BLASTX 7.6.2
Query= UN23827 /QuerySize=796
(795 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G15640.1 | Symbols: | cytochrome c oxidase fa... 303 1e-082
TAIR9_protein||AT3G15640.2 | Symbols: | cytochrome c oxidase fa... 297 9e-081
TAIR9_protein||AT1G80230.1 | Symbols: | cytochrome c oxidase fa... 243 9e-065
TAIR9_protein||AT1G52710.1 | Symbols: | cytochrome c oxidase-re... 153 1e-037
>TAIR9_protein||AT3G15640.1 | Symbols: | cytochrome c oxidase family protein |
chr3:5299273-5301371 FORWARD
Length = 177
Score = 303 bits (774), Expect = 1e-082
Identities = 147/177 (83%), Positives = 156/177 (88%)
Frame = +3
Query: 132 MLRRIVTSHLKTLAADVASASPRRSIATTTTTARQHVGFHRAANPVSSSVIPRCFSSESV 311
M RRIV+S LKTLAADV +ASPRRSIA TT ++ +R+A SS VIPR FSS+SV
Sbjct: 1 MWRRIVSSQLKTLAADVVAASPRRSIAATTRPVGFYLAANRSAISASSFVIPRRFSSDSV 60
Query: 312 ERIAKKKVEDVMPIATGHEKEDLQAELEGRRLLDIDFPEGPFGTKEAPAIVKSYYDKRIV 491
E A KKVEDVMPIATGHEKE+L+AELEGRRL DIDFPEGPFGTKEAPAIVKSYYDKRIV
Sbjct: 61 ETPATKKVEDVMPIATGHEKEELEAELEGRRLDDIDFPEGPFGTKEAPAIVKSYYDKRIV 120
Query: 492 GCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFELEVVGPGGPPDGHGDEDDEHHH* 662
GCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFELEVVGPGGPPDGHGDEDDEHHH*
Sbjct: 121 GCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFELEVVGPGGPPDGHGDEDDEHHH* 177
>TAIR9_protein||AT3G15640.2 | Symbols: | cytochrome c oxidase family protein |
chr3:5299273-5301371 FORWARD
Length = 176
Score = 297 bits (758), Expect = 9e-081
Identities = 146/177 (82%), Positives = 155/177 (87%), Gaps = 1/177 (0%)
Frame = +3
Query: 132 MLRRIVTSHLKTLAADVASASPRRSIATTTTTARQHVGFHRAANPVSSSVIPRCFSSESV 311
M RRIV+S LKTLAADV +ASPRRSIA TT ++ +R+A SS VIPR FSS+S
Sbjct: 1 MWRRIVSSQLKTLAADVVAASPRRSIAATTRPVGFYLAANRSAISASSFVIPRRFSSDS- 59
Query: 312 ERIAKKKVEDVMPIATGHEKEDLQAELEGRRLLDIDFPEGPFGTKEAPAIVKSYYDKRIV 491
E A KKVEDVMPIATGHEKE+L+AELEGRRL DIDFPEGPFGTKEAPAIVKSYYDKRIV
Sbjct: 60 ETPATKKVEDVMPIATGHEKEELEAELEGRRLDDIDFPEGPFGTKEAPAIVKSYYDKRIV 119
Query: 492 GCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFELEVVGPGGPPDGHGDEDDEHHH* 662
GCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFELEVVGPGGPPDGHGDEDDEHHH*
Sbjct: 120 GCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFELEVVGPGGPPDGHGDEDDEHHH* 176
>TAIR9_protein||AT1G80230.1 | Symbols: | cytochrome c oxidase family protein |
chr1:30169784-30170999 REVERSE
Length = 172
Score = 243 bits (620), Expect = 9e-065
Identities = 118/170 (69%), Positives = 136/170 (80%), Gaps = 5/170 (2%)
Frame = +3
Query: 138 RRIVTSHLKTLAADVASASPRRSIATTTTTARQHVGFHRAAN--PVSSSVIPRCFSSESV 311
RRIV+SHLK+++A + A+P A +T H+ A+ P SS+ R S +
Sbjct: 3 RRIVSSHLKSISAVGSCAAPSCRHAVVEST---HLSLSTRASSIPAYSSIFSRLIGSAAA 59
Query: 312 ERIAKKKVEDVMPIATGHEKEDLQAELEGRRLLDIDFPEGPFGTKEAPAIVKSYYDKRIV 491
+ KK+VEDVMPIATGHEKE+LQAELEGR+L DIDFPEGPFGTKEAPA+VKSYYD RIV
Sbjct: 60 DTAVKKRVEDVMPIATGHEKEELQAELEGRKLDDIDFPEGPFGTKEAPAVVKSYYDMRIV 119
Query: 492 GCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFELEVVGPGGPPDGHGDE 641
GCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYF+LEVVGPGGPPDGHGD+
Sbjct: 120 GCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFKLEVVGPGGPPDGHGDD 169
>TAIR9_protein||AT1G52710.1 | Symbols: | cytochrome c oxidase-related |
chr1:19638627-19640112 REVERSE
Length = 91
Score = 153 bits (386), Expect = 1e-037
Identities = 67/93 (72%), Positives = 76/93 (81%), Gaps = 6/93 (6%)
Frame = +3
Query: 378 LQAELEGRRLLDIDFPEGPFGTKEAPAIVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGK 557
L E GRRLLDID PE PFGTKE+PA+V+SY+DKR +GC GGEGED HDVVWFWL+KGK
Sbjct: 4 LDKEYSGRRLLDIDHPESPFGTKESPAVVQSYFDKRNIGCRGGEGEDGHDVVWFWLDKGK 63
Query: 558 SFECPVCTQYFELEVVGPGGPPDGHGDEDDEHH 656
SFECPVC+QYFE GPPDGHGD++D HH
Sbjct: 64 SFECPVCSQYFE------HGPPDGHGDDEDHHH 90
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,319,083,204
Number of Sequences: 33410
Number of Extensions: 12319083204
Number of Successful Extensions: 397208598
Number of sequences better than 0.0: 0
|