFQALPFSYVEIARLLFDHARDDIPD 120
Query: 460 MYMVKSLVEDIRDVRLHKLETNLGTFGADTTAVKMNNVSAMEVNLVRPFVIRALEAFYKH 281
MYMV+SLVEDIRDVRLHKLETNLG+F T+AVK++NVSAMEVN+VRPFVIRALEAFYKH
Sbjct: 121 MYMVRSLVEDIRDVRLHKLETNLGSF-QGTSAVKISNVSAMEVNIVRPFVIRALEAFYKH 179
Query: 280 DKPERDADREARSSSSSRQPSREANNEPRRPLRQR* 173
DKPE D DR+ RSS + RE NNEPRRPLRQR*
Sbjct: 180 DKPEADVDRDTRSS----RQQRETNNEPRRPLRQR* 211
>TAIR9_protein||AT3G12530.2 | Symbols: PSF2 | PSF2 | chr3:3972604-3973728
REVERSE
Length = 192
Score = 323 bits (827), Expect = 1e-088
Identities = 159/197 (80%), Positives = 176/197 (89%), Gaps = 5/197 (2%)
Frame = -1
Query: 763 MAEDEMVEIVPNMNMDPLNFIAGDYGRFVPQIPTQVPLWLAVALKRRGKCTFRPPAWLSV 584
MAEDE+VEIVPNMNM+ LNFI+GD+GRF+PQIPT+VPLWLAVALKRRGKCTFRPP W+SV
Sbjct: 1 MAEDELVEIVPNMNMEQLNFISGDFGRFIPQIPTKVPLWLAVALKRRGKCTFRPPGWMSV 60
Query: 583 DNLTQVLEAEREPQSKFQPLPSGYIEIARLLFDHARDDIPDMYMVKSLVEDIRDVRLHKL 404
DNLTQ+LEAERE QS FQ LP Y+EIARLLFDHARDDIPDMYMV+SLVEDIRDVRLHKL
Sbjct: 61 DNLTQILEAERESQSTFQALPFSYVEIARLLFDHARDDIPDMYMVRSLVEDIRDVRLHKL 120
Query: 403 ETNLGTFGADTTAVKMNNVSAMEVNLVRPFVIRALEAFYKHDKPERDADREARSSSSSRQ 224
ETNLG+F T+AVK++NVSAMEVN+VRPFVIRALEAFYKHDKPE D DR+ RSS +
Sbjct: 121 ETNLGSF-QGTSAVKISNVSAMEVNIVRPFVIRALEAFYKHDKPEADVDRDTRSS----R 175
Query: 223 PSREANNEPRRPLRQR* 173
RE NNEPRRPLRQR*
Sbjct: 176 QQRETNNEPRRPLRQR* 192
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,276,734,404
Number of Sequences: 33410
Number of Extensions: 12276734404
Number of Successful Extensions: 397144626
Number of sequences better than 0.0: 0
|