BLASTX 7.6.2
Query= UN24089 /QuerySize=1047
(1046 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297831128|ref|XP_002883446.1| predicted protein [Arabidopsis ... 123 5e-026
gi|297810421|ref|XP_002873094.1| predicted protein [Arabidopsis ... 108 2e-021
gi|297851804|ref|XP_002893783.1| predicted protein [Arabidopsis ... 101 4e-019
gi|297806309|ref|XP_002871038.1| predicted protein [Arabidopsis ... 99 1e-018
gi|297810423|ref|XP_002873095.1| predicted protein [Arabidopsis ... 94 4e-017
gi|145334285|ref|NP_001078524.1| RNA-binding (RRM/RBD/RNP motifs... 89 1e-015
gi|297810419|ref|XP_002873093.1| predicted protein [Arabidopsis ... 87 5e-015
gi|297849788|ref|XP_002892775.1| predicted protein [Arabidopsis ... 82 1e-013
gi|15242768|ref|NP_195968.1| RNA-binding (RRM/RBD/RNP motifs) fa... 79 1e-012
gi|7378635|emb|CAB83311.1| putative protein [Arabidopsis thaliana] 77 3e-012
gi|297792673|ref|XP_002864221.1| predicted protein [Arabidopsis ... 77 3e-012
gi|5923685|gb|AAD56336.1|AC009326_23 hypothetical protein [Arabi... 74 4e-011
gi|334185184|ref|NP_187528.2| RNA recognition motif-containing p... 74 4e-011
gi|297806867|ref|XP_002871317.1| predicted protein [Arabidopsis ... 73 6e-011
gi|9759064|dbj|BAB09542.1| unnamed protein product [Arabidopsis ... 73 8e-011
gi|297788920|ref|XP_002862489.1| predicted protein [Arabidopsis ... 70 4e-010
gi|297828670|ref|XP_002882217.1| predicted protein [Arabidopsis ... 70 4e-010
gi|297788311|ref|XP_002862284.1| predicted protein [Arabidopsis ... 65 2e-008
gi|340059764|emb|CCC54159.1| putative histone deacetylase 2 [Try... 56 1e-005
>gi|297831128|ref|XP_002883446.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 319
Score = 123 bits (308), Expect = 5e-026
Identities = 93/298 (31%), Positives = 146/298 (48%), Gaps = 43/298 (14%)
Frame = +2
Query: 56 NDGSDAEIRKSSIRRISVEGYDTSLRIEDVDEALRKHFASCGKIIHVYIPGNKEWTILCK 235
+ G+D++ + S +SVEGYDT LR + L KHFASCG+I ++Y+P + E IL
Sbjct: 32 DSGADSQTPRISSTTVSVEGYDTWLRKYPLKLVLEKHFASCGEITNIYVPTDFERGILKS 91
Query: 236 YAFVYFNEED-EEKALRLDGRDMGGQILQIKSYPFHETYLND--------VVDPMKDDNF 388
AF+ E EEKAL+L G D+GG +K P+ + +++D P
Sbjct: 92 VAFMRIEGEGAEEKALQLSGTDIGGWTAIVKPAPWQKVFMDDPRYAGPRCAAAPADTKTH 151
Query: 389 IMYQFKVEVAGYDNSLPLDVVEKEIKEYFSVNRPFAHHHKTSSAATEIKSYINLTGQEAV 568
+ + + GYD SLP ++ + ++FS S A ++I L G+ V
Sbjct: 152 M-----IRITGYDTSLPKIDMQIALYKHFSSCGSIWKVIVLKSGA----AFIYLEGERCV 202
Query: 569 DKALERSGRSVGGLSLVVTKVFP----IQYNPP----PTGYIPPRIYNTFTQEQKDNPNL 724
DKALE SGR++GG +LVV V P ++ P TGY P
Sbjct: 203 DKALELSGRNMGGSTLVVEPVVPRPDILKKRRPLACTTTGYTLPS--------------- 247
Query: 725 YYTIIERQQKKSEQKKSETKKKKKTKTRVGNQKKRSETTEGNQKKKKSKTKEGNQKKK 898
T++E +KK + + + K+K+K K + ++K E + +K+K+ K E + KK
Sbjct: 248 --TLLEVAKKKKKMETEKEKEKEKEKEKEKGKEKEKEKEKEKEKEKEKKMMEMVKNKK 303
>gi|297810421|ref|XP_002873094.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 262
Score = 108 bits (268), Expect = 2e-021
Identities = 93/269 (34%), Positives = 134/269 (49%), Gaps = 36/269 (13%)
Frame = +2
Query: 29 QSAMKG---LELND-GSD---AEIRKSSIRRISVEGYDTSLRIEDVDEALRKHFASCGKI 187
++A+KG LELND GSD + + ISVEGYDT LR + L KHFASCG+I
Sbjct: 3 ETAIKGLKLLELNDSGSDSGESNCCSCTSTTISVEGYDTWLRKYPLKLVLEKHFASCGEI 62
Query: 188 IHVYIPGNKEWTILCKYAFVYFNEED-EEKALRLDGRDMGGQILQIKSYPFHETYLND-- 358
++Y+P + E IL AF+ E EEKAL+L G D+GG +K P + +++D
Sbjct: 63 TNIYVPTDFERGILKSVAFMRIEGEGAEEKALQLSGTDVGGWTAIVKPAPSQKVFMDDPW 122
Query: 359 ------VVDPMKDDNFIMYQFKVEVAGYDNSLPLDVVEKEIKEYFSVNRPFAHHHKTSSA 520
P + + V GYD SLP ++ + ++FS SS
Sbjct: 123 YAGPRCAAAPADTKTHM-----IRVTGYDTSLPKIDMQIALYKHFSSCGSIWKVIVLSSG 177
Query: 521 ATEIKSYINLTGQEAVDKALERSGRSVGGLSLVVTKVFP----IQYNPP----PTGYIPP 676
A ++I L G+ VDKALE SGR++GG +LVV V P ++ P TGY P
Sbjct: 178 A----AFIYLEGERCVDKALELSGRNMGGSTLVVEPVVPRPDILKKRRPLACTTTGYTLP 233
Query: 677 RIYNTFTQEQKDNPNLYYTIIERQQKKSE 763
+T + K T +E +++K +
Sbjct: 234 ---STLLEVAKKKKKKMETEMEMEKEKEK 259
>gi|297851804|ref|XP_002893783.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 276
Score = 101 bits (249), Expect = 4e-019
Identities = 57/132 (43%), Positives = 78/132 (59%), Gaps = 1/132 (0%)
Frame = +2
Query: 86 SSIRRISVEGYDTSLRIEDVDEALRKHFASCGKIIHVYIPGNKEWTILCKYAFVYF-NEE 262
+S RI VEGYDTSL D+ ALRKHF+SCG+I H+Y+P + E IL +AF++ E
Sbjct: 56 TSFSRICVEGYDTSLHEYDLKLALRKHFSSCGEITHIYVPRDFERNILKSFAFIHIAGEG 115
Query: 263 DEEKALRLDGRDMGGQILQIKSYPFHETYLNDVVDPMKDDNFIMYQFKVEVAGYDNSLPL 442
EEKAL L G D GG + KS P+ Y++ + F + Q K+ V GYD SLP
Sbjct: 116 AEEKALALSGSDAGGWNVFAKSSPYDGQYVDPGRATAESPRFSLPQRKMIVTGYDTSLPE 175
Query: 443 DVVEKEIKEYFS 478
++ + +FS
Sbjct: 176 IDIQIRLSNHFS 187
>gi|297806309|ref|XP_002871038.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 248
Score = 99 bits (245), Expect = 1e-018
Identities = 70/198 (35%), Positives = 105/198 (53%), Gaps = 8/198 (4%)
Frame = +2
Query: 56 NDGSDAEIRKSSIRRISVEGYDTSLRIEDVDEALRKHFASCGKIIHVYIPGNKEWTILCK 235
+ G+D++ + S +SVEGYDT LR + L KHFASCG+I ++Y+P + E IL
Sbjct: 32 DSGADSQTPRISSTTVSVEGYDTWLRKYPLKLVLEKHFASCGEITNIYVPTDFERGILKS 91
Query: 236 YAFVYFNEED-EEKALRLDGRDMGGQILQIKSYPFHETYLND---VVDPMKDDNFIMYQF 403
AF+ E EEKAL+L G D+GG +K P + +++D
Sbjct: 92 VAFMRIEGEGAEEKALQLSGTDVGGWTAIVKPAPSQKVFMDDPWYAGPRCAAAPADTKTH 151
Query: 404 KVEVAGYDNSLPLDVVEKEIKEYFSVNRPFAHHHKTSSAATEIKSYINLTGQEAVDKALE 583
++ V GYD SLP ++ + ++FS + SS A +++ L G+ VDKALE
Sbjct: 152 RIRVTGYDTSLPEIDMQIALCKHFSSCGYVSKVIVLSSGA----AFLCLKGERCVDKALE 207
Query: 584 RSGRSVGGLSLVVTKVFP 637
S ++GG +LVV V P
Sbjct: 208 LSRCNMGGRTLVVEPVVP 225
>gi|297810423|ref|XP_002873095.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 227
Score = 94 bits (231), Expect = 4e-017
Identities = 65/155 (41%), Positives = 88/155 (56%), Gaps = 10/155 (6%)
Frame = +2
Query: 29 QSAMKG---LELNDGSDAEIRKSSIRRISVEGYDTSLRIEDVDEALRKHFASCGKIIHVY 199
+SA+KG LELND S A RK ISVEGYDT LR + AL KHFASCGKI +Y
Sbjct: 3 ESAIKGLKLLELND-SGAVSRKPRKTTISVEGYDTRLREYTLKLALEKHFASCGKITTIY 61
Query: 200 IPGNKEWTILCKYAFVYFNEED-EEKALRLDGRDMGGQILQIKSYPFHETYLNDVVDPMK 376
+P + + IL F++ +D EEKAL+L G D+GG +K P + D++DP
Sbjct: 62 VPRDYKRGILKSVTFMWIKGDDAEEKALQLSGTDVGGWTALVKPAPSQK----DIMDPWC 117
Query: 377 DDNFIMYQF-KVEVAGYDNSLPLDVVEKEIKEYFS 478
++ +V V GYD LP ++ + E+FS
Sbjct: 118 PAMLSKHETQRVRVTGYDTWLPEIDIQIALCEHFS 152
>gi|145334285|ref|NP_001078524.1| RNA-binding (RRM/RBD/RNP motifs) family
protein [Arabidopsis thaliana]
Length = 226
Score = 89 bits (219), Expect = 1e-015
Identities = 60/155 (38%), Positives = 85/155 (54%), Gaps = 9/155 (5%)
Frame = +2
Query: 29 QSAMKG---LELND-GSDAEIRKSSIRRISVEGYDTSLRIEDVDEALRKHFASCGKIIHV 196
+SA+KG L+LN+ G+++ + +ISVEGYDT LR V L KHFASCGKI H+
Sbjct: 3 ESAIKGMKLLQLNEIGANSRKPRIPWTKISVEGYDTRLREYTVKLVLEKHFASCGKITHI 62
Query: 197 YIPGNKEWTILCKYAFVYF-NEEDEEKALRLDGRDMGGQILQIKSYPFHETYLNDVVDPM 373
Y+P + E IL AF+ E EEKAL L G D GG +K + +++DP
Sbjct: 63 YVPRDFERGILKSVAFMCIKGEGGEEKALLLSGTDAGGWTAIVKP----ALWQKEIMDPW 118
Query: 374 KDDNFIMYQFKVEVAGYDNSLPLDVVEKEIKEYFS 478
+ +V V GYD +P ++ + E+FS
Sbjct: 119 LPGMPKLETHRVRVTGYDTCVPKIDIQMALCEHFS 153
>gi|297810419|ref|XP_002873093.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 161
Score = 87 bits (213), Expect = 5e-015
Identities = 47/116 (40%), Positives = 75/116 (64%), Gaps = 5/116 (4%)
Frame = +2
Query: 26 QQSAMKGLEL----NDGSDAEIRKSSIRRISVEGYDTSLRIEDVDEALRKHFASCGKIIH 193
++SA+KGL+L + G+D++ S+ ISVEGY+T+L+ + AL KHFASCGKI
Sbjct: 2 EESAIKGLKLLEFNDSGADSQTHSSTSTAISVEGYNTTLKEYPLRLALAKHFASCGKITQ 61
Query: 194 VYIPGNKEWTILCKYAFVYFNEED-EEKALRLDGRDMGGQILQIKSYPFHETYLND 358
+Y+P + + +L + +FV+ +D EEKAL+L G D+GG +K P + + +D
Sbjct: 62 IYVPRDFKKKLLKRASFVWIEGDDAEEKALQLSGTDVGGWTAIVKPVPSQKIFYDD 117
>gi|297849788|ref|XP_002892775.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 82 bits (202), Expect = 1e-013
Identities = 51/136 (37%), Positives = 82/136 (60%), Gaps = 8/136 (5%)
Frame = +2
Query: 86 SSIRRISVEGYDTSLRIEDVDEALRKHFASCGKIIHVYIPGNKEWTILCKYAFV-YFNEE 262
S++ RISVEGYDTS+ D+ ALRKHF+SCG++ +V +P + IL + A++ E
Sbjct: 12 STVCRISVEGYDTSVHAYDLKLALRKHFSSCGEVKNVNVPKDFVRGILKRCAYICIVGEG 71
Query: 263 DEEKALRLDGRDMGGQILQIKSYPFHETYLNDVVDPMKDDNFIMY----QFKVEVAGYDN 430
EKAL+L G D+ G + +K+ PFH + +DP + + Y ++++ V GYD
Sbjct: 72 ALEKALQLSGSDVRGWTISVKASPFH---IPMCIDPGRALVAVAYLSRQEYRMMVTGYDT 128
Query: 431 SLPLDVVEKEIKEYFS 478
SLP ++ + ++FS
Sbjct: 129 SLPELDIQIGLCKHFS 144
>gi|15242768|ref|NP_195968.1| RNA-binding (RRM/RBD/RNP motifs) family protein
[Arabidopsis thaliana]
Length = 321
Score = 79 bits (193), Expect = 1e-012
Identities = 45/103 (43%), Positives = 64/103 (62%), Gaps = 5/103 (4%)
Frame = +2
Query: 38 MKGLELNDGSDAEIRKSSIRRISVEGYDTSLRIEDVDEALRKHFASCGKIIHVYIPGNKE 217
+K LELND ++S+ I VEGYDTSL+ + AL KHFASCG+I +Y+P + +
Sbjct: 9 LKSLELNDSD----KQSTSTAICVEGYDTSLKEYPLRLALTKHFASCGEITQIYVPRDFK 64
Query: 218 WTILCKYAFVYFNEED-EEKALRLDGRDMGGQILQIKSYPFHE 343
IL +F++ E E+KAL+L G D+GG + +K P HE
Sbjct: 65 KKILKSVSFMWIKGEGAEDKALQLSGTDVGGWTVIVKPKPKHE 107
Score = 72 bits (175), Expect = 1e-010
Identities = 51/132 (38%), Positives = 70/132 (53%), Gaps = 4/132 (3%)
Frame = +2
Query: 86 SSIRRISVEGYDTSLRIEDVDEALRKHFASCGKIIHVYIPGNKEWTILCKYAFVYFNEED 265
S I ISVEGYDTSL+ ++ L KHF SCG+I HVY+P + E +L AF+ E
Sbjct: 110 SPITTISVEGYDTSLQKYLLELILEKHFDSCGEIRHVYVPTDYERGVLKSVAFLRIEGEG 169
Query: 266 -EEKALRLDGRDMGGQILQIKSYPFHETYLNDVVDPMKDDNFIMYQFKVEVAGYDNSLPL 442
E+KAL+L G D+ G + +K P Y N P + V GYD SLP
Sbjct: 170 AEDKALQLSGTDVVGWTVIVK--PSEIFYDNSSRAPATTPEASKIH-RFRVTGYDASLPE 226
Query: 443 DVVEKEIKEYFS 478
++ + ++FS
Sbjct: 227 IDIQMALCKHFS 238
>gi|7378635|emb|CAB83311.1| putative protein [Arabidopsis thaliana]
Length = 248
Score = 77 bits (189), Expect = 3e-012
Identities = 50/137 (36%), Positives = 68/137 (49%), Gaps = 5/137 (3%)
Frame = +2
Query: 71 AEIRKSSIRRISVEGYDTSLRIEDVDEALRKHFASCGKIIHVYIPGNKEWTILCKYAFVY 250
A I + + GYDT LR V L KHFASCGKI H+Y+P + E IL AF+
Sbjct: 4 AAIERDWCKLSKAPGYDTRLREYTVKLVLEKHFASCGKITHIYVPRDFERGILKSVAFMC 63
Query: 251 F-NEEDEEKALRLDGRDMGGQILQIKSYPFHETYLNDVVDPMKDDNFIMYQFKVEVAGYD 427
E EEKAL L G D GG +K + +++DP + +V V GYD
Sbjct: 64 IKGEGGEEKALLLSGTDAGGWTAIVKP----ALWQKEIMDPWLPGMPKLETHRVRVTGYD 119
Query: 428 NSLPLDVVEKEIKEYFS 478
+P ++ + E+FS
Sbjct: 120 TCVPKIDIQMALCEHFS 136
>gi|297792673|ref|XP_002864221.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 240
Score = 77 bits (189), Expect = 3e-012
Identities = 71/211 (33%), Positives = 108/211 (51%), Gaps = 20/211 (9%)
Frame = +2
Query: 83 KSSIRRISVEGYDTSLRIEDVDEALRKHFASCGKIIHVYIPGNKEWTILCKYAFV-YFNE 259
+ SI ISVEGYDTSL + ALRKHFASCGKI +++P + + IL F+ ++ E
Sbjct: 17 RKSISTISVEGYDTSLHGYPLKLALRKHFASCGKIASMFVPRDFKRGILKSPLFIDFWGE 76
Query: 260 EDEEKALRLDGRDMGGQILQIKSYPFHETYLNDVVDPMKDDNFIMYQFKVEVAGYDNSLP 439
+KAL L G D+G + +K+ P E Y DP NF + ++ V YD LP
Sbjct: 77 GARDKALELSGSDVGRWNVVVKAVPRQEDY----YDP-AGFNFFRGERELVVKVYD--LP 129
Query: 440 LDVVEKEIK----EYFS----VNRPFAHHHKTSSAATEIKSYINLTGQEAVDKALERSGR 595
V + +++ ++FS V H + + I++ G+ V+KA + SG+
Sbjct: 130 SSVRKIDVQIGLCKHFSSCGEVTCVTVLVH--GIFVHQRNTIISIMGEGCVEKAQQLSGQ 187
Query: 596 -SVGGLSLVVTKVFPIQYNP-PPTGYIPPRI 682
+ G ++VV V P+ + PTG P I
Sbjct: 188 CNTDGWNIVVDSVVPLSADKRKPTGCEHPSI 218
>gi|5923685|gb|AAD56336.1|AC009326_23 hypothetical protein [Arabidopsis
thaliana]
Length = 198
Score = 74 bits (180), Expect = 4e-011
Identities = 45/102 (44%), Positives = 62/102 (60%), Gaps = 4/102 (3%)
Frame = +2
Query: 35 AMKGLELNDGSDAEIRKSSIRRISVEGYDTSLRIEDVDEALRKHFASCGKIIHVYIPGNK 214
A KGLE+ +IR S I RISV GYD L E V+ L+K F+ CG+I V+IP +
Sbjct: 5 ANKGLEVK--RSRKIRDSDIERISVTGYDIELPREHVESELKKLFSPCGEITDVHIPETR 62
Query: 215 EWTILCKYAFVYF-NEEDEEKALRLDGRDMGGQILQIKSYPF 337
+ L +AF+YF E +KAL+L+G DMGG + ++ PF
Sbjct: 63 N-SSLWSHAFIYFVGEGTADKALQLNGSDMGGWTVDAEADPF 103
>gi|334185184|ref|NP_187528.2| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 132
Score = 74 bits (180), Expect = 4e-011
Identities = 45/102 (44%), Positives = 62/102 (60%), Gaps = 4/102 (3%)
Frame = +2
Query: 35 AMKGLELNDGSDAEIRKSSIRRISVEGYDTSLRIEDVDEALRKHFASCGKIIHVYIPGNK 214
A KGLE+ +IR S I RISV GYD L E V+ L+K F+ CG+I V+IP +
Sbjct: 5 ANKGLEVK--RSRKIRDSDIERISVTGYDIELPREHVESELKKLFSPCGEITDVHIPETR 62
Query: 215 EWTILCKYAFVYF-NEEDEEKALRLDGRDMGGQILQIKSYPF 337
+ L +AF+YF E +KAL+L+G DMGG + ++ PF
Sbjct: 63 N-SSLWSHAFIYFVGEGTADKALQLNGSDMGGWTVDAEADPF 103
>gi|297806867|ref|XP_002871317.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 313
Score = 73 bits (178), Expect = 6e-011
Identities = 53/153 (34%), Positives = 78/153 (50%), Gaps = 6/153 (3%)
Frame = +2
Query: 35 AMKGLELNDGSDAEIRKSSIRRISVEGYDTSLRIEDVDEALRKHFASCGKIIHVYIPGNK 214
A K +EL G DA+IRK S SV GYDTS+ D++ ALRKHFASCG+I I +
Sbjct: 5 AAKEMELM-GHDADIRKRSCISFSVTGYDTSVAYYDLNRALRKHFASCGRIRQCCISRDP 63
Query: 215 EWTILCKYAFVYFNEEDEE--KALRLDGRDMGGQILQIKSYPFHETYL---NDVVDPMKD 379
E L +A++ E K L L+G D GG L +++ P + ++
Sbjct: 64 ERGYLSSFAWMAIRGEKGTGGKVLDLNGSDFGGCKLFVEASPSQGPNIELSSEAAAVRSA 123
Query: 380 DNFIMYQFKVEVAGYDNSLPLDVVEKEIKEYFS 478
+ + V V+G+D LP +E ++ +FS
Sbjct: 124 RSRLFRSIIVSVSGFDPWLPEHDLESSLRRHFS 156
>gi|9759064|dbj|BAB09542.1| unnamed protein product [Arabidopsis thaliana]
Length = 248
Score = 73 bits (177), Expect = 8e-011
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 11/139 (7%)
Frame = +2
Query: 62 GSDAEIRKSSIRRISVEGYDTSLRIEDVDEALRKHFASCGKIIHVYIPGNKEWTILCKYA 241
GS E + S +ISVEGYDTS+ + AL KHFASCGKI+ + +P + + IL
Sbjct: 7 GSGIEGYEQSFSKISVEGYDTSVHEFPLKLALAKHFASCGKIVDIDVPRDFKKRILKSPL 66
Query: 242 FVYFNEEDEE----KALRLDGRDMGGQILQIKSYPFHETYLN-DVVDPMKDDNFIMYQFK 406
F+ F+ ++ E KAL L G D+GG + +KS P + Y + VD K + ++
Sbjct: 67 FIIFHAKEGESPVDKALELSGTDVGGWNVVVKSLPGQQMYRDPGGVDRFKGERTLI---- 122
Query: 407 VEVAGYDNSLPLDVVEKEI 463
V YD L ++ +I
Sbjct: 123 --VKVYDTPSTLSKIDLQI 139
>gi|297788920|ref|XP_002862489.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 156
Score = 70 bits (171), Expect = 4e-010
Identities = 50/129 (38%), Positives = 72/129 (55%), Gaps = 8/129 (6%)
Frame = +2
Query: 83 KSSIRRISVEGYDTSLRIEDVDEALRKHFASCGKIIHVYIPGNKEWTILCKYAFV-YFNE 259
+ SI ISVEGYDTSL + ALRKHFASCGKI +++P + + IL F+ ++ E
Sbjct: 17 RKSISTISVEGYDTSLHGYPLKLALRKHFASCGKIASMFVPRDFKRGILKSPLFIDFWGE 76
Query: 260 EDEEKALRLDGRDMGGQILQIKSYPFHETYLNDVVDPMKDDNFIMYQFKVEVAGYDNSLP 439
+KAL L G D+G + +K+ P E Y DP NF + ++ V YD LP
Sbjct: 77 GARDKALELSGSDVGRWNVVVKAVPRQEDY----YDP-AGFNFFRGERELVVKVYD--LP 129
Query: 440 LDVVEKEIK 466
V + +++
Sbjct: 130 SSVRKIDVQ 138
>gi|297828670|ref|XP_002882217.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 195
Score = 70 bits (171), Expect = 4e-010
Identities = 48/103 (46%), Positives = 63/103 (61%), Gaps = 6/103 (5%)
Frame = +2
Query: 56 NDGSDA-EIRKSSIRRISVEGYDTSLRIEDVDEALRKHFASCGKIIHVYIPGNKEWTILC 232
++GSDA I K RI VEGYDTS+ D++ AL KHF+SCG+I H+YIP N E IL
Sbjct: 6 SNGSDASNIPKD---RIRVEGYDTSIYEYDLELALTKHFSSCGEISHIYIPRNFEKGILK 62
Query: 233 KYAFVYFNEEDE-EKALRLDGRDM-GGQILQIKSYPFHETYLN 355
+AFV F E EKAL L + GG + + PF+ Y++
Sbjct: 63 SFAFVDFATEGAVEKALNLSRSAVEGGWRVFAEESPFNGDYID 105
>gi|297788311|ref|XP_002862284.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 65 bits (157), Expect = 2e-008
Identities = 34/64 (53%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = +2
Query: 56 NDGSDAEIRKSSIRRISVEGYDTSLRIEDVDEALRKHFASCGKIIHVYIPGNKEWTILCK 235
ND SD R+ RISVEGY+TSL D+ AL KHFASCGKII +Y+P N E + +
Sbjct: 7 NDASDIPKRR-GFSRISVEGYETSLHAYDLKLALTKHFASCGKIISIYVPRNAEKDTIQR 65
Query: 236 YAFV 247
+ FV
Sbjct: 66 FDFV 69
>gi|340059764|emb|CCC54159.1| putative histone deacetylase 2 [Trypanosoma vivax
Y486]
Length = 683
Score = 56 bits (133), Expect = 1e-005
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +1
Query: 742 ETAEEE*AEEE*DEEEEED*DQGGKSEEEE*DHGGKSEEEEEQDQGGKSEEKG 900
E EEE EEE +EEEEED ++ G+ EEEE + G+ EEEEE+D + EE+G
Sbjct: 594 EEEEEEDGEEEEEEEEEEDGEEDGEEEEEEEEEDGEEEEEEEEDGEEEEEEEG 646
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,858,667,303,965
Number of Sequences: 15229318
Number of Extensions: 2858667303965
Number of Successful Extensions: 679566730
Number of sequences better than 0.0: 0
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