BLASTX 7.6.2
Query= UN24177 /QuerySize=1063
(1062 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G03480.1 | Symbols: | nucleic acid binding / ... 100 2e-021
TAIR9_protein||AT5G53700.1 | Symbols: | INVOLVED IN: biological... 87 2e-017
TAIR9_protein||AT5G03495.1 | Symbols: | nucleotide binding | ch... 71 9e-013
TAIR9_protein||AT1G48920.1 | Symbols: ATNUC-L1, PARL1 | ATNUC-L1... 67 1e-011
TAIR9_protein||AT3G09160.1 | Symbols: | RNA recognition motif (... 67 2e-011
TAIR9_protein||AT4G24420.1 | Symbols: | RNA recognition motif (... 59 5e-009
TAIR9_protein||AT1G72800.1 | Symbols: | nuM1-related | chr1:273... 58 8e-009
TAIR9_protein||AT3G18610.1 | Symbols: ATRANGAP1, PARLL1 | ATRANG... 54 1e-007
TAIR9_protein||AT1G73490.1 | Symbols: | RNA recognition motif (... 50 2e-006
TAIR9_protein||AT5G05430.1 | Symbols: | FUNCTIONS IN: molecular... 48 8e-006
>TAIR9_protein||AT5G03480.1 | Symbols: | nucleic acid binding / nucleotide
binding | chr5:869208-870855 REVERSE
Length = 322
Score = 100 bits (248), Expect = 2e-021
Identities = 68/180 (37%), Positives = 93/180 (51%), Gaps = 9/180 (5%)
Frame = +2
Query: 164 PRAMISVEGYDPCLPEDDLKNELINHFKSCGEVFNVILREDPDSPNLDRRALVILLGEGA 343
P ISVEGYD L + L+ L HF SCGE+ +V + D + L A + + GEGA
Sbjct: 111 PITTISVEGYDTSLQKYLLELILEKHFDSCGEIRHVYVPTDYERGVLKSVAFLRIEGEGA 170
Query: 344 EEKALQLNGTDIGGWKALVKVEPEEERDEEADLYRSSLADEIYNDRRFWFGVAVRGYDTS 523
E+KALQL+GTD+ GW +VK + + A +I+ R V GYD S
Sbjct: 171 EDKALQLSGTDVVGWTVIVKPSEIFYDNSSRAPATTPEASKIHRFR-------VTGYDAS 223
Query: 524 LPADEVESALTKHFSSCGEITHVFVSTLDKKTNIYFHEKEGEARALDLCGTEVGGSKIAV 703
LP +++ AL KHFSSCGEI V V L + + +AL+L G +G + V
Sbjct: 224 LPEIDIQMALCKHFSSCGEIWQVTV--LSSTAFVSLRGERCVDKALELSGCNMGERTLVV 281
Score = 77 bits (188), Expect = 2e-014
Identities = 38/82 (46%), Positives = 51/82 (62%)
Frame = +2
Query: 176 ISVEGYDPCLPEDDLKNELINHFKSCGEVFNVILREDPDSPNLDRRALVILLGEGAEEKA 355
I VEGYD L E L+ L HF SCGE+ + + D L + + + GEGAE+KA
Sbjct: 26 ICVEGYDTSLKEYPLRLALTKHFASCGEITQIYVPRDFKKKILKSVSFMWIKGEGAEDKA 85
Query: 356 LQLNGTDIGGWKALVKVEPEEE 421
LQL+GTD+GGW +VK +P+ E
Sbjct: 86 LQLSGTDVGGWTVIVKPKPKHE 107
Score = 57 bits (137), Expect = 1e-008
Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Frame = +2
Query: 497 VAVRGYDTSLPADEVESALTKHFSSCGEITHVFV-----STLDKKTNIYFHEKEG-EARA 658
+ V GYDTSL + ALTKHF+SCGEIT ++V + K + + + EG E +A
Sbjct: 26 ICVEGYDTSLKEYPLRLALTKHFASCGEITQIYVPRDFKKKILKSVSFMWIKGEGAEDKA 85
Query: 659 LDLCGTEVGGSKIAV 703
L L GT+VGG + V
Sbjct: 86 LQLSGTDVGGWTVIV 100
>TAIR9_protein||AT5G53700.1 | Symbols: | INVOLVED IN: biological_process
unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis
thaliana protein match is: nucleic acid binding / nucleotide binding
(TAIR:AT5G03480.1); Has 74 Blast hits to 54 proteins in 11 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 68; Viruses
- 0; Other Eukaryotes - 6 (source: NCBI BLink). |
chr5:21801221-21802546 FORWARD
Length = 252
Score = 87 bits (214), Expect = 2e-017
Identities = 67/204 (32%), Positives = 97/204 (47%), Gaps = 32/204 (15%)
Frame = +2
Query: 176 ISVEGYDPCLPEDDLKNELINHFKSCGEVFNVILREDPDSPNLDRRALVIL---LGEGAE 346
ISVEGYD + E LK L HF SCG++ ++ + D L +I GE
Sbjct: 23 ISVEGYDTSVHEFPLKLALAKHFASCGKIVDIDVPRDFKKRILKSPLFIIFHAKEGESPV 82
Query: 347 EKALQLNGTDIGGWKALVKVEPEEERDEEADLYRSSLADEIYNDRRFWFGVAVRGYDT-- 520
+KAL+L+GTD+GGW +VK P ++ +YR + + R + V+ YDT
Sbjct: 83 DKALELSGTDVGGWNVVVKSLPGQQ------MYRDPGGVDRFKGER---TLIVKVYDTPS 133
Query: 521 SLPADEVESALTKHFSSCGEITHVFVSTLDKKTNIYFHEKEGEA---------RALDLCG 673
+L +++ L KHFSSCGE+T + V N+ HE + +AL+L G
Sbjct: 134 TLSKIDLQIGLCKHFSSCGEVTGISVLV---HGNLCCHESKARVDIMGKGCVDKALELSG 190
Query: 674 TEVGGSKIAVCLLATIFTNRPPPG 745
G KI V + PP G
Sbjct: 191 RTADGWKIVVYFVV------PPAG 208
Score = 62 bits (148), Expect = 7e-010
Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 9/100 (9%)
Frame = +2
Query: 473 NDRRFWFGVAVRGYDTSLPADEVESALTKHFSSCGEITHVFVSTLDKK------TNIYFH 634
N+R+ + ++V GYDTS+ ++ AL KHF+SCG+I + V KK I FH
Sbjct: 15 NNRKCFSKISVEGYDTSVHEFPLKLALAKHFASCGKIVDIDVPRDFKKRILKSPLFIIFH 74
Query: 635 EKEGEA---RALDLCGTEVGGSKIAVCLLATIFTNRPPPG 745
KEGE+ +AL+L GT+VGG + V L R P G
Sbjct: 75 AKEGESPVDKALELSGTDVGGWNVVVKSLPGQQMYRDPGG 114
>TAIR9_protein||AT5G03495.1 | Symbols: | nucleotide binding |
chr5:873804-875025 REVERSE
Length = 227
Score = 71 bits (173), Expect = 9e-013
Identities = 38/80 (47%), Positives = 49/80 (61%)
Frame = +2
Query: 164 PRAMISVEGYDPCLPEDDLKNELINHFKSCGEVFNVILREDPDSPNLDRRALVILLGEGA 343
P ISVEGYD L E +K L HF SCG++ ++ + D + L A + + GEG
Sbjct: 27 PWTKISVEGYDTRLREYTVKLVLEKHFASCGKITHIYVPRDFERGILKSVAFMCIKGEGG 86
Query: 344 EEKALQLNGTDIGGWKALVK 403
EEKAL L+GTD GGW A+VK
Sbjct: 87 EEKALLLSGTDAGGWTAIVK 106
Score = 63 bits (152), Expect = 2e-010
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 10/89 (11%)
Frame = +2
Query: 176 ISVEGYDPCLPEDDLKNELINHFKSCGEVFNVILREDPDSPNLDRRALVILLGEGAEEKA 355
+ V GYD C+P+ D++ L HF SCGEV V++ + L GE E+KA
Sbjct: 130 VRVTGYDTCVPKIDIQMALCEHFSSCGEVTQVVVLPSGSGS-------IYLQGERCEDKA 182
Query: 356 LQLNGTDIGGWKALVK---VEPEEERDEE 433
LQLNG +GG +V+ +EPE+ + E+
Sbjct: 183 LQLNGCKMGGMNLVVESVLIEPEDLKKEK 211
Score = 55 bits (131), Expect = 7e-008
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +2
Query: 497 VAVRGYDTSLPADEVESALTKHFSSCGEITHVFVSTLDKKTNIYFHEKEGEARALDLCGT 676
V V GYDT +P +++ AL +HFSSCGE+T V V +IY + E +AL L G
Sbjct: 130 VRVTGYDTCVPKIDIQMALCEHFSSCGEVTQVVVLP-SGSGSIYLQGERCEDKALQLNGC 188
Query: 677 EVGGSKIAV 703
++GG + V
Sbjct: 189 KMGGMNLVV 197
Score = 54 bits (127), Expect = 2e-007
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Frame = +2
Query: 488 WFGVAVRGYDTSLPADEVESALTKHFSSCGEITHVFV------STLDKKTNIYFHEKEGE 649
W ++V GYDT L V+ L KHF+SCG+ITH++V L + + GE
Sbjct: 28 WTKISVEGYDTRLREYTVKLVLEKHFASCGKITHIYVPRDFERGILKSVAFMCIKGEGGE 87
Query: 650 ARALDLCGTEVGG 688
+AL L GT+ GG
Sbjct: 88 EKALLLSGTDAGG 100
>TAIR9_protein||AT1G48920.1 | Symbols: ATNUC-L1, PARL1 | ATNUC-L1; nucleic acid
binding / nucleotide binding | chr1:18098186-18101422 FORWARD
Length = 558
Score = 67 bits (163), Expect = 1e-011
Identities = 38/84 (45%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Frame = +2
Query: 176 ISVEGYDPCLPEDDLKNELINHFKSCGEVFNVILREDPDSPNLDRRALVILLGEGAEEKA 355
I V+G+D L EDD+KN L HF SCGE+ NV + D D+ N + + L +EKA
Sbjct: 403 IFVKGFDASLSEDDIKNTLREHFSSCGEIKNVSVPIDRDTGN--SKGIAYLEFSEGKEKA 460
Query: 356 LQLNGTDIGGWKALVKVEPEEERD 427
L+LNG+D+GG LV EP D
Sbjct: 461 LELNGSDMGGGFYLVVDEPRPRGD 484
Score = 67 bits (163), Expect = 1e-011
Identities = 49/160 (30%), Positives = 81/160 (50%), Gaps = 13/160 (8%)
Frame = +2
Query: 236 NHFKSCGEVFNVILREDPDSPNLDRRALVILLGEGAEEKALQLNGTDIGGWKALVKVEPE 415
N FK GEV +V + D + V +KAL+ +G + G + ++++
Sbjct: 315 NFFKEAGEVVDVRFSTNRDDGSFRGFGHVEFASSEEAQKALEFHGRPLLGRE--IRLDIA 372
Query: 416 EERDEEADLYRSSLADEIYNDRRFWFG-----VAVRGYDTSLPADEVESALTKHFSSCGE 580
+ER E + R + + N R G + V+G+D SL D++++ L +HFSSCGE
Sbjct: 373 QERGERGE--RPAFTPQSGNFRSGGDGGDEKKIFVKGFDASLSEDDIKNTLREHFSSCGE 430
Query: 581 ITHVFV----STLDKKTNIYFHEKEGEARALDLCGTEVGG 688
I +V V T + K Y EG+ +AL+L G+++GG
Sbjct: 431 IKNVSVPIDRDTGNSKGIAYLEFSEGKEKALELNGSDMGG 470
>TAIR9_protein||AT3G09160.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:2805779-2806912 REVERSE
Length = 199
Score = 67 bits (162), Expect = 2e-011
Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Frame = +2
Query: 110 ARKAVAARKASLEKYRCKPRAMISVEGYDPCLPEDDLKNELINHFKSCGEVFNVILREDP 289
A K + +++ K R ISV GYD LP + +++EL F CGE+ +V + E
Sbjct: 5 ANKGLEVKRS--RKIRDSDIERISVTGYDIELPREHVESELKKLFSPCGEITDVHIPETR 62
Query: 290 DSPNLDRRALVILLGEGAEEKALQLNGTDIGGWKALVKVEP-EEERDEEADLY 445
+S +L A + +GEG +KALQLNG+D+GGW + +P +E D + +Y
Sbjct: 63 NS-SLWSHAFIYFVGEGTADKALQLNGSDMGGWTVDAEADPFPKEEDNFSIVY 114
Score = 51 bits (121), Expect = 1e-006
Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Frame = +2
Query: 497 VAVRGYDTSLPADEVESALTKHFSSCGEITHVFV-----STLDKKTNIYFHEKEGEARAL 661
++V GYD LP + VES L K FS CGEIT V + S+L IYF + +AL
Sbjct: 25 ISVTGYDIELPREHVESELKKLFSPCGEITDVHIPETRNSSLWSHAFIYFVGEGTADKAL 84
Query: 662 DLCGTEVGG 688
L G+++GG
Sbjct: 85 QLNGSDMGG 93
>TAIR9_protein||AT4G24420.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr4:12627096-12627359 FORWARD
Length = 88
Score = 59 bits (141), Expect = 5e-009
Identities = 26/65 (40%), Positives = 41/65 (63%)
Frame = +2
Query: 218 LKNELINHFKSCGEVFNVILREDPDSPNLDRRALVILLGEGAEEKALQLNGTDIGGWKAL 397
+K L NHFKSCG + V R P++ ++ A + ++G A+EK + LNG+++GG K +
Sbjct: 1 MKEALTNHFKSCGVIAMVSFRRHPETDVVNGLATITMMGNDADEKVMLLNGSELGGRKLV 60
Query: 398 VKVEP 412
VK P
Sbjct: 61 VKANP 65
>TAIR9_protein||AT1G72800.1 | Symbols: | nuM1-related | chr1:27397266-27398273
FORWARD
Length = 336
Score = 58 bits (139), Expect = 8e-009
Identities = 42/108 (38%), Positives = 55/108 (50%), Gaps = 8/108 (7%)
Frame = +2
Query: 446 RSSLADEIYNDRRFWFGVAVRGYDTSLPADEVESALTKHFSSCGEITHVFV----STLDK 613
+ SL N R F +V G+D SLP D+++SAL+K+FSS GEIT VFV T
Sbjct: 223 KDSLFSVGVNGRSF----SVTGFDASLPVDDIKSALSKYFSSFGEITRVFVPPSHGTGGS 278
Query: 614 KTNIYFHEKEGEARALDLCGTEVGGSKIAVCLLATIFTNRPPPGGGIC 757
Y KEG +AL+L +VGG + V I + P G C
Sbjct: 279 LGYAYIDLKEGAEKALELGRHDVGGWDLVVGKAEPIRSGSTWPFPGRC 326
>TAIR9_protein||AT3G18610.1 | Symbols: ATRANGAP1, PARLL1 | ATRANGAP1 (RAN
GTPASE-ACTIVATING PROTEIN 1); nucleic acid binding / nucleotide binding
| chr3:6404270-6407822 REVERSE
Length = 637
Score = 54 bits (128), Expect = 1e-007
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Frame = +2
Query: 176 ISVEGYDPCLPEDDLKNELINHFKSCGEVFNVILREDPDSPNLDRRALVILLGEGAEEKA 355
I V G+ L ED++K EL +HF CGEV V + D ++ R I L G +E A
Sbjct: 481 IYVRGFSSSLGEDEIKKELRSHFSKCGEVTRVHVPTDRET-GASRGFAYIDLTSGFDE-A 538
Query: 356 LQLNGTDIGGWKALVKVEPEEERDEEADLYRSS 454
LQL+G++IGG + EE R ++D RSS
Sbjct: 539 LQLSGSEIGGG----NIHVEESRPRDSDEGRSS 567
>TAIR9_protein||AT1G73490.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:27633496-27634867 REVERSE
Length = 260
Score = 50 bits (119), Expect = 2e-006
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Frame = +2
Query: 503 VRGYDTSLPADEVESALTKHFSSCGEITHVFV---STLDKKTNIYFHEKEGEARALDLCG 673
V+G+DTS P E+++AL HFSSCG++ ++V + F + + E + L L G
Sbjct: 121 VQGFDTSHPRHEIKTALWNHFSSCGKVYLIYVPIACSTGASVGYAFIDMKNETKGLTLNG 180
Query: 674 TEVGGSKIAV 703
+ +GG KI V
Sbjct: 181 SHLGGRKIDV 190
>TAIR9_protein||AT5G05430.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: stem, leaf; EXPRESSED DURING:
LP.04 four leaves visible; BEST Arabidopsis thaliana protein match is:
RNA recognition motif (RRM)-containing protein (TAIR:AT3G09160.1); Has
23 Blast hits to 21 proteins in 1 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr5:1605275-1606703 REVERSE
Length = 159
Score = 48 bits (113), Expect = 8e-006
Identities = 20/42 (47%), Positives = 29/42 (69%)
Frame = +2
Query: 497 VAVRGYDTSLPADEVESALTKHFSSCGEITHVFVSTLDKKTN 622
+ V GYDT LP D++ +AL +HFSSCGEI +++ +TN
Sbjct: 25 IKVTGYDTGLPLDDLYTALAEHFSSCGEIWEIYIPLKFDETN 66
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,447,042,010
Number of Sequences: 33410
Number of Extensions: 12447042010
Number of Successful Extensions: 397271338
Number of sequences better than 0.0: 0
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