BLASTX 7.6.2

Query= UN23861 /QuerySize=446
        (445 letters)

Database: UniProt/SwissProt;
          518,415 sequences; 182,829,261 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|Q3ZBC0|RPAB4_BOVIN DNA-directed RNA polymerases I, II, and II...     69   1e-011
sp|P53803|RPAB4_HUMAN DNA-directed RNA polymerases I, II, and II...     69   1e-011
sp|Q63871|RPAB4_MOUSE DNA-directed RNA polymerases I, II, and II...     69   1e-011
sp|P48011|RPAB4_SCHPO DNA-directed RNA polymerases I, II, and II...     69   1e-011
sp|Q54R66|RPAB4_DICDI DNA-directed RNA polymerases I, II, and II...     57   3e-008

>sp|Q3ZBC0|RPAB4_BOVIN DNA-directed RNA polymerases I, II, and III subunit
        RPABC4 OS=Bos taurus GN=POLR2K PE=3 SV=1

          Length = 58

 Score =  69 bits (167), Expect = 1e-011
 Identities = 30/53 (56%), Positives = 41/53 (77%), Gaps = 3/53 (5%)
 Frame = +2

Query: 113 DQQP---EPVTYVCEDCGQENTLKSGDVIQCRECGYRILYKKRTRRVVQYEAR 262
           D QP   +P+ Y+C +C  EN +KS D I+CRECGYRI+YKKRT+R+V ++AR
Sbjct:   6 DVQPPKQQPMIYICGECHTENEIKSRDPIRCRECGYRIMYKKRTKRLVVFDAR 58

>sp|P53803|RPAB4_HUMAN DNA-directed RNA polymerases I, II, and III subunit
        RPABC4 OS=Homo sapiens GN=POLR2K PE=2 SV=1

          Length = 58

 Score =  69 bits (167), Expect = 1e-011
 Identities = 30/53 (56%), Positives = 41/53 (77%), Gaps = 3/53 (5%)
 Frame = +2

Query: 113 DQQP---EPVTYVCEDCGQENTLKSGDVIQCRECGYRILYKKRTRRVVQYEAR 262
           D QP   +P+ Y+C +C  EN +KS D I+CRECGYRI+YKKRT+R+V ++AR
Sbjct:   6 DVQPPKQQPMIYICGECHTENEIKSRDPIRCRECGYRIMYKKRTKRLVVFDAR 58

>sp|Q63871|RPAB4_MOUSE DNA-directed RNA polymerases I, II, and III subunit
        RPABC4 OS=Mus musculus GN=Polr2k PE=2 SV=2

          Length = 58

 Score =  69 bits (167), Expect = 1e-011
 Identities = 30/53 (56%), Positives = 41/53 (77%), Gaps = 3/53 (5%)
 Frame = +2

Query: 113 DQQP---EPVTYVCEDCGQENTLKSGDVIQCRECGYRILYKKRTRRVVQYEAR 262
           D QP   +P+ Y+C +C  EN +KS D I+CRECGYRI+YKKRT+R+V ++AR
Sbjct:   6 DVQPPKQQPMIYICGECHTENEIKSRDPIRCRECGYRIMYKKRTKRLVVFDAR 58

>sp|P48011|RPAB4_SCHPO DNA-directed RNA polymerases I, II, and III subunit
        RPABC4 OS=Schizosaccharomyces pombe GN=rpc10 PE=1 SV=2

          Length = 63

 Score =  69 bits (167), Expect = 1e-011
 Identities = 26/48 (54%), Positives = 40/48 (83%)
 Frame = +2

Query: 119 QPEPVTYVCEDCGQENTLKSGDVIQCRECGYRILYKKRTRRVVQYEAR 262
           +P  + Y+C DCG  NT+++ +VI+CRECG+R++YK RT+R+VQ+EAR
Sbjct:  16 RPATMIYLCADCGARNTIQAKEVIRCRECGHRVMYKMRTKRMVQFEAR 63

>sp|Q54R66|RPAB4_DICDI DNA-directed RNA polymerases I, II, and III subunit
        rpabc4 OS=Dictyostelium discoideum GN=polr2k PE=3 SV=1

          Length = 46

 Score =  57 bits (137), Expect = 3e-008
 Identities = 20/45 (44%), Positives = 35/45 (77%)
 Frame = +2

Query: 128 PVTYVCEDCGQENTLKSGDVIQCRECGYRILYKKRTRRVVQYEAR 262
           P  Y+C +CG E+ +K  + ++C++C +RI+YKKRT +++Q+EAR
Sbjct:   2 PCLYICGECGAEHEIKPKEPVKCKDCTHRIMYKKRTDKMIQFEAR 46

  Database: UniProt/SwissProt
    Posted date:  Sat Aug 07 14:36:18 2010
  Number of letters in database: 182,829,261
  Number of sequences in database:  518,415

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,767,994,010
Number of Sequences: 518415
Number of Extensions: 98767994010
Number of Successful Extensions: 632508636
Number of sequences better than 0.0: 0