Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN23828


BLASTX 7.6.2

Query= UN23828 /QuerySize=1024
        (1023 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT4G33350.1 | Symbols:  | chloroplast inner membr...    451   4e-127
TAIR9_protein||AT3G23710.1 | Symbols:  | chloroplast inner membr...    143   3e-034

>TAIR9_protein||AT4G33350.1 | Symbols:  | chloroplast inner membrane import
        protein Tic22, putative | chr4:16064638-16066715 REVERSE

          Length = 269

 Score =  451 bits (1159), Expect = 4e-127
 Identities = 235/269 (87%), Positives = 249/269 (92%), Gaps = 8/269 (2%)
 Frame = +1

Query:  49 SSVKPNPFL---TFLHHHCNRFASDLSSRFQDTTKRFAESLTTRRFS--PPPPFASVSQS 213
           SSVKPNPFL   +F+HH C RF+SDLS+R +D TKRFAE+L TRRFS   PPPFASVSQ 
Sbjct:   3 SSVKPNPFLSFSSFIHHQCTRFSSDLSARIED-TKRFAETLATRRFSLPTPPPFASVSQ- 60

Query: 214 SSKPSSPSTTLNPSHVAKALAGTSVFTVSNTNNEFVLISDPTGDKSIGLLCFRQEDAEAF 393
            SK  +P+TTL+PS VAKALAGTSVFTVSNTNNEFVLISDPTG KSIGLLCFRQEDAEAF
Sbjct:  61 -SKSGTPTTTLSPSLVAKALAGTSVFTVSNTNNEFVLISDPTGGKSIGLLCFRQEDAEAF 119

Query: 394 LAQARLRRRELKTNAKVVPINLDQVYLLKVEGISFRFLPDPIQIKNALELKSSSSKNGFD 573
           LAQARLRRRELKTNAKVVPI LDQVYLLKVEGISFRFLPDPIQIKNALELKSS +KNGFD
Sbjct: 120 LAQARLRRRELKTNAKVVPITLDQVYLLKVEGISFRFLPDPIQIKNALELKSSGNKNGFD 179

Query: 574 GVPVFQSELLVVRKKNKRYCPVYFSKEDIERELSKYSRASRGDQQIMVGSLEDVLRKMER 753
           GVPVFQSELLVVRKKN+RYCPVYFSKEDIERELSKY+RASRGDQQIMVGSLEDVLRKME 
Sbjct: 180 GVPVFQSELLVVRKKNRRYCPVYFSKEDIERELSKYTRASRGDQQIMVGSLEDVLRKMEM 239

Query: 754 SEKNSGWEDVIFIPPGRSYAQHMQEVIKE 840
           SEKNSGWEDVIFIPPGRSYAQHMQ++IKE
Sbjct: 240 SEKNSGWEDVIFIPPGRSYAQHMQDLIKE 268

>TAIR9_protein||AT3G23710.1 | Symbols:  | chloroplast inner membrane import
        protein Tic22, putative | chr3:8534061-8536148 FORWARD

          Length = 314

 Score =  143 bits (358), Expect = 3e-034
 Identities = 79/197 (40%), Positives = 122/197 (61%), Gaps = 14/197 (7%)
 Frame = +1

Query: 244 LNPSHVAKALAGTSVFTVSNTNNEFVLISDPTGDKSIGLLCFRQEDAEAFLAQAR-LRRR 420
           L+   + + LAG  V+ +SN+N EFVL+S  +  KS+GLL  ++EDAE  L + + +  R
Sbjct: 110 LSADAIEERLAGVPVYALSNSNEEFVLVSGTSSGKSLGLLFCKEEDAETLLKEMKSMDPR 169

Query: 421 ELKTNAKVVPINLDQVYLLKVEGISFRFLPDPIQIKNALELKSSS--SKNGFDGVPVFQS 594
             K  +KVV + L +V+ LKV G++FR +P+  Q+KNAL+ + ++    + F GVPVFQS
Sbjct: 170 MRKEGSKVVALALSKVFQLKVNGVAFRLIPESTQVKNALKERKTAGIDDDDFHGVPVFQS 229

Query: 595 ELLVVRKKNKRYCPVYFSKEDIERELSKYSRASR--------GDQQIMVGSLEDVLRKME 750
           + L++R +N  Y PV+F KED+E+ L + S            GD Q+ V   ED+++ M 
Sbjct: 230 KSLILRSENMSYRPVFFRKEDLEKSLIRASSQQNRLNPALKPGDIQVAV--FEDIVKGM- 286

Query: 751 RSEKNSGWEDVIFIPPG 801
           R    S W+D++FIPPG
Sbjct: 287 RESTTSNWDDIVFIPPG 303

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,319,083,204
Number of Sequences: 33410
Number of Extensions: 12319083204
Number of Successful Extensions: 397208598
Number of sequences better than 0.0: 0