Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN24035


BLASTX 7.6.2

Query= UN24035 /QuerySize=608
        (607 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|297796691|ref|XP_002866230.1| hypothetical protein ARALYDRAFT...    120   1e-025
gi|18424024|ref|NP_568865.1| uncharacterized protein [Arabidopsi...    117   9e-025
gi|21554937|gb|AAM63734.1| unknown [Arabidopsis thaliana]               94   9e-018

>gi|297796691|ref|XP_002866230.1| hypothetical protein ARALYDRAFT_918959
        [Arabidopsis lyrata subsp. lyrata]

          Length = 73

 Score =  120 bits (300), Expect = 1e-025
 Identities = 58/73 (79%), Positives = 67/73 (91%)
 Frame = +3

Query: 102 MRCRGLQVRRRKRVIINMSSRKLMTRLQQMVAPERIYSDEVDGNTLYRLTADHILLLQAR 281
           MRCR L +RRRKRV++N+SSRKLMTRL++MVAPE  +SDEVDG TLYRLTADHI LLQAR
Sbjct:   1 MRCRALNIRRRKRVMVNVSSRKLMTRLRRMVAPETSFSDEVDGATLYRLTADHIFLLQAR 60

Query: 282 VQLLRRISSLCGL 320
           +QLLRRISS+CGL
Sbjct:  61 IQLLRRISSVCGL 73

>gi|18424024|ref|NP_568865.1| uncharacterized protein [Arabidopsis thaliana]

          Length = 73

 Score =  117 bits (293), Expect = 9e-025
 Identities = 57/73 (78%), Positives = 66/73 (90%)
 Frame = +3

Query: 102 MRCRGLQVRRRKRVIINMSSRKLMTRLQQMVAPERIYSDEVDGNTLYRLTADHILLLQAR 281
           MRCR L +RRRKRV++N+SSRKLMTRL++MVAPE  +S EVDG TLYRLTADHI LLQAR
Sbjct:   1 MRCRALNIRRRKRVMVNVSSRKLMTRLRRMVAPETSFSGEVDGATLYRLTADHIFLLQAR 60

Query: 282 VQLLRRISSLCGL 320
           +QLLRRISS+CGL
Sbjct:  61 IQLLRRISSVCGL 73

>gi|21554937|gb|AAM63734.1| unknown [Arabidopsis thaliana]

          Length = 59

 Score =  94 bits (233), Expect = 9e-018
 Identities = 46/59 (77%), Positives = 54/59 (91%)
 Frame = +3

Query: 144 IINMSSRKLMTRLQQMVAPERIYSDEVDGNTLYRLTADHILLLQARVQLLRRISSLCGL 320
           ++N+SSRKLMTRL++MVAPE  +S EVDG TLYRLTADHI LLQAR+QLLRRISS+CGL
Sbjct:   1 MVNVSSRKLMTRLRRMVAPETSFSGEVDGATLYRLTADHIFLLQARIQLLRRISSVCGL 59

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,858,667,303,965
Number of Sequences: 15229318
Number of Extensions: 2858667303965
Number of Successful Extensions: 679566730
Number of sequences better than 0.0: 0