BLASTX 7.6.2
Query= UN23760 /QuerySize=696
(695 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G79970.1 | Symbols: | FUNCTIONS IN: molecular... 124 5e-029
TAIR9_protein||AT1G79970.2 | Symbols: | FUNCTIONS IN: molecular... 123 1e-028
TAIR9_protein||AT2G25690.1 | Symbols: | senescence-associated p... 64 6e-011
TAIR9_protein||AT2G25690.2 | Symbols: | senescence-associated p... 64 6e-011
TAIR9_protein||AT3G22550.1 | Symbols: | senescence-associated p... 62 3e-010
TAIR9_protein||AT5G11460.1 | Symbols: | senescence-associated p... 56 2e-008
>TAIR9_protein||AT1G79970.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
senescence-associated protein-related (TAIR:AT2G25690.2); Has 74 Blast
hits to 74 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink). | chr1:30082773-30083592 FORWARD
Length = 241
Score = 124 bits (311), Expect = 5e-029
Identities = 71/110 (64%), Positives = 80/110 (72%), Gaps = 11/110 (10%)
Frame = -2
Query: 679 VVEEHDSPRR-SSSSPVDIISSQAYSRSLSAREMALSEDYTCIISHGPNPKTTHIFGDCI 503
+VEE PRR SSSSP+DIIS+ YSRSLS REMALSEDYTCIISHGPNPKTT+IFGDCI
Sbjct: 122 IVEE---PRRSSSSSPMDIIST--YSRSLSGREMALSEDYTCIISHGPNPKTTYIFGDCI 176
Query: 502 LDCDPKELGSKDETEKPEGDDDDSFLCLCTDKAQNHHIHMHGREASPAAA 353
LDCDPK+LG +D EGDD S T+K QNH +E+ A A
Sbjct: 177 LDCDPKDLGKEDIEIHEEGDDSFS-----TEKPQNHREVSAEKESENAGA 221
>TAIR9_protein||AT1G79970.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
senescence-associated protein-related (TAIR:AT2G25690.2); Has 74 Blast
hits to 74 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink). | chr1:30082773-30083429 FORWARD
Length = 219
Score = 123 bits (308), Expect = 1e-028
Identities = 68/96 (70%), Positives = 75/96 (78%), Gaps = 11/96 (11%)
Frame = -2
Query: 679 VVEEHDSPRR-SSSSPVDIISSQAYSRSLSAREMALSEDYTCIISHGPNPKTTHIFGDCI 503
+VEE PRR SSSSP+DIIS+ YSRSLS REMALSEDYTCIISHGPNPKTT+IFGDCI
Sbjct: 122 IVEE---PRRSSSSSPMDIIST--YSRSLSGREMALSEDYTCIISHGPNPKTTYIFGDCI 176
Query: 502 LDCDPKELGSKDETEKPEGDDDDSFLCLCTDKAQNH 395
LDCDPK+LG +D EGDD S T+K QNH
Sbjct: 177 LDCDPKDLGKEDIEIHEEGDDSFS-----TEKPQNH 207
>TAIR9_protein||AT2G25690.1 | Symbols: | senescence-associated protein-related
| chr2:10940530-10941649 REVERSE
Length = 325
Score = 64 bits (155), Expect = 6e-011
Identities = 28/54 (51%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
Frame = -2
Query: 571 EDYTCIISHGPNPKTTHIFGDCILDCDPKELGSKDETEKPEGD--DDDSFLCLC 416
EDYTCII+HGPNPKTTHI+GD +L+C EL ++ ++ G D+FL +C
Sbjct: 218 EDYTCIIAHGPNPKTTHIYGDRVLECHKNELKGDEDNKEKFGSVFPSDNFLGIC 271
>TAIR9_protein||AT2G25690.2 | Symbols: | senescence-associated protein-related
| chr2:10940530-10941649 REVERSE
Length = 325
Score = 64 bits (155), Expect = 6e-011
Identities = 28/54 (51%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
Frame = -2
Query: 571 EDYTCIISHGPNPKTTHIFGDCILDCDPKELGSKDETEKPEGD--DDDSFLCLC 416
EDYTCII+HGPNPKTTHI+GD +L+C EL ++ ++ G D+FL +C
Sbjct: 218 EDYTCIIAHGPNPKTTHIYGDRVLECHKNELKGDEDNKEKFGSVFPSDNFLGIC 271
>TAIR9_protein||AT3G22550.1 | Symbols: | senescence-associated protein-related
| chr3:7991827-7992805 REVERSE
Length = 268
Score = 62 bits (149), Expect = 3e-010
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Frame = -2
Query: 682 GVVEEHDSPR-RSSSSPVDIISSQAYSRSLSAREMALSEDYTCIISHGPNPKTTHIFGDC 506
G+ + P + S + S + S A +M LSEDYTC+ HGPNP+T HIF +C
Sbjct: 133 GIKTRNSQPETKKPGSESGLGSPRIISGYFPASDMELSEDYTCVTCHGPNPRTIHIFDNC 192
Query: 505 ILDCDPKELGSKDETEKPEGDDD----DSFLCLC 416
I++ P + + E D D DSFL C
Sbjct: 193 IVESQPGVVFFRSSDPVNESDSDYSPPDSFLSCC 226
>TAIR9_protein||AT5G11460.1 | Symbols: | senescence-associated protein-related
| chr5:3657064-3658388 REVERSE
Length = 345
Score = 56 bits (133), Expect = 2e-008
Identities = 21/35 (60%), Positives = 29/35 (82%)
Frame = -2
Query: 586 EMALSEDYTCIISHGPNPKTTHIFGDCILDCDPKE 482
+M +SEDYTC+ISHGPNPKTTH +GD +++ +E
Sbjct: 203 DMEISEDYTCVISHGPNPKTTHFYGDQVMESVERE 237
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,276,734,404
Number of Sequences: 33410
Number of Extensions: 12276734404
Number of Successful Extensions: 397144626
Number of sequences better than 0.0: 0
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