BLASTX 7.6.2
Query= UN23906 /QuerySize=890
(889 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G42765.1 | Symbols: | INVOLVED IN: biological... 322 2e-088
>TAIR9_protein||AT5G42765.1 | Symbols: | INVOLVED IN: biological_process
unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane,
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Twin-arginine translocation
pathway signal (InterPro:IPR006311); Has 13 Blast hits to 13 proteins
in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants
- 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr5:17150505-17151641 REVERSE
Length = 230
Score = 322 bits (824), Expect = 2e-088
Identities = 175/231 (75%), Positives = 197/231 (85%), Gaps = 6/231 (2%)
Frame = +2
Query: 17 MASSALILRPFFSSLTQTCQAP--ISARTSDHHPHTLSRRDA-LSLSSASLLLFSLSPTD 187
MA I +PFFSS T+ P +A+ SDH P +SRRDA + LSSA+ LL +LSPT+
Sbjct: 1 MARLIPISQPFFSSNTKPPPPPPIAAAQISDHLPQIISRRDATVLLSSATSLLLTLSPTN 60
Query: 188 PALAF--GISGPKEWLKDQKKKSSRFLLAPIDASRESLRSVYLSLSTRESDYTDKDLESL 361
PA AF GISGPKEWLKDQKKKSSRFLLAPIDA+R++L+S YLSL T ESDYT+KDLE+L
Sbjct: 61 PAFAFSLGISGPKEWLKDQKKKSSRFLLAPIDATRQALQSAYLSL-TSESDYTEKDLENL 119
Query: 362 QNLLRSSARDCVPKERSSLVDFQSKTGVEVCTFKLVLKNAASLLDDKDPVILEAENILND 541
QNL +SSARDCVPKERSSLVDFQSK+GVEVCTFKLV+KNAASLLDDKDPV LEAENIL+D
Sbjct: 120 QNLFKSSARDCVPKERSSLVDFQSKSGVEVCTFKLVVKNAASLLDDKDPVKLEAENILDD 179
Query: 542 LVRSFGSLIVLTNGIDMNLPSDRKKIADAVMESISVLDKFEKSVKDCLEI* 694
LVRSFGSLIVLTNG+DMNLPSDRKK+AD V E+IS LDKFEK VKDCLEI*
Sbjct: 180 LVRSFGSLIVLTNGVDMNLPSDRKKVADGVTETISYLDKFEKGVKDCLEI* 230
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,319,083,204
Number of Sequences: 33410
Number of Extensions: 12319083204
Number of Successful Extensions: 397208598
Number of sequences better than 0.0: 0
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