BLASTX 7.6.2
Query= UN24017 /QuerySize=1031
(1030 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|B0CM99|HMGB1_CALJA High mobility group protein B1 OS=Callithr... 94 1e-018
sp|B1MTB0|HMGB1_CALMO High mobility group protein B1 OS=Calliceb... 94 1e-018
sp|Q6YKA4|HMGB1_CANFA High mobility group protein B1 OS=Canis fa... 94 1e-018
sp|Q08IE6|HMGB1_HORSE High mobility group protein B1 OS=Equus ca... 94 1e-018
sp|P09429|HMGB1_HUMAN High mobility group protein B1 OS=Homo sap... 94 1e-018
sp|Q4R844|HMGB1_MACFA High mobility group protein B1 OS=Macaca f... 94 1e-018
sp|P10103|HMGB1_BOVIN High mobility group protein B1 OS=Bos taur... 92 4e-018
sp|P07156|HMGB1_CRIGR High mobility group protein B1 (Fragment) ... 92 4e-018
sp|P52925|HMGB2_RAT High mobility group protein B2 OS=Rattus nor... 91 1e-017
sp|P17741|HMGB2_PIG High mobility group protein B2 OS=Sus scrofa... 89 6e-017
sp|P40618|HMGB3_CHICK High mobility group protein B3 OS=Gallus g... 88 8e-017
sp|O15347|HMGB3_HUMAN High mobility group protein B3 OS=Homo sap... 88 8e-017
sp|P30681|HMGB2_MOUSE High mobility group protein B2 OS=Mus musc... 88 1e-016
sp|Q32L31|HMGB3_BOVIN High mobility group protein B3 OS=Bos taur... 88 1e-016
sp|P40673|HMGB2_BOVIN High mobility group protein B2 OS=Bos taur... 87 2e-016
sp|P26583|HMGB2_HUMAN High mobility group protein B2 OS=Homo sap... 87 2e-016
sp|P36194|HMGB1_CHICK High mobility group protein B1 OS=Gallus g... 87 2e-016
sp|O54879|HMGB3_MOUSE High mobility group protein B3 OS=Mus musc... 87 2e-016
sp|P07746|HMGT_ONCMY High mobility group-T protein OS=Oncorhynch... 84 1e-015
sp|Q05344|SSRP1_DROME FACT complex subunit Ssrp1 OS=Drosophila m... 83 2e-015
>sp|B0CM99|HMGB1_CALJA High mobility group protein B1 OS=Callithrix jacchus
GN=HMGB1 PE=3 SV=1
Length = 215
Score = 94 bits (232), Expect = 1e-018
Identities = 56/162 (34%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Frame = +3
Query: 315 AKKKPAERKKSTSDEPKAKRVRKA----KDENKKKSSSSSSNKPKRPLTAFFIFMSDFRK 482
AK+K + +D+ + +R K K E KKK N PKRP +AFF+F S++R
Sbjct: 54 AKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK--FKDPNAPKRPPSAFFLFCSEYRP 111
Query: 483 TFKEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSLESSNDADEEEVD 662
K E+P + DVAK+ GE W + ++K+ Y KAA+LK +Y K + + + +
Sbjct: 112 KIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDA- 170
Query: 663 EEKEATDVDDADEKKQTDEAEENEGENKEAEGKEEEDEILDD 788
+K + + +KK+ +E EE+E + +E E +E+EDE DD
Sbjct: 171 AKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 212
>sp|B1MTB0|HMGB1_CALMO High mobility group protein B1 OS=Callicebus moloch
GN=HMGB1 PE=3 SV=1
Length = 215
Score = 94 bits (232), Expect = 1e-018
Identities = 56/162 (34%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Frame = +3
Query: 315 AKKKPAERKKSTSDEPKAKRVRKA----KDENKKKSSSSSSNKPKRPLTAFFIFMSDFRK 482
AK+K + +D+ + +R K K E KKK N PKRP +AFF+F S++R
Sbjct: 54 AKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK--FKDPNAPKRPPSAFFLFCSEYRP 111
Query: 483 TFKEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSLESSNDADEEEVD 662
K E+P + DVAK+ GE W + ++K+ Y KAA+LK +Y K + + + +
Sbjct: 112 KIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDA- 170
Query: 663 EEKEATDVDDADEKKQTDEAEENEGENKEAEGKEEEDEILDD 788
+K + + +KK+ +E EE+E + +E E +E+EDE DD
Sbjct: 171 AKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 212
>sp|Q6YKA4|HMGB1_CANFA High mobility group protein B1 OS=Canis familiaris
GN=HMGB1 PE=2 SV=3
Length = 215
Score = 94 bits (232), Expect = 1e-018
Identities = 56/162 (34%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Frame = +3
Query: 315 AKKKPAERKKSTSDEPKAKRVRKA----KDENKKKSSSSSSNKPKRPLTAFFIFMSDFRK 482
AK+K + +D+ + +R K K E KKK N PKRP +AFF+F S++R
Sbjct: 54 AKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK--FKDPNAPKRPPSAFFLFCSEYRP 111
Query: 483 TFKEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSLESSNDADEEEVD 662
K E+P + DVAK+ GE W + ++K+ Y KAA+LK +Y K + + + +
Sbjct: 112 KIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDA- 170
Query: 663 EEKEATDVDDADEKKQTDEAEENEGENKEAEGKEEEDEILDD 788
+K + + +KK+ +E EE+E + +E E +E+EDE DD
Sbjct: 171 AKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 212
>sp|Q08IE6|HMGB1_HORSE High mobility group protein B1 OS=Equus caballus GN=HMGB1
PE=2 SV=3
Length = 215
Score = 94 bits (232), Expect = 1e-018
Identities = 56/162 (34%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Frame = +3
Query: 315 AKKKPAERKKSTSDEPKAKRVRKA----KDENKKKSSSSSSNKPKRPLTAFFIFMSDFRK 482
AK+K + +D+ + +R K K E KKK N PKRP +AFF+F S++R
Sbjct: 54 AKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK--FKDPNAPKRPPSAFFLFCSEYRP 111
Query: 483 TFKEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSLESSNDADEEEVD 662
K E+P + DVAK+ GE W + ++K+ Y KAA+LK +Y K + + + +
Sbjct: 112 KIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDA- 170
Query: 663 EEKEATDVDDADEKKQTDEAEENEGENKEAEGKEEEDEILDD 788
+K + + +KK+ +E EE+E + +E E +E+EDE DD
Sbjct: 171 AKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 212
>sp|P09429|HMGB1_HUMAN High mobility group protein B1 OS=Homo sapiens GN=HMGB1
PE=1 SV=3
Length = 215
Score = 94 bits (232), Expect = 1e-018
Identities = 56/162 (34%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Frame = +3
Query: 315 AKKKPAERKKSTSDEPKAKRVRKA----KDENKKKSSSSSSNKPKRPLTAFFIFMSDFRK 482
AK+K + +D+ + +R K K E KKK N PKRP +AFF+F S++R
Sbjct: 54 AKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK--FKDPNAPKRPPSAFFLFCSEYRP 111
Query: 483 TFKEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSLESSNDADEEEVD 662
K E+P + DVAK+ GE W + ++K+ Y KAA+LK +Y K + + + +
Sbjct: 112 KIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDA- 170
Query: 663 EEKEATDVDDADEKKQTDEAEENEGENKEAEGKEEEDEILDD 788
+K + + +KK+ +E EE+E + +E E +E+EDE DD
Sbjct: 171 AKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 212
>sp|Q4R844|HMGB1_MACFA High mobility group protein B1 OS=Macaca fascicularis
GN=HMGB1 PE=2 SV=3
Length = 215
Score = 94 bits (232), Expect = 1e-018
Identities = 56/162 (34%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Frame = +3
Query: 315 AKKKPAERKKSTSDEPKAKRVRKA----KDENKKKSSSSSSNKPKRPLTAFFIFMSDFRK 482
AK+K + +D+ + +R K K E KKK N PKRP +AFF+F S++R
Sbjct: 54 AKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK--FKDPNAPKRPPSAFFLFCSEYRP 111
Query: 483 TFKEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSLESSNDADEEEVD 662
K E+P + DVAK+ GE W + ++K+ Y KAA+LK +Y K + + + +
Sbjct: 112 KIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDA- 170
Query: 663 EEKEATDVDDADEKKQTDEAEENEGENKEAEGKEEEDEILDD 788
+K + + +KK+ +E EE+E + +E E +E+EDE DD
Sbjct: 171 AKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 212
>sp|P10103|HMGB1_BOVIN High mobility group protein B1 OS=Bos taurus GN=HMGB1
PE=1 SV=3
Length = 215
Score = 92 bits (228), Expect = 4e-018
Identities = 55/162 (33%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Frame = +3
Query: 315 AKKKPAERKKSTSDEPKAKRVRKA----KDENKKKSSSSSSNKPKRPLTAFFIFMSDFRK 482
AK+K + +D+ + +R K K E KKK N PKRP +AFF+F S++R
Sbjct: 54 AKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK--FKDPNAPKRPPSAFFLFCSEYRP 111
Query: 483 TFKEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSLESSNDADEEEVD 662
K E+P + DVAK+ GE W + ++K+ Y KAA+LK +Y K + + + +
Sbjct: 112 KIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDA- 170
Query: 663 EEKEATDVDDADEKKQTDEAEENEGENKEAEGKEEEDEILDD 788
+K + + +KK+ +E EE+E + +E E +E+E+E DD
Sbjct: 171 AKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEEEEEDD 212
>sp|P07156|HMGB1_CRIGR High mobility group protein B1 (Fragment) OS=Cricetulus
griseus GN=HMGB1 PE=1 SV=1
Length = 180
Score = 92 bits (228), Expect = 4e-018
Identities = 55/162 (33%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Frame = +3
Query: 315 AKKKPAERKKSTSDEPKAKRVRKA----KDENKKKSSSSSSNKPKRPLTAFFIFMSDFRK 482
AK+K + +D+ + +R K K E KKK N PKRP +AFF+F S++R
Sbjct: 19 AKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK--FKDPNAPKRPPSAFFLFCSEYRP 76
Query: 483 TFKEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSLESSNDADEEEVD 662
K E+P + DVAK+ GE W + ++K+ Y KAA+LK +Y K + + + +
Sbjct: 77 KIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDA- 135
Query: 663 EEKEATDVDDADEKKQTDEAEENEGENKEAEGKEEEDEILDD 788
+K + + +KK+ ++ EE+E + +E E +E+EDE DD
Sbjct: 136 AKKGVVKAEKSKKKKEEEDDEEDEEDEEEEEEEEDEDEEEDD 177
>sp|P52925|HMGB2_RAT High mobility group protein B2 OS=Rattus norvegicus
GN=Hmgb2 PE=2 SV=2
Length = 210
Score = 91 bits (224), Expect = 1e-017
Identities = 52/156 (33%), Positives = 78/156 (50%), Gaps = 2/156 (1%)
Frame = +3
Query: 315 AKKKPAERKKSTSDEPKAKRVRK--AKDENKKKSSSSSSNKPKRPLTAFFIFMSDFRKTF 488
AK+K + SD+ + R K + KK N PKRP +AFF+F S+ R
Sbjct: 54 AKEKSKFEDLAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKI 113
Query: 489 KEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSLESSNDADEEEVDEE 668
K E+P + D AK+ GE W ++K+ Y KAA+LK +Y K + + + EV ++
Sbjct: 114 KSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEVGKK 173
Query: 669 KEATDVDDADEKKQTDEAEENEGENKEAEGKEEEDE 776
+ + DE EE E E+ E E +E+EDE
Sbjct: 174 GPGRPTGSKKKNEPEDEEEEEEEEDDEDEEEEDEDE 209
>sp|P17741|HMGB2_PIG High mobility group protein B2 OS=Sus scrofa GN=HMGB2 PE=1
SV=2
Length = 210
Score = 89 bits (218), Expect = 6e-017
Identities = 54/156 (34%), Positives = 77/156 (49%), Gaps = 4/156 (2%)
Frame = +3
Query: 315 AKKKPAERKKSTSDEPKAKRVRK--AKDENKKKSSSSSSNKPKRPLTAFFIFMSDFRKTF 488
AK+K + SD+ + R K + KK N PKRP +AFF+F S+ R
Sbjct: 54 AKEKSKFEDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKI 113
Query: 489 KEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSLESSNDADEEEVDEE 668
K E+P + D AK+ GE W ++K+ Y KAA+LK +Y K + + + E
Sbjct: 114 KSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKGEAG-- 171
Query: 669 KEATDVDDADEKKQTDEAEENEGENKEAEGKEEEDE 776
K+ +KK E EE E E +E E +EEEDE
Sbjct: 172 KKGPGRPTGSKKKNEPEDEEEEEEEEEDEDEEEEDE 207
>sp|P40618|HMGB3_CHICK High mobility group protein B3 OS=Gallus gallus GN=HMGB3
PE=2 SV=2
Length = 202
Score = 88 bits (217), Expect = 8e-017
Identities = 58/157 (36%), Positives = 87/157 (55%), Gaps = 10/157 (6%)
Frame = +3
Query: 309 TEAKKKPAERKKSTSDE-PKAKRV---RKAKDENKKKSSSSSS--NKPKRPLTAFFIFMS 470
+E K + ++K+ DE KA +V R+ KD K N PKRP +AFF+F S
Sbjct: 46 SERWKTMSSKEKAKFDEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSAFFLFCS 105
Query: 471 DFRKTFKEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSL---ESSND 641
+FR K NP + DVAK+ GE W +L + EK+ Y +KAA+LK +Y K + +S
Sbjct: 106 EFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAKLKEKYEKDVADYKSKGK 165
Query: 642 ADEEEVDEEKEA-TDVDDADEKKQTDEAEENEGENKE 749
D + K A V++ DE+++ DE EE+E ++ E
Sbjct: 166 FDGAKGAATKAARKKVEEEDEEEEEDEEEEDEDDDDE 202
>sp|O15347|HMGB3_HUMAN High mobility group protein B3 OS=Homo sapiens GN=HMGB3
PE=1 SV=4
Length = 200
Score = 88 bits (217), Expect = 8e-017
Identities = 55/155 (35%), Positives = 85/155 (54%), Gaps = 9/155 (5%)
Frame = +3
Query: 309 TEAKKKPAERKKSTSDE-PKAKRV---RKAKDENKKKSSSSSS--NKPKRPLTAFFIFMS 470
+E K + ++KS DE KA +V R+ KD K N PKRP + FF+F S
Sbjct: 46 SERWKTMSGKEKSKFDEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCS 105
Query: 471 DFRKTFKEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSL---ESSND 641
+FR K NP + DVAK+ GE W +L++ EK+ Y+ KAA+LK +Y K + +S
Sbjct: 106 EFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGK 165
Query: 642 ADEEEVDEEKEATDVDDADEKKQTDEAEENEGENK 746
D + + V++ DE+++ +E EE E E++
Sbjct: 166 FDGAKGPAKVARKKVEEEDEEEEEEEEEEEEEEDE 200
>sp|P30681|HMGB2_MOUSE High mobility group protein B2 OS=Mus musculus GN=Hmgb2
PE=1 SV=3
Length = 210
Score = 88 bits (216), Expect = 1e-016
Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 2/156 (1%)
Frame = +3
Query: 315 AKKKPAERKKSTSDEPKAKRVRK--AKDENKKKSSSSSSNKPKRPLTAFFIFMSDFRKTF 488
AK+K + SD+ + R K + KK N PKRP +AFF+F S+ R
Sbjct: 54 AKEKSKFEDLAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSENRPKI 113
Query: 489 KEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSLESSNDADEEEVDEE 668
K E+P + D AK+ GE W ++K+ Y KAA+LK +Y K + + + E ++
Sbjct: 114 KIEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKK 173
Query: 669 KEATDVDDADEKKQTDEAEENEGENKEAEGKEEEDE 776
+ + DE EE E E +E + +EEEDE
Sbjct: 174 GPGRPTGSKKKNEPEDEEEEEEEEEEEDDEEEEEDE 209
>sp|Q32L31|HMGB3_BOVIN High mobility group protein B3 OS=Bos taurus GN=HMGB3
PE=2 SV=2
Length = 200
Score = 88 bits (216), Expect = 1e-016
Identities = 58/157 (36%), Positives = 85/157 (54%), Gaps = 10/157 (6%)
Frame = +3
Query: 309 TEAKKKPAERKKSTSDE-PKAKRV---RKAKDENKKKSSSSSS--NKPKRPLTAFFIFMS 470
+E K + ++KS DE KA +V R+ KD K N PKRP + FF+F S
Sbjct: 46 SERWKTMSGKEKSKFDEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCS 105
Query: 471 DFRKTFKEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSLESSNDADE 650
+FR K NP + DVAK+ GE W +L + EK+ Y++KAA+LK +Y K + ++ +
Sbjct: 106 EFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAKLKEKYEKDV--ADYKSK 163
Query: 651 EEVDEEKEATDV--DDADEKKQTDEAEENEGENKEAE 755
+ D K A V +E+ + DE EE E E +E E
Sbjct: 164 GKFDGAKGAAKVARKKVEEEDEEDEEEEEEEEEEEDE 200
>sp|P40673|HMGB2_BOVIN High mobility group protein B2 OS=Bos taurus GN=HMGB2
PE=1 SV=3
Length = 209
Score = 87 bits (214), Expect = 2e-016
Identities = 48/156 (30%), Positives = 78/156 (50%), Gaps = 2/156 (1%)
Frame = +3
Query: 315 AKKKPAERKKSTSDEPKAKRVRK--AKDENKKKSSSSSSNKPKRPLTAFFIFMSDFRKTF 488
AK+K + SD+ + R K + KK N PKRP +AFF+F S+ R
Sbjct: 54 AKEKSKFEDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKI 113
Query: 489 KEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSLESSNDADEEEVDEE 668
K E+P + D AK+ GE W ++K+ Y KAA+LK +Y K + + + E ++
Sbjct: 114 KSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKK 173
Query: 669 KEATDVDDADEKKQTDEAEENEGENKEAEGKEEEDE 776
+ + DE EE E E+++ E ++E++E
Sbjct: 174 GPGRPTGSKKKNEPEDEEEEEEEEDEDEEEEDEDEE 209
>sp|P26583|HMGB2_HUMAN High mobility group protein B2 OS=Homo sapiens GN=HMGB2
PE=1 SV=2
Length = 209
Score = 87 bits (214), Expect = 2e-016
Identities = 48/156 (30%), Positives = 78/156 (50%), Gaps = 2/156 (1%)
Frame = +3
Query: 315 AKKKPAERKKSTSDEPKAKRVRK--AKDENKKKSSSSSSNKPKRPLTAFFIFMSDFRKTF 488
AK+K + SD+ + R K + KK N PKRP +AFF+F S+ R
Sbjct: 54 AKEKSKFEDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKI 113
Query: 489 KEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSLESSNDADEEEVDEE 668
K E+P + D AK+ GE W ++K+ Y KAA+LK +Y K + + + E ++
Sbjct: 114 KSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKK 173
Query: 669 KEATDVDDADEKKQTDEAEENEGENKEAEGKEEEDE 776
+ + DE EE E E+++ E ++E++E
Sbjct: 174 GPGRPTGSKKKNEPEDEEEEEEEEDEDEEEEDEDEE 209
>sp|P36194|HMGB1_CHICK High mobility group protein B1 OS=Gallus gallus GN=HMGB1
PE=2 SV=2
Length = 201
Score = 87 bits (213), Expect = 2e-016
Identities = 57/157 (36%), Positives = 86/157 (54%), Gaps = 10/157 (6%)
Frame = +3
Query: 309 TEAKKKPAERKKSTSDE-PKAKRV---RKAKDENKKKSSSSSS--NKPKRPLTAFFIFMS 470
+E K + ++K+ DE KA +V R+ KD K N PKRP + FF+F S
Sbjct: 45 SERWKTMSSKEKAKFDEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCS 104
Query: 471 DFRKTFKEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSL---ESSND 641
+FR K NP + DVAK+ GE W +L + EK+ Y +KAA+LK +Y K + +S
Sbjct: 105 EFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAKLKEKYEKDVADYKSKGK 164
Query: 642 ADEEEVDEEKEA-TDVDDADEKKQTDEAEENEGENKE 749
D + K A V++ DE+++ DE EE+E ++ E
Sbjct: 165 FDGAKGAATKAARKKVEEEDEEEEEDEEEEDEDDDDE 201
>sp|O54879|HMGB3_MOUSE High mobility group protein B3 OS=Mus musculus GN=Hmgb3
PE=2 SV=3
Length = 200
Score = 87 bits (213), Expect = 2e-016
Identities = 54/155 (34%), Positives = 84/155 (54%), Gaps = 9/155 (5%)
Frame = +3
Query: 309 TEAKKKPAERKKSTSDE-PKAKRV---RKAKDENKKKSSSSSS--NKPKRPLTAFFIFMS 470
+E K + ++KS DE KA +V R+ KD K N PKRP + FF+F S
Sbjct: 46 SERWKTMSSKEKSKFDEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCS 105
Query: 471 DFRKTFKEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSL---ESSND 641
+FR K NP + DVAK+ GE W +L + EK+ Y+ KAA+LK +Y K + +S
Sbjct: 106 EFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYVTKAAKLKEKYEKDVADYKSKGK 165
Query: 642 ADEEEVDEEKEATDVDDADEKKQTDEAEENEGENK 746
D + + V++ +E+++ +E EE E E++
Sbjct: 166 FDGAKGPAKVARKKVEEEEEEEEEEEEEEEEEEDE 200
>sp|P07746|HMGT_ONCMY High mobility group-T protein OS=Oncorhynchus mykiss PE=2
SV=2
Length = 204
Score = 84 bits (207), Expect = 1e-015
Identities = 51/155 (32%), Positives = 77/155 (49%), Gaps = 11/155 (7%)
Frame = +3
Query: 318 KKKPAERKKSTSDEPKAKRVRKAKD-------ENKKKSSSSSSNKPKRPLTAFFIFMSDF 476
K A+ K D K +VR ++ + +KK N PKRP +AFFIF +DF
Sbjct: 49 KTMSAKEKGKFEDLAKLDKVRYEREMRSYIPPKGEKKKRFKDPNAPKRPSSAFFIFCADF 108
Query: 477 RKTFKEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSLESSNDADEEE 656
R K E P + DVAK+ GEKW +L E+K Y KA+ LK +Y K + + + +
Sbjct: 109 RPQVKGETPGLSIGDVAKKLGEKWNNLTAEDKVPYEKKASRLKEKYEKDITAYRNKGKVP 168
Query: 657 VDEEKEAT----DVDDADEKKQTDEAEENEGENKE 749
V +A D DD D+ DE ++++ + +
Sbjct: 169 VSMPAKAAAPAKDDDDDDDDDDDDEDDDDDDDEDD 203
>sp|Q05344|SSRP1_DROME FACT complex subunit Ssrp1 OS=Drosophila melanogaster
GN=Ssrp PE=1 SV=2
Length = 723
Score = 83 bits (204), Expect = 2e-015
Identities = 50/156 (32%), Positives = 80/156 (51%), Gaps = 10/156 (6%)
Frame = +3
Query: 330 AERKKSTSDEPKAKRVRKAKDENKKKSSS---SSSNKPKRPLTAFFIFMSDFRKTFKEEN 500
A++KK E K K+ +K K++ + K S S KPKR TAF ++++D R++ K EN
Sbjct: 518 AKKKKEKKSEKKEKKEKKHKEKERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESIKREN 577
Query: 501 PDAGVKDVAKQGGEKWKSLDEEEKKVYLDKAAELKVEYNKSLESSNDADEEEVDEEKEAT 680
P V ++AK+GGE WK L ++ K + D AA+ K Y+ + + + D EK
Sbjct: 578 PGIKVTEIAKKGGEMWKELKDKSK--WEDAAAKDKQRYHDEMRNYKPEAGGDSDNEK--- 632
Query: 681 DVDDADEKKQTDEAEENEGENKEAEGKEEEDEILDD 788
KK+ E ++ N G + ++ I DD
Sbjct: 633 --GGKSSKKRKTEPSPSKKANTSGSGFKSKEYISDD 666
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,294,077,499
Number of Sequences: 518415
Number of Extensions: 99294077499
Number of Successful Extensions: 638971466
Number of sequences better than 0.0: 0
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