BLASTX 7.6.2
Query= UN23824 /QuerySize=1247
(1246 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G19860.2 | Symbols: | basic helix-loop-helix ... 523 1e-148
TAIR9_protein||AT3G19860.1 | Symbols: | basic helix-loop-helix ... 517 1e-146
TAIR9_protein||AT4G36060.1 | Symbols: | basic helix-loop-helix ... 146 3e-035
TAIR9_protein||AT4G36060.2 | Symbols: | basic helix-loop-helix ... 146 3e-035
TAIR9_protein||AT4G14410.1 | Symbols: | basic helix-loop-helix ... 91 1e-018
TAIR9_protein||AT4G14410.2 | Symbols: | basic helix-loop-helix ... 91 1e-018
TAIR9_protein||AT3G23210.1 | Symbols: | basic helix-loop-helix ... 85 8e-017
>TAIR9_protein||AT3G19860.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr3:6903842-6905863 FORWARD
Length = 338
Score = 523 bits (1345), Expect = 1e-148
Identities = 279/336 (83%), Positives = 292/336 (86%), Gaps = 12/336 (3%)
Frame = +1
Query: 31 LVREQRERAGLARTNKKNLSFFVEHLSLSSISIESLRHRLRRFERRVMDVSARKSQKAGR 210
LV +RER AR + S F E L S + E VMDVSARKSQKAGR
Sbjct: 10 LVSRERER---ARRLENRESIFAEPPCLLLAHRISPSPSILPAEEEVMDVSARKSQKAGR 66
Query: 211 EKLRREKLNEHFVELGNVLDPERPKNDKATILTDTLQLLKDLTSEVTKLKSEYTALTDES 390
EKLRREKLNEHFVELGNVLDPERPKNDKATILTDT+QLLK+LTSEV KLKSEYTALTDES
Sbjct: 67 EKLRREKLNEHFVELGNVLDPERPKNDKATILTDTVQLLKELTSEVNKLKSEYTALTDES 126
Query: 391 RELTQEKNDLREEKTSLKSDIENLNLQYQQRLRSMSPWGAAMDHTVMMAPPPSFPYPMPM 570
RELTQEKNDLREEKTSLKSDIENLNLQYQQRLRSMSPWGAAMDHTVMMAPPPSFPYPMP+
Sbjct: 127 RELTQEKNDLREEKTSLKSDIENLNLQYQQRLRSMSPWGAAMDHTVMMAPPPSFPYPMPI 186
Query: 571 AMPPGSIPMHHHPPMPSYTYFGNQNPSMMPAP---YMPYMQPPNTVVEQQSVHIPQN--N 735
AMPPGSIPM HP MPSYTYFGNQNPSM+PAP YMPYM PPNTVVEQQSVHIPQN N
Sbjct: 187 AMPPGSIPM--HPSMPSYTYFGNQNPSMIPAPCPTYMPYM-PPNTVVEQQSVHIPQNPGN 243
Query: 736 RSREPRTKVSRESRSDKAEDSNDVATQLELKTPGSTSDKDTLQRPEKSKRCKRNSNNNNS 915
RSREPR KVSRESRS+KAEDSN+VATQLELKTPGSTSDKDTLQRPEK+KRCKRN NNNNS
Sbjct: 244 RSREPRAKVSRESRSEKAEDSNEVATQLELKTPGSTSDKDTLQRPEKTKRCKRN-NNNNS 302
Query: 916 VEESSHSSKCSSSPSVRDNTSSSSVAGGLKPDDAK* 1023
+EESSHSSKCSSSPSVRD++SSSSVAGG KPDDAK*
Sbjct: 303 IEESSHSSKCSSSPSVRDHSSSSSVAGGQKPDDAK* 338
>TAIR9_protein||AT3G19860.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr3:6904579-6905863 FORWARD
Length = 285
Score = 517 bits (1329), Expect = 1e-146
Identities = 265/289 (91%), Positives = 275/289 (95%), Gaps = 9/289 (3%)
Frame = +1
Query: 172 MDVSARKSQKAGREKLRREKLNEHFVELGNVLDPERPKNDKATILTDTLQLLKDLTSEVT 351
MDVSARKSQKAGREKLRREKLNEHFVELGNVLDPERPKNDKATILTDT+QLLK+LTSEV
Sbjct: 1 MDVSARKSQKAGREKLRREKLNEHFVELGNVLDPERPKNDKATILTDTVQLLKELTSEVN 60
Query: 352 KLKSEYTALTDESRELTQEKNDLREEKTSLKSDIENLNLQYQQRLRSMSPWGAAMDHTVM 531
KLKSEYTALTDESRELTQEKNDLREEKTSLKSDIENLNLQYQQRLRSMSPWGAAMDHTVM
Sbjct: 61 KLKSEYTALTDESRELTQEKNDLREEKTSLKSDIENLNLQYQQRLRSMSPWGAAMDHTVM 120
Query: 532 MAPPPSFPYPMPMAMPPGSIPMHHHPPMPSYTYFGNQNPSMMPAP---YMPYMQPPNTVV 702
MAPPPSFPYPMP+AMPPGSIPM HP MPSYTYFGNQNPSM+PAP YMPYM PPNTVV
Sbjct: 121 MAPPPSFPYPMPIAMPPGSIPM--HPSMPSYTYFGNQNPSMIPAPCPTYMPYM-PPNTVV 177
Query: 703 EQQSVHIPQN--NRSREPRTKVSRESRSDKAEDSNDVATQLELKTPGSTSDKDTLQRPEK 876
EQQSVHIPQN NRSREPR KVSRESRS+KAEDSN+VATQLELKTPGSTSDKDTLQRPEK
Sbjct: 178 EQQSVHIPQNPGNRSREPRAKVSRESRSEKAEDSNEVATQLELKTPGSTSDKDTLQRPEK 237
Query: 877 SKRCKRNSNNNNSVEESSHSSKCSSSPSVRDNTSSSSVAGGLKPDDAK* 1023
+KRCKRN NNNNS+EESSHSSKCSSSPSVRD++SSSSVAGG KPDDAK*
Sbjct: 238 TKRCKRN-NNNNSIEESSHSSKCSSSPSVRDHSSSSSVAGGQKPDDAK* 285
>TAIR9_protein||AT4G36060.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:17055397-17056567 FORWARD
Length = 287
Score = 146 bits (368), Expect = 3e-035
Identities = 69/104 (66%), Positives = 88/104 (84%)
Frame = +1
Query: 193 SQKAGREKLRREKLNEHFVELGNVLDPERPKNDKATILTDTLQLLKDLTSEVTKLKSEYT 372
SQKA REKLRR+KL E F+ELGN LDP RPK+DKA++LTDT+Q+LKD+ ++V +LK+EY
Sbjct: 47 SQKAEREKLRRDKLKEQFLELGNALDPNRPKSDKASVLTDTIQMLKDVMNQVDRLKAEYE 106
Query: 373 ALTDESRELTQEKNDLREEKTSLKSDIENLNLQYQQRLRSMSPW 504
L+ ESREL QEK++LREEK +LKSDIE LN QYQ R+++M PW
Sbjct: 107 TLSQESRELIQEKSELREEKATLKSDIEILNAQYQHRIKTMVPW 150
>TAIR9_protein||AT4G36060.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:17055521-17056567 FORWARD
Length = 269
Score = 146 bits (368), Expect = 3e-035
Identities = 69/104 (66%), Positives = 88/104 (84%)
Frame = +1
Query: 193 SQKAGREKLRREKLNEHFVELGNVLDPERPKNDKATILTDTLQLLKDLTSEVTKLKSEYT 372
SQKA REKLRR+KL E F+ELGN LDP RPK+DKA++LTDT+Q+LKD+ ++V +LK+EY
Sbjct: 29 SQKAEREKLRRDKLKEQFLELGNALDPNRPKSDKASVLTDTIQMLKDVMNQVDRLKAEYE 88
Query: 373 ALTDESRELTQEKNDLREEKTSLKSDIENLNLQYQQRLRSMSPW 504
L+ ESREL QEK++LREEK +LKSDIE LN QYQ R+++M PW
Sbjct: 89 TLSQESRELIQEKSELREEKATLKSDIEILNAQYQHRIKTMVPW 132
>TAIR9_protein||AT4G14410.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:8300077-8301503 FORWARD
Length = 284
Score = 91 bits (224), Expect = 1e-018
Identities = 64/164 (39%), Positives = 87/164 (53%), Gaps = 12/164 (7%)
Frame = +1
Query: 130 ESLRHRLRRFERRVMDVSARKSQKAGREKLRREKLNEHFVELGNVLDPER-PKNDKATIL 306
E L R R S KA RE+LRREKLNE F++L +VL+P R PK DK IL
Sbjct: 112 EHLDDDCSRKRARTGSCSRGGGTKACRERLRREKLNERFMDLSSVLEPGRTPKTDKPAIL 171
Query: 307 TDTLQLLKDLTSEVTKLKSEYTALTDESRELTQEKNDLREEKTSLKSDIENLNLQYQQRL 486
D +++L L E KL+ L +E + L EKN+LREEK LK+D E + +Q+L
Sbjct: 172 DDAIRILNQLRDEALKLEETNQKLLEEIKSLKAEKNELREEKLVLKADKE----KTEQQL 227
Query: 487 RSM-SPWGAAMDHTVMMAPPPSFPYPMPMAMPP-GSIPMHHHPP 612
+SM +P + H P +F + P G +PM H+ P
Sbjct: 228 KSMTAPSSGFIPHI-----PAAFNHNKMAVYPSYGYMPMWHYMP 266
>TAIR9_protein||AT4G14410.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:8300418-8301503 FORWARD
Length = 278
Score = 91 bits (224), Expect = 1e-018
Identities = 64/164 (39%), Positives = 87/164 (53%), Gaps = 12/164 (7%)
Frame = +1
Query: 130 ESLRHRLRRFERRVMDVSARKSQKAGREKLRREKLNEHFVELGNVLDPER-PKNDKATIL 306
E L R R S KA RE+LRREKLNE F++L +VL+P R PK DK IL
Sbjct: 106 EHLDDDCSRKRARTGSCSRGGGTKACRERLRREKLNERFMDLSSVLEPGRTPKTDKPAIL 165
Query: 307 TDTLQLLKDLTSEVTKLKSEYTALTDESRELTQEKNDLREEKTSLKSDIENLNLQYQQRL 486
D +++L L E KL+ L +E + L EKN+LREEK LK+D E + +Q+L
Sbjct: 166 DDAIRILNQLRDEALKLEETNQKLLEEIKSLKAEKNELREEKLVLKADKE----KTEQQL 221
Query: 487 RSM-SPWGAAMDHTVMMAPPPSFPYPMPMAMPP-GSIPMHHHPP 612
+SM +P + H P +F + P G +PM H+ P
Sbjct: 222 KSMTAPSSGFIPHI-----PAAFNHNKMAVYPSYGYMPMWHYMP 260
>TAIR9_protein||AT3G23210.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr3:8283255-8284915 REVERSE
Length = 321
Score = 85 bits (209), Expect = 8e-017
Identities = 59/159 (37%), Positives = 87/159 (54%), Gaps = 15/159 (9%)
Frame = +1
Query: 160 ERRVMDVSARKSQKAGREKLRREKLNEHFVELGNVLDPER-PKNDKATILTDTLQLLKDL 336
+RR ++ KA REKLRREKLN+ F++L +VL+P R PK DK+ IL D ++++ L
Sbjct: 154 KRRRTGSCSKPGTKACREKLRREKLNDKFMDLSSVLEPGRTPKTDKSAILDDAIRVVNQL 213
Query: 337 TSEVTKLKSEYTALTDESRELTQEKNDLREEKTSLKSDIENLNLQYQQRLRSM---SPWG 507
E +L+ L +E + L +KN+LREEK LK++ E + +Q+L+SM SP
Sbjct: 214 RGEAHELQETNQKLLEEIKSLKADKNELREEKLVLKAEKEKM----EQQLKSMVVPSPGF 269
Query: 508 AAMDHTVMMAPPPSFPYPMPMAMPPGSIP--MHHHPPMP 618
H P + M +A P G P M P+P
Sbjct: 270 MPSQH-----PAAFHSHKMAVAYPYGYYPPNMPMWSPLP 303
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,319,083,204
Number of Sequences: 33410
Number of Extensions: 12319083204
Number of Successful Extensions: 397208598
Number of sequences better than 0.0: 0
|
