BLASTX 7.6.2
Query= UN24017 /QuerySize=1031
(1030 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|18420676|ref|NP_568431.1| high-mobility group B6 protein [Ara... 322 6e-086
gi|297812491|ref|XP_002874129.1| hypothetical protein ARALYDRAFT... 268 1e-069
gi|297812105|ref|XP_002873936.1| hypothetical protein ARALYDRAFT... 259 6e-067
gi|9759080|dbj|BAB09558.1| unnamed protein product [Arabidopsis ... 235 9e-060
gi|224097317|ref|XP_002310906.1| high mobility group family [Pop... 215 2e-053
gi|225463777|ref|XP_002267697.1| PREDICTED: hypothetical protein... 206 6e-051
gi|255544145|ref|XP_002513135.1| DNA-binding protein MNB1B, puta... 205 2e-050
gi|147815109|emb|CAN61363.1| hypothetical protein VITISV_034306 ... 197 3e-048
gi|255628875|gb|ACU14782.1| unknown [Glycine max] 191 1e-046
gi|334187856|ref|NP_001190371.1| high-mobility group B6 protein ... 126 1e-026
gi|126327421|ref|XP_001367294.1| PREDICTED: high mobility group ... 96 8e-018
gi|8393536|ref|NP_058883.1| high mobility group protein B2 [Ratt... 91 3e-016
gi|600761|gb|AAA57042.1| high mobility group 1 protein [Mus musc... 91 3e-016
gi|334323271|ref|XP_003340370.1| PREDICTED: high mobility group ... 91 3e-016
gi|149060359|gb|EDM11073.1| rCG63620 [Rattus norvegicus] 91 3e-016
gi|291415754|ref|XP_002724114.1| PREDICTED: high-mobility group ... 91 3e-016
gi|194208319|ref|XP_001498869.2| PREDICTED: high mobility group ... 91 4e-016
gi|241122588|ref|XP_002403591.1| DNA-binding protein, putative [... 90 5e-016
gi|73993609|ref|XP_543194.2| PREDICTED: similar to high-mobility... 89 8e-016
gi|297674678|ref|XP_002815340.1| PREDICTED: high mobility group ... 89 8e-016
>gi|18420676|ref|NP_568431.1| high-mobility group B6 protein [Arabidopsis
thaliana]
Length = 241
Score = 322 bits (825), Expect = 6e-086
Identities = 179/245 (73%), Positives = 195/245 (79%), Gaps = 19/245 (7%)
Frame = +3
Query: 81 STAPKARKRVDVETKPETTANNNNNINTLLRAKDGSAFVRCEGCNKNVAVALISMHNCSL 260
S APK RKRV+ ET ++N TL RAKDGSAF CEGCNK+VAVALISMHNCSL
Sbjct: 8 SNAPKQRKRVEAET-------SSNTSTTLRRAKDGSAFALCEGCNKSVAVALISMHNCSL 60
Query: 261 DAKIRVNLEAQVVETQTEAKKKPAERKKSTSDEPKAKRVRKAKDENKKKSSSSSSNKPKR 440
DAKIRVNLEAQVVETQ EAKKKPAE+KK+TSD PK KR++K DE K SSS+SNKPKR
Sbjct: 61 DAKIRVNLEAQVVETQAEAKKKPAEKKKTTSDGPKPKRLKKTNDE---KKSSSTSNKPKR 117
Query: 441 PLTAFFIFMSDFRKTFKEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNK 620
PLTAFFIFMSDFRKTFK E+ + KD AK GGEKWKSL EEEKKVYLDKAAELK EYNK
Sbjct: 118 PLTAFFIFMSDFRKTFKSEHNGSLAKDAAKIGGEKWKSLTEEEKKVYLDKAAELKAEYNK 177
Query: 621 SLESSNDADEEEVDEEKEATDVDDADEKK--QTDEAEENEGEN-----KEAEGK-EEEDE 776
SLE SNDADEEE DEEK++ DVDDA+EK+ DE EE E EN KEAEGK EEE+E
Sbjct: 178 SLE-SNDADEEEEDEEKQSDDVDDAEEKQVDDDDEVEEKEVENTDDDKKEAEGKEEEEEE 236
Query: 777 ILDDY 791
ILDDY
Sbjct: 237 ILDDY 241
>gi|297812491|ref|XP_002874129.1| hypothetical protein ARALYDRAFT_910356
[Arabidopsis lyrata subsp. lyrata]
Length = 193
Score = 268 bits (684), Expect = 1e-069
Identities = 144/191 (75%), Positives = 155/191 (81%), Gaps = 11/191 (5%)
Frame = +3
Query: 81 STAPKARKRVDVETKPETTANNNNNINTLLRAKDGSAFVRCEGCNKNVAVALISMHNCSL 260
S APK RKRV+ ET + N TL RAKDGSAF CEGCNK+VAVALISMHNCSL
Sbjct: 8 SNAPKQRKRVEAET-------STNTSTTLRRAKDGSAFALCEGCNKSVAVALISMHNCSL 60
Query: 261 DAKIRVNLEAQVVETQTEAKKKPAERKKSTSDEPKAKRVRKAKDENKKKSSSSSSNKPKR 440
DAKIRVNLEAQVVETQ EAKKKPAE+KK+TSD PK KR++K DE K SSS+SNKPKR
Sbjct: 61 DAKIRVNLEAQVVETQAEAKKKPAEKKKTTSDGPKPKRLKKTNDE---KKSSSTSNKPKR 117
Query: 441 PLTAFFIFMSDFRKTFKEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNK 620
PLTAFFIFM+DFRKTFK E+ + KD AK GGEKWKSL EEEKKVYLDKAAELK EYNK
Sbjct: 118 PLTAFFIFMNDFRKTFKTEHNGSLAKDAAKIGGEKWKSLTEEEKKVYLDKAAELKAEYNK 177
Query: 621 SLESSNDADEE 653
SLE SNDADEE
Sbjct: 178 SLE-SNDADEE 187
>gi|297812105|ref|XP_002873936.1| hypothetical protein ARALYDRAFT_488801
[Arabidopsis lyrata subsp. lyrata]
Length = 224
Score = 259 bits (661), Expect = 6e-067
Identities = 145/225 (64%), Positives = 168/225 (74%), Gaps = 21/225 (9%)
Frame = +3
Query: 99 RKRVDVETKPETTANNNNNINTLLRAKDGSAFVRCEGCNKNVAVALISMHNCSLDAKIRV 278
RKRV+ ET ++NN TL RAKDGSAF CEGCNK+VAVALISMHNCSLDAKIR
Sbjct: 14 RKRVEAET------SSNNTSTTLRRAKDGSAFALCEGCNKSVAVALISMHNCSLDAKIR- 66
Query: 279 NLEAQVVETQTEAKKKPAERKKSTSDEPKAKRVRKAKDENKKKSSSSSSNKPKRPLTAFF 458
AQVVETQ EAKKKPAE+KK+T+D PK KR++K DE K SSS+SNKPKRPLTAFF
Sbjct: 67 ---AQVVETQAEAKKKPAEKKKATADGPKPKRLKKTNDE---KKSSSTSNKPKRPLTAFF 120
Query: 459 IFMSDFRKTFKEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSLESSN 638
IFM+DFRKTFK E+ + KD AK GGEKW SL E+EKKVYLDKAAELK EYNK +
Sbjct: 121 IFMNDFRKTFKTEHNGSFAKDAAKIGGEKWMSLTEDEKKVYLDKAAELKAEYNK----RS 176
Query: 639 DADEEEVDEEKEATDVDDADEKKQTDEAEENEGENKEAEGKEEED 773
+ + EEKEA D D+A+EK E E+ ++KEAEGKEEE+
Sbjct: 177 NLMMLMMLEEKEADDADEAEEK----EVEKTNDDSKEAEGKEEEE 217
>gi|9759080|dbj|BAB09558.1| unnamed protein product [Arabidopsis thaliana]
Length = 226
Score = 235 bits (599), Expect = 9e-060
Identities = 131/177 (74%), Positives = 143/177 (80%), Gaps = 12/177 (6%)
Frame = +3
Query: 285 EAQVVETQTEAKKKPAERKKSTSDEPKAKRVRKAKDENKKKSSSSSSNKPKRPLTAFFIF 464
EAQVVETQ EAKKKPAE+KK+TSD PK KR++K DE K SSS+SNKPKRPLTAFFIF
Sbjct: 54 EAQVVETQAEAKKKPAEKKKTTSDGPKPKRLKKTNDE---KKSSSTSNKPKRPLTAFFIF 110
Query: 465 MSDFRKTFKEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSLESSNDA 644
MSDFRKTFK E+ + KD AK GGEKWKSL EEEKKVYLDKAAELK EYNKSLE SNDA
Sbjct: 111 MSDFRKTFKSEHNGSLAKDAAKIGGEKWKSLTEEEKKVYLDKAAELKAEYNKSLE-SNDA 169
Query: 645 DEEEVDEEKEATDVDDADEKK--QTDEAEENEGEN-----KEAEGK-EEEDEILDDY 791
DEEE DEEK++ DVDDA+EK+ DE EE E EN KEAEGK EEE+EILDDY
Sbjct: 170 DEEEEDEEKQSDDVDDAEEKQVDDDDEVEEKEVENTDDDKKEAEGKEEEEEEILDDY 226
>gi|224097317|ref|XP_002310906.1| high mobility group family [Populus
trichocarpa]
Length = 201
Score = 215 bits (545), Expect = 2e-053
Identities = 115/205 (56%), Positives = 146/205 (71%), Gaps = 12/205 (5%)
Frame = +3
Query: 99 RKRVDVETKPETTANNNNNINTLLRAKDGSAFVRCEGCNKNVAVALISMHNCSLDAKIRV 278
RKRV+ E+ + + N +L+RAKDGSAF +CE C K+V VALIS H+CSLDAKI++
Sbjct: 3 RKRVEAESTDGSV--DANTTTSLVRAKDGSAFTKCEECKKDVPVALISFHSCSLDAKIKM 60
Query: 279 NLEAQVVETQTEAKKKPAERKKSTSDEPKAKRVRKAKDENKKKSSSSSSNKPKRPLTAFF 458
NLEAQVVE TEAK+KPAERKK +S EPK K+ KK+ N PKRP TAFF
Sbjct: 61 NLEAQVVEKPTEAKQKPAERKKGSSTEPKLKKA-------KKEKKGRDPNAPKRPPTAFF 113
Query: 459 IFMSDFRKTFKEENPDA-GVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSLESS 635
+FM DFRK +KE NPD+ VK VAK+GG +WKS+ +EEKK Y+DKAAELK E +K+LES
Sbjct: 114 LFMDDFRKEYKEANPDSKDVKKVAKEGGVRWKSMTDEEKKQYVDKAAELKAENDKALESD 173
Query: 636 N--DADEEEVDEEKEATDVDDADEK 704
N + D+E V EKE D++ D++
Sbjct: 174 NAENEDDEGVSSEKEVADLELRDKE 198
>gi|225463777|ref|XP_002267697.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 239
Score = 206 bits (523), Expect = 6e-051
Identities = 114/205 (55%), Positives = 141/205 (68%), Gaps = 27/205 (13%)
Frame = +3
Query: 78 KSTAPKARKRVDVETKPETTANNNNNINTLLRAKDGSAFVRCEGCNKNVAVALISMHNCS 257
K PK RKRV+ ET ++L RA+DGSAF+RCE C K+V V LI MH+CS
Sbjct: 49 KMAGPKQRKRVEAET------------SSLKRARDGSAFIRCEECKKDVPVVLIDMHSCS 96
Query: 258 LDAKIRVNLEAQVVETQTEAKKKPAERKKSTSDEPKAK---RVRKAKDENKKKSSSSSSN 428
L+AKI++NLEAQVVE T+ KKKPAE+K +T+ EPK K R+RK KD N
Sbjct: 97 LEAKIKLNLEAQVVEKVTDVKKKPAEKKNATTTEPKPKKSRRLRKVKD----------PN 146
Query: 429 KPKRPLTAFFIFMSDFRKTFKEENPDA-GVKDVAKQGGEKWKSLDEEEKKVYLDKAAELK 605
PKRP TAFF+FM DFRK +KE NPD+ V VAK+GGEKWKS+ +EEKK Y+DKAAELK
Sbjct: 147 MPKRPPTAFFLFMDDFRKEYKESNPDSKNVSVVAKEGGEKWKSMTDEEKKPYVDKAAELK 206
Query: 606 VEYNKSLESSN-DADEEEVDEEKEA 677
EY+K++E+ N + EEE KEA
Sbjct: 207 AEYDKAMETYNAENGEEEGGSGKEA 231
>gi|255544145|ref|XP_002513135.1| DNA-binding protein MNB1B, putative [Ricinus
communis]
Length = 196
Score = 205 bits (519), Expect = 2e-050
Identities = 103/183 (56%), Positives = 137/183 (74%), Gaps = 11/183 (6%)
Frame = +3
Query: 159 NTLLRAKDGSAFVRCEGCNKNVAVALISMHNCSLDAKIRVNLEAQVVETQTEAKKKPAER 338
N+++R KDGSAF RC+ C K+V VALISMH+CSL+A+I++NLEAQ+VE E KKPAER
Sbjct: 16 NSMVRGKDGSAFARCDECKKDVPVALISMHSCSLEARIKMNLEAQIVEKPAETTKKPAER 75
Query: 339 KKSTSDEPKAKRVRKAKDENKKKSSSSSSNKPKRPLTAFFIFMSDFRKTFKEENPDA-GV 515
KK TS EPKAK+ +K K N + NKPKRP TAFFIF+ +FRKTFKE NPD+ V
Sbjct: 76 KKPTSTEPKAKKAKKDKKPN-------NPNKPKRPPTAFFIFLDEFRKTFKEANPDSKDV 128
Query: 516 KDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSLESSNDADEEEVDEEKEATDVDDA 695
K VAK+ GEKWK++ +EEKK Y DKA ELK EY+K+L N+A+ + +++ ++ DDA
Sbjct: 129 KRVAKEAGEKWKAMTDEEKKPYADKATELKAEYDKALGEVNNAENK---DDEGGSEKDDA 185
Query: 696 DEK 704
+++
Sbjct: 186 EQE 188
>gi|147815109|emb|CAN61363.1| hypothetical protein VITISV_034306 [Vitis
vinifera]
Length = 190
Score = 197 bits (500), Expect = 3e-048
Identities = 105/178 (58%), Positives = 131/178 (73%), Gaps = 15/178 (8%)
Frame = +3
Query: 159 NTLLRAKDGSAFVRCEGCNKNVAVALISMHNCSLDAKIRVNLEAQVVETQTEAKKKPAER 338
++L RA+DGSAF+RCE C K+V V LI MH+CSL+AKI++NLEAQVVE T+ KKKPAE+
Sbjct: 15 SSLKRARDGSAFIRCEECKKDVPVVLIDMHSCSLEAKIKLNLEAQVVEKVTDVKKKPAEK 74
Query: 339 KKSTSDEPKAK---RVRKAKDENKKKSSSSSSNKPKRPLTAFFIFMSDFRKTFKEENPDA 509
K +T+ EPK K R+RK KD N PKRP TAFF+FM DFRK +KE NPD+
Sbjct: 75 KNATTTEPKPKKSRRLRKVKD----------PNMPKRPPTAFFLFMDDFRKEYKESNPDS 124
Query: 510 -GVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSLESSN-DADEEEVDEEKEA 677
V VAK+GGEKWKS+ +EEKK Y+DKAAELK EY+K++E+ N + EEE KEA
Sbjct: 125 KNVSVVAKEGGEKWKSMTDEEKKPYVDKAAELKAEYDKAMETYNAENGEEEGGSGKEA 182
>gi|255628875|gb|ACU14782.1| unknown [Glycine max]
Length = 209
Score = 191 bits (485), Expect = 1e-046
Identities = 103/207 (49%), Positives = 139/207 (67%), Gaps = 10/207 (4%)
Frame = +3
Query: 117 ETKPETTANNNNNINTLLRAKDGSAFVRCEGCNKNVAVALISMHNCSLDAKIRVNLEAQV 296
+++ A ++ + L+RAKDGSAF RC+ C KNV VALI MH+CSL+AKI++NL+AQV
Sbjct: 5 QSRKRVDAVDSRAASVLVRAKDGSAFARCDDCKKNVPVALIDMHSCSLEAKIKMNLDAQV 64
Query: 297 VETQTEAKKKPAERKKSTSDEPKAKRVRKAKDENKKKSSSSSSNKPKRPLTAFFIFMSDF 476
VE EAKK ERKK S EP AK+ + K + K N PKRP TAFF+F+ DF
Sbjct: 65 VEQAAEAKK--PERKKPKSKEPMAKKAKVGKGKKVK-----DPNMPKRPPTAFFVFLDDF 117
Query: 477 RKTFKEENPDA-GVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSLES--SNDAD 647
RK+FKE NPD+ VK V K+ GEKW+S+ +EEKK YLDK AELK EY K++ES + +
Sbjct: 118 RKSFKEANPDSKDVKRVGKEAGEKWRSMTDEEKKPYLDKVAELKEEYEKAMESYEAGQDE 177
Query: 648 EEEVDEEKEATDVDDADEKKQTDEAEE 728
E++ +KE +D + A ++ + EE
Sbjct: 178 EDQTVSDKETSDKEAAAKEVAIEVEEE 204
>gi|334187856|ref|NP_001190371.1| high-mobility group B6 protein [Arabidopsis
thaliana]
Length = 157
Score = 126 bits (314), Expect = 1e-026
Identities = 68/103 (66%), Positives = 76/103 (73%), Gaps = 7/103 (6%)
Frame = +3
Query: 81 STAPKARKRVDVETKPETTANNNNNINTLLRAKDGSAFVRCEGCNKNVAVALISMHNCSL 260
S APK RKRV+ ET ++N TL RAKDGSAF CEGCNK+VAVALISMHNCSL
Sbjct: 8 SNAPKQRKRVEAET-------SSNTSTTLRRAKDGSAFALCEGCNKSVAVALISMHNCSL 60
Query: 261 DAKIRVNLEAQVVETQTEAKKKPAERKKSTSDEPKAKRVRKAK 389
DAKIRVNLEAQVVETQ EAKKKPAE+K S+ +R+ K
Sbjct: 61 DAKIRVNLEAQVVETQAEAKKKPAEKKMRRSNLMMLMMLRRNK 103
>gi|126327421|ref|XP_001367294.1| PREDICTED: high mobility group protein B1-like
isoform 2 [Monodelphis domestica]
Length = 216
Score = 96 bits (237), Expect = 8e-018
Identities = 59/179 (32%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Frame = +3
Query: 252 CSLDAKIRVNLEAQVVETQTEAKKKPAERKKSTSDEPKAKRVRKAKDENKKKSSSSSSNK 431
CS K E E +A K ER+ T PK + +K KD N
Sbjct: 45 CSERWKTMSAKEKGKFEDMAKADKVRYEREMKTYIPPKGETKKKFKD----------PNA 94
Query: 432 PKRPLTAFFIFMSDFRKTFKEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVE 611
PKRP +AFF+F S++R K E+P + DVAK+ GE W + ++K+ Y KAA+LK +
Sbjct: 95 PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEK 154
Query: 612 YNKSLESSNDADEEEVDEEKEATDVDDADEKKQTDEAEENEGENKEAEGKEEEDEILDD 788
Y K + + + +V ++ + + +KK+ +E EE+E + + E EEE+E DD
Sbjct: 155 YEKDIAAYRAKGKPDVGKKGGVVKAEKSKKKKEEEEDEEDEEDEDDDEEDEEEEEEDDD 213
>gi|8393536|ref|NP_058883.1| high mobility group protein B2 [Rattus norvegicus]
Length = 210
Score = 91 bits (224), Expect = 3e-016
Identities = 52/156 (33%), Positives = 78/156 (50%), Gaps = 2/156 (1%)
Frame = +3
Query: 315 AKKKPAERKKSTSDEPKAKRVRK--AKDENKKKSSSSSSNKPKRPLTAFFIFMSDFRKTF 488
AK+K + SD+ + R K + KK N PKRP +AFF+F S+ R
Sbjct: 54 AKEKSKFEDLAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKI 113
Query: 489 KEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSLESSNDADEEEVDEE 668
K E+P + D AK+ GE W ++K+ Y KAA+LK +Y K + + + EV ++
Sbjct: 114 KSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEVGKK 173
Query: 669 KEATDVDDADEKKQTDEAEENEGENKEAEGKEEEDE 776
+ + DE EE E E+ E E +E+EDE
Sbjct: 174 GPGRPTGSKKKNEPEDEEEEEEEEDDEDEEEEDEDE 209
>gi|600761|gb|AAA57042.1| high mobility group 1 protein [Mus musculus]
Length = 215
Score = 91 bits (224), Expect = 3e-016
Identities = 53/162 (32%), Positives = 88/162 (54%), Gaps = 6/162 (3%)
Frame = +3
Query: 315 AKKKPAERKKSTSDEPKAKRVRKA----KDENKKKSSSSSSNKPKRPLTAFFIFMSDFRK 482
AK+K + +D+ + +R K K E KKK N PKRP +AFF+F S++R
Sbjct: 54 AKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK--FKDPNAPKRPPSAFFLFCSEYRP 111
Query: 483 TFKEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSLESSNDADEEEVD 662
K E+P + DVAK+ GE W + ++K+ Y KAA+LK +Y K + + + +
Sbjct: 112 KIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Query: 663 EEKEATDVDDADEKKQTDEAEENEGENKEAEGKEEEDEILDD 788
++ V +K++ D+ E+ E E +E E ++E++E DD
Sbjct: 172 KKGVVKAVKSKKKKEEEDDEEDEEDEEEEEEEEDEDEEEDDD 213
>gi|334323271|ref|XP_003340370.1| PREDICTED: high mobility group protein B1-like
[Monodelphis domestica]
Length = 216
Score = 91 bits (224), Expect = 3e-016
Identities = 55/162 (33%), Positives = 88/162 (54%), Gaps = 6/162 (3%)
Frame = +3
Query: 315 AKKKPAERKKSTSDEPKAKRVRKA----KDENKKKSSSSSSNKPKRPLTAFFIFMSDFRK 482
AK+K + + +D+ +R K K E KKK N PKRP +AFF+F S++R
Sbjct: 54 AKEKGKFQDMAKADKVHYEREMKTYIPPKGETKKK--FKDPNAPKRPPSAFFLFCSEYRP 111
Query: 483 TFKEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSLESSNDADEEEVD 662
K E+P + DVAK+ GE W + ++K+ Y KAA LK +Y K + + + +V
Sbjct: 112 KIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAILKEKYEKDIAAYRTKGKPDVG 171
Query: 663 EEKEATDVDDADEKKQTDEAEENEGENKEAEGKEEEDEILDD 788
++ + + +KK+ +E EE+E + + E EEE+E DD
Sbjct: 172 KKGGIVKAEKSKKKKEEEEDEEDEEDEDDDEEDEEEEEEDDD 213
>gi|149060359|gb|EDM11073.1| rCG63620 [Rattus norvegicus]
Length = 198
Score = 91 bits (224), Expect = 3e-016
Identities = 52/156 (33%), Positives = 78/156 (50%), Gaps = 2/156 (1%)
Frame = +3
Query: 315 AKKKPAERKKSTSDEPKAKRVRK--AKDENKKKSSSSSSNKPKRPLTAFFIFMSDFRKTF 488
AK+K + SD+ + R K + KK N PKRP +AFF+F S+ R
Sbjct: 42 AKEKSKFEDLAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKI 101
Query: 489 KEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSLESSNDADEEEVDEE 668
K E+P + D AK+ GE W ++K+ Y KAA+LK +Y K + + + EV ++
Sbjct: 102 KSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEVGKK 161
Query: 669 KEATDVDDADEKKQTDEAEENEGENKEAEGKEEEDE 776
+ + DE EE E E+ E E +E+EDE
Sbjct: 162 GPGRPTGSKKKNEPEDEEEEEEEEDDEDEEEEDEDE 197
>gi|291415754|ref|XP_002724114.1| PREDICTED: high-mobility group box 2-like
[Oryctolagus cuniculus]
Length = 234
Score = 91 bits (224), Expect = 3e-016
Identities = 55/156 (35%), Positives = 77/156 (49%), Gaps = 4/156 (2%)
Frame = +3
Query: 315 AKKKPAERKKSTSDEPKAKRVRK--AKDENKKKSSSSSSNKPKRPLTAFFIFMSDFRKTF 488
AK+K + SD+ + R K + KK N PKRP +AFF+F S+ R
Sbjct: 78 AKEKSKFENMAKSDKARYDREMKNYVPPKGAKKGKKKDPNAPKRPPSAFFLFCSEHRPEI 137
Query: 489 KEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSLESSNDADEEEVDEE 668
K E+P + D AK+ GE W ++K+ Y KAA+LK +Y K + + D + E
Sbjct: 138 KSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYCDKGKSEAG-- 195
Query: 669 KEATDVDDADEKKQTDEAEENEGENKEAEGKEEEDE 776
K+ +KK E EE E E +E E EEEDE
Sbjct: 196 KKGPGRPTGSKKKNEPEDEEEEEEEEEDEDDEEEDE 231
>gi|194208319|ref|XP_001498869.2| PREDICTED: high mobility group protein B2-like
[Equus caballus]
Length = 210
Score = 91 bits (223), Expect = 4e-016
Identities = 52/156 (33%), Positives = 76/156 (48%), Gaps = 2/156 (1%)
Frame = +3
Query: 315 AKKKPAERKKSTSDEPKAKRVRK--AKDENKKKSSSSSSNKPKRPLTAFFIFMSDFRKTF 488
AK+K + SD+ + R K + KK N PKRP +AFF+F S+ R
Sbjct: 54 AKEKSKFEDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKI 113
Query: 489 KEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSLESSNDADEEEVDEE 668
K E+P + D AK+ GE W ++K+ Y KAA+LK +Y K + + + E ++
Sbjct: 114 KSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKK 173
Query: 669 KEATDVDDADEKKQTDEAEENEGENKEAEGKEEEDE 776
+ + DE EE E E E E +EEEDE
Sbjct: 174 GPGRPTGSKKKNEPEDEEEEEEEEEDEDEEEEEEDE 209
>gi|241122588|ref|XP_002403591.1| DNA-binding protein, putative [Ixodes
scapularis]
Length = 207
Score = 90 bits (222), Expect = 5e-016
Identities = 51/160 (31%), Positives = 88/160 (55%), Gaps = 10/160 (6%)
Frame = +3
Query: 300 ETQTEAKKK----PAERKKSTSDEPKAKRVRKAKDENKKKSSSSSSNKPKRPLTAFFIFM 467
+T +E +KK A++ K D A +++KK+ + N PKRPL+AFF F
Sbjct: 48 KTMSEGEKKRFHQMADKDKKRFDSEMADYKPPKGEKSKKRKRTKDPNAPKRPLSAFFWFC 107
Query: 468 SDFRKTFKEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSLESSND-- 641
+D R ++E+PDA V +VAK+ G +W + ++ K Y AA+ K Y K L++ +
Sbjct: 108 NDERPNVRQESPDASVGEVAKELGRRWNDVGDDTKSKYEGLAAKDKARYEKELKAYKNKK 167
Query: 642 ----ADEEEVDEEKEATDVDDADEKKQTDEAEENEGENKE 749
+ +E ++K+ + DD D +++ +EAEE + E+ E
Sbjct: 168 TKGASPPKEKGKKKDEDEDDDDDAEEEEEEAEEEDDEDDE 207
>gi|73993609|ref|XP_543194.2| PREDICTED: similar to high-mobility group box 2
isoform 1 [Canis familiaris]
Length = 210
Score = 89 bits (220), Expect = 8e-016
Identities = 51/156 (32%), Positives = 76/156 (48%), Gaps = 2/156 (1%)
Frame = +3
Query: 315 AKKKPAERKKSTSDEPKAKRVRK--AKDENKKKSSSSSSNKPKRPLTAFFIFMSDFRKTF 488
AK+K + SD+ + R K + KK N PKRP +AFF+F S+ R
Sbjct: 54 AKEKSKFEDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKI 113
Query: 489 KEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSLESSNDADEEEVDEE 668
K E+P + D AK+ GE W ++K+ Y KAA+LK +Y K + + + E ++
Sbjct: 114 KSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKK 173
Query: 669 KEATDVDDADEKKQTDEAEENEGENKEAEGKEEEDE 776
+ + DE EE E E E + +EEEDE
Sbjct: 174 GPGRPTGSKKKNEPEDEEEEEEEEEDEDDEEEEEDE 209
>gi|297674678|ref|XP_002815340.1| PREDICTED: high mobility group protein B2-like
isoform 1 [Pongo abelii]
Length = 210
Score = 89 bits (220), Expect = 8e-016
Identities = 54/156 (34%), Positives = 77/156 (49%), Gaps = 4/156 (2%)
Frame = +3
Query: 315 AKKKPAERKKSTSDEPKAKRVRK--AKDENKKKSSSSSSNKPKRPLTAFFIFMSDFRKTF 488
AK+K + SD+ + R K + KK N PKRP +AFF+F S+ R
Sbjct: 54 AKEKSKFEDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKI 113
Query: 489 KEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSLESSNDADEEEVDEE 668
K E+P + D AK+ GE W ++K+ Y KAA+LK +Y K + + + E
Sbjct: 114 KSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAG-- 171
Query: 669 KEATDVDDADEKKQTDEAEENEGENKEAEGKEEEDE 776
K+ +KK E EE E E +E E +EEEDE
Sbjct: 172 KKGPGRPTGSKKKNEPEDEEEEEEEEEDEDEEEEDE 207
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,858,667,303,965
Number of Sequences: 15229318
Number of Extensions: 2858667303965
Number of Successful Extensions: 679566730
Number of sequences better than 0.0: 0
|
