BLASTX 7.6.2
Query= UN24006 /QuerySize=605
(604 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G56070.1 | Symbols: LOS1 | LOS1; copper ion bi... 246 9e-066
TAIR9_protein||AT3G12915.1 | Symbols: | GTP binding / GTPase | ... 246 9e-066
TAIR9_protein||AT1G06220.2 | Symbols: MEE5 | MEE5 (MATERNAL EFFE... 113 1e-025
TAIR9_protein||AT1G06220.1 | Symbols: MEE5, CLO, GFA1 | MEE5 (MA... 113 1e-025
TAIR9_protein||AT5G25230.1 | Symbols: | elongation factor Tu fa... 111 6e-025
TAIR9_protein||AT3G22980.1 | Symbols: | elongation factor Tu fa... 83 1e-016
>TAIR9_protein||AT1G56070.1 | Symbols: LOS1 | LOS1; copper ion binding /
translation elongation factor/ translation factor, nucleic acid binding
| chr1:20968245-20971077 REVERSE
Length = 844
Score = 246 bits (627), Expect = 9e-066
Identities = 120/129 (93%), Positives = 125/129 (96%)
Frame = -3
Query: 602 ASQLTAKPRLLEPVYMVEIQAPEGALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPV 423
ASQ+TAKPRLLEPVYMVEIQAPEGALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPV
Sbjct: 716 ASQITAKPRLLEPVYMVEIQAPEGALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPV 775
Query: 422 VKSFGFSSQLRAATSGQAFPQCVFDHWEMMSSDPLEAGSQASTLVADIRKRKGMKEQMTP 243
V+SFGFSSQLRAATSGQAFPQCVFDHWEMMSSDPLE G+QAS LVADIRKRKG+KE MTP
Sbjct: 776 VESFGFSSQLRAATSGQAFPQCVFDHWEMMSSDPLEPGTQASVLVADIRKRKGLKEAMTP 835
Query: 242 LSDFEDKL* 216
LS+FEDKL*
Sbjct: 836 LSEFEDKL* 844
>TAIR9_protein||AT3G12915.1 | Symbols: | GTP binding / GTPase |
chr3:4112999-4115708 FORWARD
Length = 821
Score = 246 bits (627), Expect = 9e-066
Identities = 120/129 (93%), Positives = 125/129 (96%)
Frame = -3
Query: 602 ASQLTAKPRLLEPVYMVEIQAPEGALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPV 423
ASQLTAKPRLLEPVYMVEIQAPEGALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPV
Sbjct: 693 ASQLTAKPRLLEPVYMVEIQAPEGALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPV 752
Query: 422 VKSFGFSSQLRAATSGQAFPQCVFDHWEMMSSDPLEAGSQASTLVADIRKRKGMKEQMTP 243
V+SFGFS QLRAATSGQAFPQCVFDHW+MMSSDPLE GSQA+TLVADIRKRKG+K QMTP
Sbjct: 753 VESFGFSGQLRAATSGQAFPQCVFDHWDMMSSDPLETGSQAATLVADIRKRKGLKLQMTP 812
Query: 242 LSDFEDKL* 216
LSD+EDKL*
Sbjct: 813 LSDYEDKL* 821
>TAIR9_protein||AT1G06220.2 | Symbols: MEE5 | MEE5 (MATERNAL EFFECT EMBRYO
ARREST 5); GTP binding / GTPase/ translation elongation factor/
translation factor, nucleic acid binding | chr1:1900524-1904583
FORWARD
Length = 988
Score = 113 bits (281), Expect = 1e-025
Identities = 53/101 (52%), Positives = 70/101 (69%)
Frame = -3
Query: 593 LTAKPRLLEPVYMVEIQAPEGALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVKS 414
L A PRL+EPVY VEIQ P + IY+VL+++RGHV ++ +PGTP Y +KA+LPV++S
Sbjct: 835 LMATPRLMEPVYYVEIQTPIDCVTAIYTVLSRRRGHVTSDVPQPGTPAYIVKAFLPVIES 894
Query: 413 FGFSSQLRAATSGQAFPQCVFDHWEMMSSDPLEAGSQASTL 291
FGF + LR T GQAF VFDHW ++ DPL+ Q L
Sbjct: 895 FGFETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKAIQLRPL 935
>TAIR9_protein||AT1G06220.1 | Symbols: MEE5, CLO, GFA1 | MEE5 (MATERNAL EFFECT
EMBRYO ARREST 5); GTP binding / GTPase/ translation elongation factor/
translation factor, nucleic acid binding | chr1:1900524-1904583
FORWARD
Length = 988
Score = 113 bits (281), Expect = 1e-025
Identities = 53/101 (52%), Positives = 70/101 (69%)
Frame = -3
Query: 593 LTAKPRLLEPVYMVEIQAPEGALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVKS 414
L A PRL+EPVY VEIQ P + IY+VL+++RGHV ++ +PGTP Y +KA+LPV++S
Sbjct: 835 LMATPRLMEPVYYVEIQTPIDCVTAIYTVLSRRRGHVTSDVPQPGTPAYIVKAFLPVIES 894
Query: 413 FGFSSQLRAATSGQAFPQCVFDHWEMMSSDPLEAGSQASTL 291
FGF + LR T GQAF VFDHW ++ DPL+ Q L
Sbjct: 895 FGFETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKAIQLRPL 935
>TAIR9_protein||AT5G25230.1 | Symbols: | elongation factor Tu family protein |
chr5:8739709-8743594 FORWARD
Length = 974
Score = 111 bits (275), Expect = 6e-025
Identities = 52/101 (51%), Positives = 70/101 (69%)
Frame = -3
Query: 593 LTAKPRLLEPVYMVEIQAPEGALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVKS 414
L A PRL+EPVY VEIQ P + IY+VL+++RG+V ++ +PGTP Y +KA+LPV++S
Sbjct: 821 LMATPRLMEPVYYVEIQTPIDCVTAIYTVLSRRRGYVTSDVPQPGTPAYIVKAFLPVIES 880
Query: 413 FGFSSQLRAATSGQAFPQCVFDHWEMMSSDPLEAGSQASTL 291
FGF + LR T GQAF VFDHW ++ DPL+ Q L
Sbjct: 881 FGFETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKAIQLRPL 921
>TAIR9_protein||AT3G22980.1 | Symbols: | elongation factor Tu family protein |
chr3:8160269-8163316 REVERSE
Length = 1016
Score = 83 bits (203), Expect = 1e-016
Identities = 37/94 (39%), Positives = 58/94 (61%)
Frame = -3
Query: 602 ASQLTAKPRLLEPVYMVEIQAPEGALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPV 423
A+ L PR++E +Y E+ LG +Y+VL+++R + +E + G+ L+ + AY+PV
Sbjct: 865 AAVLQTNPRIVEAMYFCELNTAPEYLGPMYAVLSRRRARILKEEMQEGSSLFTVHAYVPV 924
Query: 422 VKSFGFSSQLRAATSGQAFPQCVFDHWEMMSSDP 321
+SFGF+ +LR TSG A V HWEM+ DP
Sbjct: 925 SESFGFADELRKGTSGGASALMVLSHWEMLEEDP 958
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,362,640,836
Number of Sequences: 33410
Number of Extensions: 12362640836
Number of Successful Extensions: 397243349
Number of sequences better than 0.0: 0
|
