BLASTX 7.6.2
Query= UN23843 /QuerySize=1119
(1118 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G61470.1 | Symbols: LHCA2 | LHCA2; chlorophyll... 519 1e-147
TAIR9_protein||AT1G19150.1 | Symbols: LHCA6, LHCA2*1 | LHCA6; ch... 313 1e-085
TAIR9_protein||AT3G47470.1 | Symbols: LHCA4, CAB4 | LHCA4 (LIGHT... 242 5e-064
TAIR9_protein||AT5G28450.1 | Symbols: | chlorophyll A-B binding... 214 9e-056
TAIR9_protein||AT1G45474.1 | Symbols: LHCA5 | LHCA5; pigment bin... 193 2e-049
TAIR9_protein||AT1G45474.2 | Symbols: LHCA5 | LHCA5; pigment bin... 193 2e-049
TAIR9_protein||AT3G54890.1 | Symbols: LHCA1 | LHCA1; chlorophyll... 145 7e-035
TAIR9_protein||AT1G29930.1 | Symbols: CAB1, AB140, CAB140, LHCB1... 141 8e-034
TAIR9_protein||AT2G34420.1 | Symbols: LHB1B2, LHCB1.5 | LHB1B2; ... 141 1e-033
TAIR9_protein||AT1G29910.1 | Symbols: CAB3, AB180, LHCB1.2 | CAB... 141 1e-033
TAIR9_protein||AT1G29920.1 | Symbols: CAB2, AB165, LHCB1.1 | CAB... 141 1e-033
TAIR9_protein||AT2G05070.1 | Symbols: LHCB2.2, LHCB2 | LHCB2.2; ... 139 3e-033
TAIR9_protein||AT2G05100.1 | Symbols: LHCB2.1, LHCB2 | LHCB2.1; ... 139 4e-033
TAIR9_protein||AT3G27690.1 | Symbols: LHCB2.4, LHCB2.3, LHCB2 | ... 136 4e-032
TAIR9_protein||AT2G34430.1 | Symbols: LHB1B1, LHCB1.4 | LHB1B1; ... 135 7e-032
TAIR9_protein||AT4G10340.1 | Symbols: LHCB5 | LHCB5 (LIGHT HARVE... 126 3e-029
TAIR9_protein||AT1G15820.1 | Symbols: LHCB6, CP24 | LHCB6 (LIGHT... 125 7e-029
TAIR9_protein||AT5G54270.1 | Symbols: LHCB3, LHCB3*1 | LHCB3 (LI... 119 4e-027
TAIR9_protein||AT3G54890.4 | Symbols: LHCA1 | LHCA1; chlorophyll... 110 2e-024
TAIR9_protein||AT1G61520.1 | Symbols: LHCA3 | LHCA3; chlorophyll... 107 1e-023
>TAIR9_protein||AT3G61470.1 | Symbols: LHCA2 | LHCA2; chlorophyll binding |
chr3:22745736-22747032 FORWARD
Length = 258
Score = 519 bits (1336), Expect = 1e-147
Identities = 246/256 (96%), Positives = 252/256 (98%)
Frame = +1
Query: 61 ASLCASSAIAAISSPSFLGGKKLRLNKKLSVPAVSKSAASVRAVAADPERPIWFPGSTPP 240
+SLCASSAIAAISSPSFLGGKKLRL KKL+VPAVS+ ASVRAVAADP+RPIWFPGSTPP
Sbjct: 3 SSLCASSAIAAISSPSFLGGKKLRLKKKLTVPAVSRPDASVRAVAADPDRPIWFPGSTPP 62
Query: 241 EWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFLTKIGILNT 420
EWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFLTKIGILNT
Sbjct: 63 EWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFLTKIGILNT 122
Query: 421 PSWYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDPIFPNNKLTGTDVG 600
PSWYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDP+FPNNKLTGTDVG
Sbjct: 123 PSWYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDPVFPNNKLTGTDVG 182
Query: 601 YPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHL 780
YPGGLWFDPLGWGSGSPAK+KELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHL
Sbjct: 183 YPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHL 242
Query: 781 ADPGHATIFAAFTPK* 828
ADPGHATIFAAFTPK*
Sbjct: 243 ADPGHATIFAAFTPK* 258
>TAIR9_protein||AT1G19150.1 | Symbols: LHCA6, LHCA2*1 | LHCA6; chlorophyll
binding | chr1:6612806-6613799 FORWARD
Length = 271
Score = 313 bits (801), Expect = 1e-085
Identities = 146/242 (60%), Positives = 178/242 (73%), Gaps = 3/242 (1%)
Frame = +1
Query: 94 ISSPSFLGGKKLRLNKKLSVPAVSKSAASVRAVAADPERPIWFPGSTPPEWLDGSLPGDF 273
++S S GG+ +R ++L V K +SV P+RP+WFPGS+PPEWLDGSLPGDF
Sbjct: 30 VASTSSTGGRLMR--ERLVVVRAGKEVSSV-CEPLPPDRPLWFPGSSPPEWLDGSLPGDF 86
Query: 274 GFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEY 453
GFDPLGL SDPD+LKW QAE++H RWAML GI IPE L ++G + SWY AG +EY
Sbjct: 87 GFDPLGLGSDPDTLKWFAQAELIHSRWAMLAVTGIIIPECLERLGFIENFSWYDAGSREY 146
Query: 454 FTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLG 633
F D TTLFV +++L+GWAEGRRWAD+IKPGSV+ +P +P+ DVGYPGGLWFD +
Sbjct: 147 FADSTTLFVAQMVLMGWAEGRRWADLIKPGSVDIEPKYPHKVNPKPDVGYPGGLWFDFMM 206
Query: 634 WGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAA 813
WG GSP + LRTKEIKNGRLAMLA +G FQ YT PI+NL AHLADPGH +F+A
Sbjct: 207 WGRGSPEPVMVLRTKEIKNGRLAMLAFLGFCFQATYTSQDPIENLMAHLADPGHCNVFSA 266
Query: 814 FT 819
FT
Sbjct: 267 FT 268
>TAIR9_protein||AT3G47470.1 | Symbols: LHCA4, CAB4 | LHCA4 (LIGHT-HARVESTING
CHLOROPHYLL-PROTEIN COMPLEX I SUBUNIT A4); chlorophyll binding |
chr3:17493622-17494773 REVERSE
Length = 252
Score = 242 bits (615), Expect = 5e-064
Identities = 122/236 (51%), Positives = 156/236 (66%), Gaps = 7/236 (2%)
Frame = +1
Query: 97 SSPSFLGGKKLRLNKKLSVPAVSKSAASVRAVAADPERPIWFPGSTPPEWLDGSLPGDFG 276
S P FL G RLN+ LS ++ S+A + + ++ W PG P++L GSL GD G
Sbjct: 18 SKPRFLTGSSGRLNRDLSFTSIG-SSAKTSSFKVEAKKGEWLPGLASPDYLTGSLAGDNG 76
Query: 277 FDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYF 456
FDPLGL+ DP++LKW VQAE+V+ RWAMLG AG+ +PE TKIGI+N P WY AG+++YF
Sbjct: 77 FDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPEWYDAGKEQYF 136
Query: 457 TDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGW 636
+TLFV+E IL + E RRW DI PGSVN DPIF L +VGYPGG+ F+PL +
Sbjct: 137 ASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGI-FNPLNF 195
Query: 637 GSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATI 804
A +E + KE+ NGRLAMLA +G QH TG GP +NL HL+DP H TI
Sbjct: 196 -----APTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHNTI 246
>TAIR9_protein||AT5G28450.1 | Symbols: | chlorophyll A-B binding protein,
chloroplast, putative / LHCI type II CAB, putative |
chr5:10372978-10374190 REVERSE
Length = 174
Score = 214 bits (544), Expect = 9e-056
Identities = 98/104 (94%), Positives = 100/104 (96%)
Frame = +1
Query: 517 RWADIIKPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGR 696
R DIIKPGSVNTDP+FPNNKLTGTD+GYPGGLWFDPLGWGSGSP KIKELRTKEIKNGR
Sbjct: 71 RAPDIIKPGSVNTDPVFPNNKLTGTDIGYPGGLWFDPLGWGSGSPTKIKELRTKEIKNGR 130
Query: 697 LAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPK* 828
LAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPK*
Sbjct: 131 LAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPK* 174
>TAIR9_protein||AT1G45474.1 | Symbols: LHCA5 | LHCA5; pigment binding |
chr1:17179353-17180439 FORWARD
Length = 257
Score = 193 bits (490), Expect = 2e-049
Identities = 101/204 (49%), Positives = 128/204 (62%), Gaps = 5/204 (2%)
Frame = +1
Query: 205 ERPIWFPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFI 384
ER W PG PP +LDG+L GD+GFDPLGL DP+SLKW VQAE+VH R+AMLG AGI
Sbjct: 45 ERATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAGILF 104
Query: 385 PEFLTKIGILNTPSWYTAGEQEY-FTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDP 561
+ L GI N P WY AG ++ F TL VV+ +L+G+AE +R+ D + PGS +
Sbjct: 105 TDLLRTTGIRNLPVWYEAGAVKFDFASTKTLIVVQFLLMGFAETKRYMDFVSPGSQAKEG 164
Query: 562 IF---PNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQ 732
F L G + GYPGG +PLG + + KEIKNGRLAM+A++G + Q
Sbjct: 165 SFFFGLEAALEGLEPGYPGGPLLNPLGLAK-DVQNAHDWKLKEIKNGRLAMMAMLGFFVQ 223
Query: 733 HIYTGTGPIDNLFAHLADPGHATI 804
T TGPIDNL HL++P H TI
Sbjct: 224 ASVTHTGPIDNLVEHLSNPWHKTI 247
>TAIR9_protein||AT1G45474.2 | Symbols: LHCA5 | LHCA5; pigment binding |
chr1:17179353-17180439 FORWARD
Length = 257
Score = 193 bits (490), Expect = 2e-049
Identities = 101/204 (49%), Positives = 128/204 (62%), Gaps = 5/204 (2%)
Frame = +1
Query: 205 ERPIWFPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFI 384
ER W PG PP +LDG+L GD+GFDPLGL DP+SLKW VQAE+VH R+AMLG AGI
Sbjct: 45 ERATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAGILF 104
Query: 385 PEFLTKIGILNTPSWYTAGEQEY-FTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDP 561
+ L GI N P WY AG ++ F TL VV+ +L+G+AE +R+ D + PGS +
Sbjct: 105 TDLLRTTGIRNLPVWYEAGAVKFDFASTKTLIVVQFLLMGFAETKRYMDFVSPGSQAKEG 164
Query: 562 IF---PNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQ 732
F L G + GYPGG +PLG + + KEIKNGRLAM+A++G + Q
Sbjct: 165 SFFFGLEAALEGLEPGYPGGPLLNPLGLAK-DVQNAHDWKLKEIKNGRLAMMAMLGFFVQ 223
Query: 733 HIYTGTGPIDNLFAHLADPGHATI 804
T TGPIDNL HL++P H TI
Sbjct: 224 ASVTHTGPIDNLVEHLSNPWHKTI 247
>TAIR9_protein||AT3G54890.1 | Symbols: LHCA1 | LHCA1; chlorophyll binding |
chr3:20339706-20340922 REVERSE
Length = 242
Score = 145 bits (364), Expect = 7e-035
Identities = 97/249 (38%), Positives = 128/249 (51%), Gaps = 35/249 (14%)
Frame = +1
Query: 76 SSAIAAISSPSFLGGKKLRLNKKLSVPAVSKSAASVRAVAADPERPIWFPGSTPPEWLDG 255
S IAA+ PS L K +K +S +A +V + W PG P +LDG
Sbjct: 8 SCGIAAV-YPSLLSSSK---SKFVSAGVPLPNAGNVGRIRMAAH---WMPGEPRPAYLDG 60
Query: 256 SLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFLTKIGILNTPSW-- 429
S PGDFGFDPLGL P +L+ ++E++HCRWAML GI +PE L + W
Sbjct: 61 SAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQEWAA 120
Query: 430 YTAGEQEYFTDKT------TLFVVELILIGWAEGRRWADIIKPGSVNTDPIFPNNKLTGT 591
G+ Y + T+ +E + I + E +R S+ DP
Sbjct: 121 LPGGQATYLGNPVPWGTLPTILAIEFLAIAFVEHQR--------SMEKDP---------E 163
Query: 592 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQH-IYTGTGPIDNL 768
YPGG FDPLG+ S P K++EL+ KEIKNGRLA+LA +G Q Y GTGP++NL
Sbjct: 164 KKKYPGGA-FDPLGY-SKDPKKLEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENL 221
Query: 769 FAHLADPGH 795
HLADP H
Sbjct: 222 ATHLADPWH 230
>TAIR9_protein||AT1G29930.1 | Symbols: CAB1, AB140, CAB140, LHCB1.3 | CAB1
(CHLOROPHYLL A/B BINDING PROTEIN 1); chlorophyll binding |
chr1:10478071-10478874 FORWARD
Length = 268
Score = 141 bits (355), Expect = 8e-034
Identities = 95/269 (35%), Positives = 136/269 (50%), Gaps = 30/269 (11%)
Frame = +1
Query: 76 SSAIAAISSPSFLGGKKLRLNKKLSVPAVSKSAASVRAVAADPERPIWFP---------- 225
+++ A+SSP+F GK ++L+ S + ++R A P+ P P
Sbjct: 2 AASTMALSSPAF-AGKAVKLSPAAS-EVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYL 59
Query: 226 ---GSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFL 396
P +L G PGD+G+D GLS+DP++ N + E++H RWAMLGA G PE L
Sbjct: 60 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 119
Query: 397 TKIGI-LNTPSWYTAGEQEY------FTDKTTLFVVELILIGWAEGRRWADIIKPGSVNT 555
+ G+ W+ AG Q + + +L + IL WA +I G+V
Sbjct: 120 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWA-----TQVILMGAVEG 174
Query: 556 DPIFPNNKL-TGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQ 732
+ N L D+ YPGG FDPLG + P EL+ KE+KNGRLAM ++ G + Q
Sbjct: 175 YRVAGNGPLGEAEDLLYPGGS-FDPLGLAT-DPEAFAELKVKELKNGRLAMFSMFGFFVQ 232
Query: 733 HIYTGTGPIDNLFAHLADPGHATIFAAFT 819
I TG GPI+NL HLADP + +A T
Sbjct: 233 AIVTGKGPIENLADHLADPVNNNAWAFAT 261
>TAIR9_protein||AT2G34420.1 | Symbols: LHB1B2, LHCB1.5 | LHB1B2; chlorophyll
binding | chr2:14522716-14523513 REVERSE
Length = 266
Score = 141 bits (354), Expect = 1e-033
Identities = 93/269 (34%), Positives = 134/269 (49%), Gaps = 32/269 (11%)
Frame = +1
Query: 76 SSAIAAISSPSFLGGKKLRLNKKLSVPAVSKSAASVRAVAADPERPIWFP---------- 225
+S+ A+SSP+F G + K + + ++R A P+ P P
Sbjct: 2 ASSTMALSSPAFAG----KAVKPAASDVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYL 57
Query: 226 ---GSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFL 396
PP +L G PGD+G+D GLS+DP++ N + E++H RWAMLGA G PE L
Sbjct: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 117
Query: 397 TKIGI-LNTPSWYTAGEQEY------FTDKTTLFVVELILIGWAEGRRWADIIKPGSVNT 555
+ G+ W+ AG Q + + +L + IL WA +I G+V
Sbjct: 118 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWA-----TQVILMGAVEG 172
Query: 556 DPIFPNNKL-TGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQ 732
+ + L D+ YPGG FDPLG + P EL+ KE+KNGRLAM ++ G + Q
Sbjct: 173 YRVAGDGPLGEAEDLLYPGGS-FDPLGLAT-DPEAFAELKVKELKNGRLAMFSMFGFFVQ 230
Query: 733 HIYTGTGPIDNLFAHLADPGHATIFAAFT 819
I TG GP++NL HLADP + +A T
Sbjct: 231 AIVTGKGPLENLADHLADPVNNNAWAFAT 259
>TAIR9_protein||AT1G29910.1 | Symbols: CAB3, AB180, LHCB1.2 | CAB3 (CHLOROPHYLL
A/B BINDING PROTEIN 3); chlorophyll binding | chr1:10472443-10473246
REVERSE
Length = 268
Score = 141 bits (353), Expect = 1e-033
Identities = 95/269 (35%), Positives = 135/269 (50%), Gaps = 30/269 (11%)
Frame = +1
Query: 76 SSAIAAISSPSFLGGKKLRLNKKLSVPAVSKSAASVRAVAADPERPIWFP---------- 225
+++ A+SSP+F GK + L+ S + ++R A P+ P P
Sbjct: 2 AASTMALSSPAF-AGKAVNLSPAAS-EVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYL 59
Query: 226 ---GSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFL 396
P +L G PGD+G+D GLS+DP++ N + E++H RWAMLGA G PE L
Sbjct: 60 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 119
Query: 397 TKIGI-LNTPSWYTAGEQEY------FTDKTTLFVVELILIGWAEGRRWADIIKPGSVNT 555
+ G+ W+ AG Q + + +L + IL WA +I G+V
Sbjct: 120 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWA-----TQVILMGAVEG 174
Query: 556 DPIFPNNKL-TGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQ 732
+ N L D+ YPGG FDPLG + P EL+ KE+KNGRLAM ++ G + Q
Sbjct: 175 YRVAGNGPLGEAEDLLYPGGS-FDPLGLAT-DPEAFAELKVKELKNGRLAMFSMFGFFVQ 232
Query: 733 HIYTGTGPIDNLFAHLADPGHATIFAAFT 819
I TG GPI+NL HLADP + +A T
Sbjct: 233 AIVTGKGPIENLADHLADPVNNNAWAFAT 261
>TAIR9_protein||AT1G29920.1 | Symbols: CAB2, AB165, LHCB1.1 | CAB2 (CHLOROPHYLL
A/B-BINDING PROTEIN 2); chlorophyll binding | chr1:10475089-10475892
REVERSE
Length = 268
Score = 141 bits (353), Expect = 1e-033
Identities = 95/269 (35%), Positives = 135/269 (50%), Gaps = 30/269 (11%)
Frame = +1
Query: 76 SSAIAAISSPSFLGGKKLRLNKKLSVPAVSKSAASVRAVAADPERPIWFP---------- 225
+++ A+SSP+F GK + L+ S + ++R A P+ P P
Sbjct: 2 AASTMALSSPAF-AGKAVNLSPAAS-EVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYL 59
Query: 226 ---GSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFL 396
P +L G PGD+G+D GLS+DP++ N + E++H RWAMLGA G PE L
Sbjct: 60 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 119
Query: 397 TKIGI-LNTPSWYTAGEQEY------FTDKTTLFVVELILIGWAEGRRWADIIKPGSVNT 555
+ G+ W+ AG Q + + +L + IL WA +I G+V
Sbjct: 120 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWA-----TQVILMGAVEG 174
Query: 556 DPIFPNNKL-TGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQ 732
+ N L D+ YPGG FDPLG + P EL+ KE+KNGRLAM ++ G + Q
Sbjct: 175 YRVAGNGPLGEAEDLLYPGGS-FDPLGLAT-DPEAFAELKVKELKNGRLAMFSMFGFFVQ 232
Query: 733 HIYTGTGPIDNLFAHLADPGHATIFAAFT 819
I TG GPI+NL HLADP + +A T
Sbjct: 233 AIVTGKGPIENLADHLADPVNNNAWAFAT 261
>TAIR9_protein||AT2G05070.1 | Symbols: LHCB2.2, LHCB2 | LHCB2.2; chlorophyll
binding | chr2:1799436-1800329 REVERSE
Length = 266
Score = 139 bits (350), Expect = 3e-033
Identities = 91/255 (35%), Positives = 123/255 (48%), Gaps = 26/255 (10%)
Frame = +1
Query: 82 AIAAISSPSFLGGKKLRLNKKL--SVPAVSKSAASVRAVAADPERPIWFPGSTP------ 237
A +AI SF G L+ + L V + ++R + IW+ P
Sbjct: 2 ATSAIQQSSFAGQTALKPSSDLIQKVGVLGGGRVTMRRTVKSTPQSIWYGPDRPKYLGPF 61
Query: 238 ----PEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFLTKI 405
P +L G PGD+G+D GLS+DP++ N + E++H RWAMLGA G PE L+K
Sbjct: 62 SENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSKN 121
Query: 406 GI-LNTPSWYTAGEQEY------FTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDPI 564
G+ W+ AG Q + + L + IL WA ++ G + I
Sbjct: 122 GVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA-----VQVVLMGFIEGYRI 176
Query: 565 FPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYT 744
G D YPGG FDPL P EL+ KE+KNGRLAM ++ G + Q I T
Sbjct: 177 GGGPLGEGLDPLYPGGA-FDPLNLAE-DPEAFSELKVKELKNGRLAMFSMFGFFVQAIVT 234
Query: 745 GTGPIDNLFAHLADP 789
G GPI+NLF HLADP
Sbjct: 235 GKGPIENLFDHLADP 249
>TAIR9_protein||AT2G05100.1 | Symbols: LHCB2.1, LHCB2 | LHCB2.1; chlorophyll
binding | chr2:1823449-1824331 REVERSE
Length = 266
Score = 139 bits (349), Expect = 4e-033
Identities = 91/255 (35%), Positives = 123/255 (48%), Gaps = 26/255 (10%)
Frame = +1
Query: 82 AIAAISSPSFLGGKKLRLNKKL--SVPAVSKSAASVRAVAADPERPIWFPGSTP------ 237
A +AI SF G L+ + +L V ++R + IW+ P
Sbjct: 2 ATSAIQQSSFAGQTALKPSNELLRKVGVSGGGRVTMRRTVKSTPQSIWYGPDRPKYLGPF 61
Query: 238 ----PEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFLTKI 405
P +L G PGD+G+D GLS+DP++ N + E++H RWAMLGA G PE L+K
Sbjct: 62 SENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSKN 121
Query: 406 GI-LNTPSWYTAGEQEY------FTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDPI 564
G+ W+ AG Q + + L + IL WA ++ G + I
Sbjct: 122 GVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA-----VQVVLMGFIEGYRI 176
Query: 565 FPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYT 744
G D YPGG FDPL P EL+ KE+KNGRLAM ++ G + Q I T
Sbjct: 177 GGGPLGEGLDPLYPGGA-FDPLNLAE-DPEAFSELKVKELKNGRLAMFSMFGFFVQAIVT 234
Query: 745 GTGPIDNLFAHLADP 789
G GPI+NLF HLADP
Sbjct: 235 GKGPIENLFDHLADP 249
>TAIR9_protein||AT3G27690.1 | Symbols: LHCB2.4, LHCB2.3, LHCB2 | LHCB2.3;
chlorophyll binding | chr3:10256002-10256921 FORWARD
Length = 267
Score = 136 bits (340), Expect = 4e-032
Identities = 92/257 (35%), Positives = 124/257 (48%), Gaps = 29/257 (11%)
Frame = +1
Query: 82 AIAAISSPSFLGGKKLR----LNKKLSVPAVSKSAASVRAVAADPERPIWFPGSTP---- 237
A +AI SF G L+ L +K+ R V + P+ IW+ P
Sbjct: 2 ATSAIQHSSFAGQTTLKPSNDLLRKIGASNGGGRIIMRRTVKSTPQ-SIWYGPDRPKYLG 60
Query: 238 ------PEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFLT 399
P +L G PGD+G+D GLS+DP++ N + E++H RWAMLGA G PE L+
Sbjct: 61 PFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILS 120
Query: 400 KIGI-LNTPSWYTAGEQEY------FTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTD 558
K G+ W+ AG Q + + L + IL WA ++ G +
Sbjct: 121 KNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA-----CQVVLMGFIEGY 175
Query: 559 PIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHI 738
I G D YPGG FDPL P EL+ KE+KNGRLAM ++ G + Q I
Sbjct: 176 RIGGGPLGEGLDPLYPGGA-FDPLNLAE-DPEAFSELKVKELKNGRLAMFSMFGFFVQAI 233
Query: 739 YTGTGPIDNLFAHLADP 789
TG GPI+NLF H+ADP
Sbjct: 234 VTGKGPIENLFDHIADP 250
>TAIR9_protein||AT2G34430.1 | Symbols: LHB1B1, LHCB1.4 | LHB1B1; chlorophyll
binding | chr2:14524818-14525618 FORWARD
Length = 267
Score = 135 bits (338), Expect = 7e-032
Identities = 94/269 (34%), Positives = 135/269 (50%), Gaps = 31/269 (11%)
Frame = +1
Query: 76 SSAIAAISSPSFLGGKKLRLNKKLSVPAVSKSAASVRAVAADPERPIWFP---------- 225
+++ A+SSP+ L GK ++L+ S V + A+ P P P
Sbjct: 2 AASTMALSSPA-LTGKAVKLSPAAS--EVFGTGRITMRKASKPTGPSGSPWYGSDRVKYL 58
Query: 226 ---GSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFL 396
PP +L G PGD+G+D GLS+DP++ N + E++H RWAMLGA G PE L
Sbjct: 59 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 118
Query: 397 TKIGI-LNTPSWYTAGEQEY------FTDKTTLFVVELILIGWAEGRRWADIIKPGSVNT 555
+ G+ W+ AG Q + + +L + IL WA +I G+V
Sbjct: 119 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWA-----TQVILMGAVEG 173
Query: 556 DPIFPNNKL-TGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQ 732
+ + L D+ YPGG FDPLG + P EL+ KE+KNGRLAM ++ G + Q
Sbjct: 174 YRVAGDGPLGEAEDLLYPGGS-FDPLGLAT-DPEAFAELKVKELKNGRLAMFSMFGFFVQ 231
Query: 733 HIYTGTGPIDNLFAHLADPGHATIFAAFT 819
I TG GP++NL HLADP + +A T
Sbjct: 232 AIVTGKGPLENLADHLADPVNNNAWAFAT 260
>TAIR9_protein||AT4G10340.1 | Symbols: LHCB5 | LHCB5 (LIGHT HARVESTING COMPLEX
OF PHOTOSYSTEM II 5); chlorophyll binding | chr4:6408200-6409496
FORWARD
Length = 281
Score = 126 bits (316), Expect = 3e-029
Identities = 95/259 (36%), Positives = 124/259 (47%), Gaps = 41/259 (15%)
Frame = +1
Query: 79 SAIAAISSPSFLGGKKLRLNKKLSVPAVSKSAASVRAVAA---DPERPIWFPG-----ST 234
S+ SSPS L +KK PA SK+ + A P+R I+ P S
Sbjct: 22 SSAPLASSPSTFKTVAL-FSKKKPAPAKSKAVSETSDELAKWYGPDRRIFLPDGLLDRSE 80
Query: 235 PPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFLTKIGIL 414
PE+L+G + GD+G+DP GL P++ E++H RWAMLGAAG IPE L K G
Sbjct: 81 IPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGAN 140
Query: 415 NTPS--WYTAG-------EQEYFTDKTTL-----FVVELILIGWAEGRRWADIIKPGSVN 552
P W+ G YF + V E++L+G AE R
Sbjct: 141 CGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYR----------- 189
Query: 553 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQ 732
N L D +PGG FDPLG P + L+ KEIKNGRLAM A++G + Q
Sbjct: 190 -----ITNGLDFEDKLHPGGP-FDPLGLAK-DPEQGALLKVKEIKNGRLAMFAMLGFFIQ 242
Query: 733 HIYTGTGPIDNLFAHLADP 789
TG GP++NL HL+DP
Sbjct: 243 AYVTGEGPVENLAKHLSDP 261
>TAIR9_protein||AT1G15820.1 | Symbols: LHCB6, CP24 | LHCB6 (LIGHT HARVESTING
COMPLEX PSII SUBUNIT 6); chlorophyll binding | chr1:5446685-5447676
REVERSE
Length = 259
Score = 125 bits (312), Expect = 7e-029
Identities = 75/197 (38%), Positives = 103/197 (52%), Gaps = 24/197 (12%)
Frame = +1
Query: 160 VSKSAASVRAVAADPERPIWFP------GSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKW 321
V + V A AA P++ W P PEWLDGSLPGDFGFDPLGL DP LKW
Sbjct: 39 VGRKTLIVAAAAAQPKKS-WIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKW 97
Query: 322 NVQAEIVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFT---DKTTLFVVELI 492
+AE++H RWAM GIF+ + + + +W+ AG Q +L +L+
Sbjct: 98 YREAELIHGRWAMAAVLGIFVGQAWSGV------AWFEAGAQPDAIAPFSFGSLLGTQLL 151
Query: 493 LIGWAEGRRWADIIKPGSVNTDPIFPNNK-------LTGTDVGYPGGLWFDPLGWGSGSP 651
L+GW E +RW D P S + + P +K TG D GYPGG +FDPLG +
Sbjct: 152 LMGWVESKRWVDFFNPDSQSVEWATPWSKTAENFANYTG-DQGYPGGRFFDPLGLAGKNR 210
Query: 652 AKIKELRTKEIKNGRLA 702
+ E ++++ +LA
Sbjct: 211 DGVYEPDFEKLERLKLA 227
>TAIR9_protein||AT5G54270.1 | Symbols: LHCB3, LHCB3*1 | LHCB3 (LIGHT-HARVESTING
CHLOROPHYLL B-BINDING PROTEIN 3); structural molecule |
chr5:22038424-22039383 FORWARD
Length = 266
Score = 119 bits (297), Expect = 4e-027
Identities = 77/190 (40%), Positives = 100/190 (52%), Gaps = 10/190 (5%)
Frame = +1
Query: 238 PEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFLTK-IGI- 411
P +L G PGD+G+D GLS+DP++ N E++H RWAMLGA G PE L K + +
Sbjct: 64 PSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLQKWVRVD 123
Query: 412 LNTPSWYTAGEQEYFTDKTT-LFVVELILIGWAEGRRWADIIKPGSVNTDPIFPNNKLTG 588
P W+ AG Q + L L+ +I G V F N L G
Sbjct: 124 FKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEG---FRINGLDG 180
Query: 589 TDVG---YPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPI 759
G YPGG +FDPLG + P EL+ KEIKNGRLAM ++ G + Q I TG GP+
Sbjct: 181 VGEGNDLYPGGQYFDPLGL-ADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 239
Query: 760 DNLFAHLADP 789
+NL HL +P
Sbjct: 240 ENLLDHLDNP 249
>TAIR9_protein||AT3G54890.4 | Symbols: LHCA1 | LHCA1; chlorophyll binding |
chr3:20339881-20340922 REVERSE
Length = 214
Score = 110 bits (273), Expect = 2e-024
Identities = 77/215 (35%), Positives = 105/215 (48%), Gaps = 34/215 (15%)
Frame = +1
Query: 76 SSAIAAISSPSFLGGKKLRLNKKLSVPAVSKSAASVRAVAADPERPIWFPGSTPPEWLDG 255
S IAA+ PS L K +K +S +A +V + W PG P +LDG
Sbjct: 8 SCGIAAV-YPSLLSSSK---SKFVSAGVPLPNAGNVGRIRMAAH---WMPGEPRPAYLDG 60
Query: 256 SLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFLTKIGILNTPSW-- 429
S PGDFGFDPLGL P +L+ ++E++HCRWAML GI +PE L + W
Sbjct: 61 SAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQEWAA 120
Query: 430 YTAGEQEYFTDKT------TLFVVELILIGWAEGRRWADIIKPGSVNTDPIFPNNKLTGT 591
G+ Y + T+ +E + I + E +R S+ DP
Sbjct: 121 LPGGQATYLGNPVPWGTLPTILAIEFLAIAFVEHQR--------SMEKDP---------E 163
Query: 592 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGR 696
YPGG FDPLG+ S P K++EL+ KEIKNG+
Sbjct: 164 KKKYPGGA-FDPLGY-SKDPKKLEELKVKEIKNGK 196
>TAIR9_protein||AT1G61520.1 | Symbols: LHCA3 | LHCA3; chlorophyll binding |
chr1:22700152-22701149 FORWARD
Length = 274
Score = 107 bits (267), Expect = 1e-023
Identities = 65/146 (44%), Positives = 87/146 (59%), Gaps = 5/146 (3%)
Frame = +1
Query: 358 MLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIK 537
+LG AG+ E T + T AG Y+ D TLFV+E+ L+G+AE RR D
Sbjct: 119 ILGKAGLIPAE--TALPWFQTGVIPPAGTYTYWADNYTLFVLEMALMGFAEHRRLQDWYN 176
Query: 538 PGSVNTDPIFPNNK-LTGT-DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLA 711
PGS+ K L G+ + YPGG +F+PLG+G + +KEL+ KE+KNGRLAMLA
Sbjct: 177 PGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKDEKS-LKELKLKEVKNGRLAMLA 235
Query: 712 VMGAWFQHIYTGTGPIDNLFAHLADP 789
++G + Q + TG GP NL HLADP
Sbjct: 236 ILGYFIQGLVTGVGPYQNLLDHLADP 261
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,319,083,204
Number of Sequences: 33410
Number of Extensions: 12319083204
Number of Successful Extensions: 397208598
Number of sequences better than 0.0: 0
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