BLASTX 7.6.2
Query= UN23746 /QuerySize=777
(776 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G02740.1 | Symbols: | CONTAINS InterPro DOMAI... 227 6e-060
TAIR9_protein||AT4G02760.1 | Symbols: | FUNCTIONS IN: molecular... 191 5e-049
TAIR9_protein||AT4G02760.2 | Symbols: | FUNCTIONS IN: molecular... 191 5e-049
TAIR9_protein||AT4G02733.1 | Symbols: | FUNCTIONS IN: molecular... 179 2e-045
>TAIR9_protein||AT4G02740.1 | Symbols: | CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT4G02760.2); Has 1691 Blast
hits to 1200 proteins in 170 species: Archae - 2; Bacteria - 109;
Metazoa - 687; Fungi - 197; Plants - 199; Viruses - 23; Other
Eukaryotes - 474 (source: NCBI BLink). | chr4:1217756-1220834 REVERSE
Length = 480
Score = 227 bits (578), Expect = 6e-060
Identities = 123/189 (65%), Positives = 145/189 (76%), Gaps = 6/189 (3%)
Frame = +1
Query: 184 DLIVSSLLSSPSLS--SSPHSFDQALDRALASASDSVTDQDRLVDRTVELASLLLDSTKR 357
DLI+SS LS P S S +SFD+ LDRALASAS + QDRLVDRT+ELASLLLDST+R
Sbjct: 23 DLIISSFLSFPDSSPISISNSFDRVLDRALASASADESVQDRLVDRTLELASLLLDSTRR 82
Query: 358 CFRKRASLHNSNSWAFPRELTIKMFSMLDKKSLMQAMACCTMFHKCARDPLCYSHIELIN 537
CFRKRAS+HNSNSW+ P ELTIK+FSMLD KS+MQA CCTMF+KCA D LCYSHI+L
Sbjct: 83 CFRKRASVHNSNSWSLPPELTIKVFSMLDTKSMMQAAVCCTMFNKCAMDRLCYSHIDLTT 142
Query: 538 --KNVDDGVVRTMIHRAGNKLRFLELGQVASPA--RSSMPLLTGSCLYPLFDNHSFIGNG 705
+ D GVV TMI+RAG +LR L+LG+V A S+ PLL+GSCL PL NH F+G+
Sbjct: 143 SARYADKGVVSTMINRAGKELRSLKLGRVVRTAGSDSAAPLLSGSCLSPLAYNHGFLGSR 202
Query: 706 LRRVHLYNL 732
LR + LYNL
Sbjct: 203 LRSLRLYNL 211
>TAIR9_protein||AT4G02760.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cyclin-like
F-box (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G02740.1); Has 3231 Blast hits to 948 proteins
in 145 species: Archae - 0; Bacteria - 50; Metazoa - 1253; Fungi - 344;
Plants - 69; Viruses - 27; Other Eukaryotes - 1488 (source: NCBI
BLink). | chr4:1224336-1227857 REVERSE
Length = 507
Score = 191 bits (484), Expect = 5e-049
Identities = 101/170 (59%), Positives = 122/170 (71%), Gaps = 5/170 (2%)
Frame = +1
Query: 238 SFDQALDR---ALASASDSVTDQDRLVDRTVELASLLLDSTKRCFRKRASLHNSNSWAFP 408
SFD+ LD ++A S DQDR +DRT++LASLL STKRC RKRA+L NS SW
Sbjct: 61 SFDRVLDNVIPSIAGTSRDEFDQDRFLDRTLQLASLLYKSTKRCIRKRATLQNSTSWPLL 120
Query: 409 RELTIKMFSMLDKKSLMQAMACCTMFHKCARDPLCYSHIELIN--KNVDDGVVRTMIHRA 582
ELTIK+FSMLD KSLMQA ACCTMF+KCA D +CYSHI+L ++VD+GVV MIHRA
Sbjct: 121 PELTIKVFSMLDTKSLMQASACCTMFNKCAMDRVCYSHIDLTTAAEDVDNGVVCVMIHRA 180
Query: 583 GNKLRFLELGQVASPARSSMPLLTGSCLYPLFDNHSFIGNGLRRVHLYNL 732
G +LR L+LG ++S A + LLT SCL PL NH F G LR +HLY+L
Sbjct: 181 GKELRSLKLGSISSSAEPTTSLLTRSCLTPLTFNHGFTGGHLRSLHLYHL 230
>TAIR9_protein||AT4G02760.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cyclin-like
F-box (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G02740.1); Has 3231 Blast hits to 948 proteins
in 145 species: Archae - 0; Bacteria - 50; Metazoa - 1253; Fungi - 344;
Plants - 69; Viruses - 27; Other Eukaryotes - 1488 (source: NCBI
BLink). | chr4:1224336-1227857 REVERSE
Length = 507
Score = 191 bits (484), Expect = 5e-049
Identities = 101/170 (59%), Positives = 122/170 (71%), Gaps = 5/170 (2%)
Frame = +1
Query: 238 SFDQALDR---ALASASDSVTDQDRLVDRTVELASLLLDSTKRCFRKRASLHNSNSWAFP 408
SFD+ LD ++A S DQDR +DRT++LASLL STKRC RKRA+L NS SW
Sbjct: 61 SFDRVLDNVIPSIAGTSRDEFDQDRFLDRTLQLASLLYKSTKRCIRKRATLQNSTSWPLL 120
Query: 409 RELTIKMFSMLDKKSLMQAMACCTMFHKCARDPLCYSHIELIN--KNVDDGVVRTMIHRA 582
ELTIK+FSMLD KSLMQA ACCTMF+KCA D +CYSHI+L ++VD+GVV MIHRA
Sbjct: 121 PELTIKVFSMLDTKSLMQASACCTMFNKCAMDRVCYSHIDLTTAAEDVDNGVVCVMIHRA 180
Query: 583 GNKLRFLELGQVASPARSSMPLLTGSCLYPLFDNHSFIGNGLRRVHLYNL 732
G +LR L+LG ++S A + LLT SCL PL NH F G LR +HLY+L
Sbjct: 181 GKELRSLKLGSISSSAEPTTSLLTRSCLTPLTFNHGFTGGHLRSLHLYHL 230
>TAIR9_protein||AT4G02733.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cyclin-like
F-box (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G02740.1); Has 156 Blast hits to 154 proteins
in 41 species: Archae - 0; Bacteria - 0; Metazoa - 136; Fungi - 0;
Plants - 18; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
chr4:1210173-1211512 REVERSE
Length = 302
Score = 179 bits (454), Expect = 2e-045
Identities = 109/203 (53%), Positives = 135/203 (66%), Gaps = 26/203 (12%)
Frame = +1
Query: 151 SIQNPNSLP----------NFDLIVSSLLS---SPSLSSSPHSFDQALDRALASASDSVT 291
S +NPNS P + D I+SSL++ SPSLS S SFD+ LD L+S SV
Sbjct: 3 STENPNSSPLSDSLEFNERHLDSIISSLVTFPDSPSLSIS-SSFDRVLDHLLSSGDVSV- 60
Query: 292 DQDRLVDRTVELASLLLDSTKRCFRKRASLHNSNSWAFPRELTIKMFSMLDKKSLMQAMA 471
QD+LVDRT+E SLLL STKRC +KRA+LHNS SW P ELT+K+FSM+D KSLMQA A
Sbjct: 61 -QDQLVDRTLERFSLLLQSTKRCSQKRATLHNSISWFLPSELTVKVFSMVDTKSLMQASA 119
Query: 472 CCTMFHKCARDPLCYSHIELIN--KNVDDGVVRTMIHRAGNKLRFLELGQVASPARSSMP 645
CCTMF+ CA DPLCY HI+L K+VDD V+RT+++R+G +LR L+LG+V +P
Sbjct: 120 CCTMFNNCAMDPLCYFHIDLTKAFKHVDDRVLRTLLNRSGKQLRSLKLGRVDAPG----C 175
Query: 646 LLTGSCLYPLFDNHSFIGNGLRR 714
L SCL PL GN RR
Sbjct: 176 LFRSSCLPPLI----LYGNNARR 194
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,276,734,404
Number of Sequences: 33410
Number of Extensions: 12276734404
Number of Successful Extensions: 397144626
Number of sequences better than 0.0: 0
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