Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN24197


BLASTX 7.6.2

Query= UN24197 /QuerySize=711
        (710 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|297831122|ref|XP_002883443.1| hypothetical protein ARALYDRAFT...     85   1e-014
gi|297810117|ref|XP_002872942.1| predicted protein [Arabidopsis ...     74   2e-011
gi|297810119|ref|XP_002872943.1| predicted protein [Arabidopsis ...     73   4e-011
gi|297842948|ref|XP_002889355.1| hypothetical protein ARALYDRAFT...     69   4e-010
gi|297848378|ref|XP_002892070.1| hypothetical protein ARALYDRAFT...     69   7e-010
gi|297817724|ref|XP_002876745.1| hypothetical protein ARALYDRAFT...     68   1e-009
gi|224124918|ref|XP_002319457.1| predicted protein [Populus tric...     67   3e-009
gi|224124930|ref|XP_002319460.1| predicted protein [Populus tric...     66   5e-009
gi|297820316|ref|XP_002878041.1| hypothetical protein ARALYDRAFT...     66   5e-009
gi|42568141|ref|NP_198414.2| Putative endonuclease or glycosyl h...     65   1e-008
gi|15229336|ref|NP_191844.1| zinc finger protein-like protein [A...     63   4e-008
gi|225437724|ref|XP_002273252.1| PREDICTED: hypothetical protein...     62   9e-008
gi|297744055|emb|CBI37025.3| unnamed protein product [Vitis vini...     62   9e-008
gi|297790772|ref|XP_002863271.1| predicted protein [Arabidopsis ...     61   1e-007
gi|255548285|ref|XP_002515199.1| hypothetical protein RCOM_13439...     60   2e-007
gi|9758689|dbj|BAB09305.1| unnamed protein product [Arabidopsis ...     59   4e-007
gi|9294534|dbj|BAB02797.1| unnamed protein product [Arabidopsis ...     58   1e-006
gi|297821196|ref|XP_002878481.1| predicted protein [Arabidopsis ...     57   2e-006

>gi|297831122|ref|XP_002883443.1| hypothetical protein ARALYDRAFT_342502
        [Arabidopsis lyrata subsp. lyrata]

          Length = 454

 Score =  85 bits (208), Expect = 1e-014
 Identities = 44/103 (42%), Positives = 67/103 (65%), Gaps = 3/103 (2%)
 Frame = +2

Query: 230 SKKTGVWWDLNTCPLPAGFDPRWVRPCIESAVEEEIGFRTEVTIYAMGNLEYISIDLLEK 409
           + KT VWWD++TCP+P G+D   VRP IE A+ +E+G+   VTI AMGNL+  +   L++
Sbjct:  11 NSKTAVWWDMDTCPVPDGYDAGRVRPIIEGAL-KELGYYGPVTITAMGNLKEATAHFLQR 69

Query: 410 ISSSGIILTHSPCVGKGLMLFMDDWFGDDFSNPHPPGYVMIIS 538
           +SS+GI++ H+     G ++F D    +  SN  PP  +M+IS
Sbjct:  70 LSSTGIVVQHAITDCVGTLIFSD--LMEFKSNNLPPATIMLIS 110


 Score =  78 bits (191), Expect = 9e-013
 Identities = 43/104 (41%), Positives = 66/104 (63%), Gaps = 5/104 (4%)
 Frame = +2

Query: 227 VSKKTGVWWDLNTCPLPAGFDPRWVRPCIESAVEEEIGFRTEVTIYAMGNLEYISIDLLE 406
           V+ KT VWWD++TCP+P G+D R VRP IE A+ +++G+   +TI AMGNLE     +L+
Sbjct: 224 VNSKTAVWWDMDTCPVPDGYDARRVRPSIEGAL-KDLGYCGPITITAMGNLENAHPHVLQ 282

Query: 407 KISSSGIILTHSPCVGKGLMLFMDDWFGDDFSNPHPPGYVMIIS 538
            +SS+ I++ H+  VG  +   +  +      NP PP  +M+IS
Sbjct: 283 GLSSTRILVQHTRRVGAYIFSNLTHF---KAHNP-PPATIMLIS 322

>gi|297810117|ref|XP_002872942.1| predicted protein [Arabidopsis lyrata subsp.
        lyrata]

          Length = 192

 Score =  74 bits (179), Expect = 2e-011
 Identities = 40/104 (38%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
 Frame = +2

Query: 218 GGDVSKKTGVWWDLNTCPLPAGFDPRWVRPCIESAVEEEIGFRTEVTIYAMGNLEYISID 397
           G +    T V+WD+   P+P GFD R VRPCI   +E   G+   +TIYA+G L  + +D
Sbjct:   7 GKEAKAVTLVYWDIKEFPVPPGFDARRVRPCINQLLETH-GYSGPITIYAVGILTDVHVD 65

Query: 398 LLEKISSSGIILTHSPCVGKGLMLFMDDWFGDDFSNPHPPGYVM 529
           +L  +SS+GIIL +SP     +M  M  W      N  PP  ++
Sbjct:  66 ILRALSSTGIILCYSPFGKTDIMSLMFKW----MCNNSPPANLL 105

>gi|297810119|ref|XP_002872943.1| predicted protein [Arabidopsis lyrata subsp.
        lyrata]

          Length = 220

 Score =  73 bits (177), Expect = 4e-011
 Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 4/92 (4%)
 Frame = +2

Query: 239 TGVWWDLNTCPLPAGFDPRWVRPCIESAVEEEIGFRTEVTIYAMGNLEYISIDLLEKISS 418
           T V+WD+N  P+P GFD R VRPCI   +E   G+    TIYA+G L  +  D+L+ + S
Sbjct:  37 TSVFWDINMFPVPPGFDARLVRPCISRLLESH-GYSAPPTIYAVGKLTDVHDDILQTLFS 95

Query: 419 SGIILTHSPCVGKGLMLFMDDWFGDDFSNPHP 514
           +GI L ++P     ++L M  W     +NP P
Sbjct:  96 TGITLYYAPHGSADMVLLMSQWIS---TNPPP 124

>gi|297842948|ref|XP_002889355.1| hypothetical protein ARALYDRAFT_887275
        [Arabidopsis lyrata subsp. lyrata]

          Length = 94

 Score =  69 bits (168), Expect = 4e-010
 Identities = 34/79 (43%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
 Frame = +2

Query: 209 GGGGGDVSK--KTGVWWDLNTCPLPAGFDPRWVRPCIESAVEEEIGFRTEVTIYAMGNLE 382
           GGGG + +K  K  VWWD+  CP+P GFD R VRP +E+A  +++G+   V+I A G+  
Sbjct:   8 GGGGEEAAKAAKIAVWWDMVECPIPEGFDARRVRPSLEAAF-KKLGYSGPVSITAYGDQT 66

Query: 383 YISIDLLEKISSSGIILTH 439
           + S+DLL  +SS+ +  T+
Sbjct:  67 HTSVDLLRCLSSTSLCCTY 85

>gi|297848378|ref|XP_002892070.1| hypothetical protein ARALYDRAFT_887319
        [Arabidopsis lyrata subsp. lyrata]

          Length = 175

 Score =  69 bits (166), Expect = 7e-010
 Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
 Frame = +2

Query: 200 KAGGGGGGDVSKKTGVWWDLNTCPLPAGFDPRWVRPCIESAVEEEIGFRTEVTIYAMGNL 379
           KA   G  +    T VWWD+N CP+P+  D R V PCI+ A+ E++G+   +TI A G L
Sbjct:   2 KAKAVGEAEAKAVTRVWWDINRCPVPSDVDVRRVGPCIKRAL-EKLGYSGPLTITAGGIL 60

Query: 380 EYISIDLLEKISSSGIILTHSPCVGK 457
             +  D L ++ SSGI L H P V +
Sbjct:  61 TDVPHDFLRQVHSSGIALHHVPTVSE 86

>gi|297817724|ref|XP_002876745.1| hypothetical protein ARALYDRAFT_904327
        [Arabidopsis lyrata subsp. lyrata]

          Length = 589

 Score =  68 bits (165), Expect = 1e-009
 Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
 Frame = +2

Query: 227 VSKKTGVWWDLNTCPLPAGFDPRWVRPCIESAVEEEIGFRTEVTIYAMGNLEYISIDLLE 406
           V  KT VWWD+  CPLP  +D   V PCI+ A+ + +G+   ++I A+GNL++    +L 
Sbjct: 115 VKSKTTVWWDIERCPLPHVYDASLVGPCIDRAL-QYLGYLGPISITAIGNLKHTPDHVLR 173

Query: 407 KISSSGIILTHSPCVGKGLMLFMDDWFGDDFSNPHPPGYVMIISGDQKMLD 559
            +SSSGI++ H P     +   +  W         PP   M+IS      D
Sbjct: 174 ALSSSGILVKHVPNGTSSIFAQLFAW----KLQSRPPATFMLISDSPVRFD 220

>gi|224124918|ref|XP_002319457.1| predicted protein [Populus trichocarpa]

          Length = 165

 Score =  67 bits (161), Expect = 3e-009
 Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
 Frame = +2

Query: 215 GGGDVSKKTGVWWDLNTCPLPAGFDPRWVRPCIESAVEEEIGFRTEVTIYAMGNLEYISI 394
           G   V+ KT VWWD+  C +P G DP  +   I SA+  E+ +R  V+I A G+   I+ 
Sbjct:   2 GAQYVNAKTSVWWDIENCAVPRGCDPHAIAQNISSAL-VEMNYRGPVSISAYGDTHGINS 60

Query: 395 DLLEKISSSGIILTHSPCVG------KGLMLFMDDWFGDDFSNPHPPGYVMIISGDQ 547
              + +SS+GI L H P  G      K +++ M  W  D   NP P  Y ++ISGD+
Sbjct:  61 TAQQALSSTGIALNHVPASGVKDASDKKILVDMLFWAVD---NPAPANY-LLISGDR 113

>gi|224124930|ref|XP_002319460.1| predicted protein [Populus trichocarpa]

          Length = 172

 Score =  66 bits (159), Expect = 5e-009
 Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
 Frame = +2

Query: 206 GGGGGGD---VSKKTGVWWDLNTCPLPAGFDPRWVRPCIESAVEEEIGFRTEVTIYAMGN 376
           GGGGG D   VS KT VWWD+  C +P G DP  +   I SA+  ++ +R  V+I A G+
Sbjct:   2 GGGGGADAQYVSAKTSVWWDIENCAVPRGCDPHAIAQNISSAL-VQMNYRGPVSISAYGD 60

Query: 377 LEYISIDLLEKISSSGIILTHSP 445
              I     + +SS+GI+L H P
Sbjct:  61 THGIHSTAQQALSSTGIVLNHVP 83

>gi|297820316|ref|XP_002878041.1| hypothetical protein ARALYDRAFT_906985
        [Arabidopsis lyrata subsp. lyrata]

          Length = 143

 Score =  66 bits (159), Expect = 5e-009
 Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
 Frame = +2

Query: 224 DVSKKTGVWWDLNTCPLPAGFDPRWVRPCIESAVEEEIGFRTEVTIYAMGNLEYISIDLL 403
           D   KT VWWD++  P+P+G+D   +R CIE  +  ++G+   VTI A G+L     ++L
Sbjct:  12 DAEAKTSVWWDMDHFPVPSGYDAGRIRECIERRL-GKLGYCGPVTISACGDLRKTEENIL 70

Query: 404 EKISSSGIILTHSPC 448
             +SS+GIIL HS C
Sbjct:  71 RALSSTGIILNHSYC 85

>gi|42568141|ref|NP_198414.2| Putative endonuclease or glycosyl hydrolase
        [Arabidopsis thaliana]

          Length = 192

 Score =  65 bits (156), Expect = 1e-008
 Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
 Frame = +2

Query: 239 TGVWWDLNTCPLPAGFDPRWVRPCIESAVEEEIGFRTEVTIYAMGNLEYISIDLLEKISS 418
           T VWWD+N CPLP   D R V P I+ A+ E++G+   +T  A+G L  +  D L ++ S
Sbjct:  34 TSVWWDINRCPLPNDVDVRRVSPFIKRAL-EKLGYTGALTTTAIGILTDVPHDFLTQVYS 92

Query: 419 SGIILTHSPCVGKGLMLFMDD----WFGDDFSNPHPPGYVMIISGD 544
           SGI + H P V +  +  +      W  D+     PP  +M+IS +
Sbjct:  93 SGIAIHHIPLVSETDIFELSSAVIYWTWDNL----PPSNIMLISNE 134

>gi|15229336|ref|NP_191844.1| zinc finger protein-like protein [Arabidopsis
        thaliana]

          Length = 472

 Score =  63 bits (151), Expect = 4e-008
 Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
 Frame = +2

Query: 245 VWWDLNTCPLPAGFDPRWVRPCIESAVEEEIGFRTEVTIYAMGNLEYISIDLLEKISSSG 424
           VWWD+  CP+P G+D R VRP +E A  +++G+   V+I   G+       +L ++SS+G
Sbjct: 242 VWWDMKDCPIPEGYDARQVRPSLEGAF-KKLGYSGPVSITGCGDHNKTPDHILRELSSTG 300

Query: 425 IILTHS--PCVGKGLMLFMDDWFGDDFSNPHPPGYVMIISGDQKML 556
           + L HS    +   + + M  W      NP PP  +M+IS    M+
Sbjct: 301 VDLAHSIDEVIYSRMFINMKQW---KARNP-PPATIMLISDGVVMM 342


 Score =  60 bits (143), Expect = 3e-007
 Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 12/128 (9%)
 Frame = +2

Query: 236 KTGVWWDLNTCPLPAGFDPRWVRPCIESAVEEEIGFRTEVTIYAMGNLEYISIDLLEKIS 415
           K  VWWD+  CP+P G+D R VRP IE+A   E+G+   ++I   G+       +L  +S
Sbjct:  15 KIAVWWDMKDCPIPEGYDARLVRPSIEAAF-NELGYSGPISITGYGDQRETPCQILRGLS 73

Query: 416 SSGI----ILTHSPCVGKGLMLFMDDWFGDDFSNPHPPGYVMIISGDQKMLDPWRF-RSF 580
           S+G+    I+  S C    +   M +W      NP PP  +M++S   + +  W   R  
Sbjct:  74 STGVAVAQIIPESRC--SLMYSSMLEWRD---LNP-PPATMMLVSDQWQHVFAWDLSRLQ 127

Query: 581 GHTTFVAF 604
            HT +  F
Sbjct: 128 QHTKYNLF 135

>gi|225437724|ref|XP_002273252.1| PREDICTED: hypothetical protein [Vitis
        vinifera]

          Length = 652

 Score =  62 bits (148), Expect = 9e-008
 Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 10/112 (8%)
 Frame = +2

Query: 227 VSKKTGVWWDLNTCPLPAGFDPRWVRPCIESAVEEEIGFRTEVTIYAMGNLEYISIDLLE 406
           VS KT VWWD+  C +P G DP  +   I SA+  ++ +   V+I A G+   I   + +
Sbjct:  22 VSVKTSVWWDIENCQVPKGCDPHAIAQNISSAL-AKLYYSGPVSISAYGDTNRIPASVQQ 80

Query: 407 KISSSGIILTHSP-----CVGKGLMLFMDDWFGDDFSNPHPPGYVMIISGDQ 547
            +SS+GI L H P        K +++ M  W  D   NP P  Y ++ISGD+
Sbjct:  81 ALSSTGIALNHVPAGVKDASDKKILVDMLFWAVD---NPAPANY-LLISGDR 128

>gi|297744055|emb|CBI37025.3| unnamed protein product [Vitis vinifera]

          Length = 529

 Score =  62 bits (148), Expect = 9e-008
 Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 10/112 (8%)
 Frame = +2

Query: 227 VSKKTGVWWDLNTCPLPAGFDPRWVRPCIESAVEEEIGFRTEVTIYAMGNLEYISIDLLE 406
           VS KT VWWD+  C +P G DP  +   I SA+  ++ +   V+I A G+   I   + +
Sbjct:  22 VSVKTSVWWDIENCQVPKGCDPHAIAQNISSAL-AKLYYSGPVSISAYGDTNRIPASVQQ 80

Query: 407 KISSSGIILTHSP-----CVGKGLMLFMDDWFGDDFSNPHPPGYVMIISGDQ 547
            +SS+GI L H P        K +++ M  W  D   NP P  Y ++ISGD+
Sbjct:  81 ALSSTGIALNHVPAGVKDASDKKILVDMLFWAVD---NPAPANY-LLISGDR 128

>gi|297790772|ref|XP_002863271.1| predicted protein [Arabidopsis lyrata subsp.
        lyrata]

          Length = 233

 Score =  61 bits (147), Expect = 1e-007
 Identities = 39/108 (36%), Positives = 59/108 (54%), Gaps = 10/108 (9%)
 Frame = +2

Query: 239 TGVWWDLNTCPLPAGFDPRWVRPCIESAVEEEIGFRTEVTIYAMGNLEYISIDLLEKISS 418
           T V+WDLNTCPLP G+D   V PCIE A+  ++G+   V I  +G L  +S  +L+ + S
Sbjct:   9 TRVFWDLNTCPLPYGYDGGRVGPCIERAL-RKLGYSGRVFITGIGILTDVSTGVLQAVYS 67

Query: 419 SGIIL--THSPCVGKGLMLFMDDWFGDDFSNPHPPGYVMIISGDQKML 556
           SG+ L    + C G  + +          S P P   +M+ISG++  +
Sbjct:  68 SGVSLCNVRTKCFGVEMKITC------SLSKP-PRDNLMLISGERSFV 108

>gi|255548285|ref|XP_002515199.1| hypothetical protein RCOM_1343910 [Ricinus
        communis]

          Length = 627

 Score =  60 bits (145), Expect = 2e-007
 Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 10/112 (8%)
 Frame = +2

Query: 227 VSKKTGVWWDLNTCPLPAGFDPRWVRPCIESAVEEEIGFRTEVTIYAMGNLEYISIDLLE 406
           VS KT VWWD+  C +P G DP  +   I SA+  ++ +   V+I A G+   I   +  
Sbjct:  24 VSAKTSVWWDIENCQVPKGCDPHAIAQNISSAL-VKLNYCGAVSISAYGDTNRIPQSVQH 82

Query: 407 KISSSGIILTHSP-----CVGKGLMLFMDDWFGDDFSNPHPPGYVMIISGDQ 547
            +SS+GI L H P        K +++ M  W  D   NP P  Y ++ISGD+
Sbjct:  83 ALSSTGIALNHVPAGVKDASDKKILVDMLFWAVD---NPAPANY-LLISGDR 130

>gi|9758689|dbj|BAB09305.1| unnamed protein product [Arabidopsis thaliana]

          Length = 230

 Score =  59 bits (142), Expect = 4e-007
 Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
 Frame = +2

Query: 239 TGVWWDLNTCPLPAGFDPRWVRPCIESAVEEEIGFRTEVTIYAMGNLEYISIDLLEKISS 418
           T VWWD+N CPLP   D R V P I+ A+ E++G+   +T  A+G L  +  D L ++ S
Sbjct:  34 TSVWWDINRCPLPNDVDVRRVSPFIKRAL-EKLGYTGALTTTAIGILTDVPHDFLTQVYS 92

Query: 419 SGIILTHSP 445
           SGI + H P
Sbjct:  93 SGIAIHHIP 101

>gi|9294534|dbj|BAB02797.1| unnamed protein product [Arabidopsis thaliana]

          Length = 345

 Score =  58 bits (139), Expect = 1e-006
 Identities = 39/112 (34%), Positives = 62/112 (55%), Gaps = 13/112 (11%)
 Frame = +2

Query: 233 KKTGVWWDLNTCPLPAGFDPRWVRPCIESAVEEEIGFRTE---VTIYAMGNLEYI--SID 397
           +KT V W++ TCPLP G DPR V P IESA+E+   +R     + I A+GNL  I    +
Sbjct:   6 EKTLVLWNMTTCPLPDGHDPRLVGPRIESALEKSGQWRCRRGPLFITAVGNLTQIPGGDE 65

Query: 398 LLEKISSSGIILTHSPCVGKGLMLFMDDWFGDDFSNPHPPGYVMIISGDQKM 553
            L  +SS+GI L H+  + + L     +W  ++ +    P  +M+I+  + +
Sbjct:  66 SLRTLSSTGIALKHAHDIQRDLF----EWTDENLA----PATIMLITSSKDL 109

>gi|297821196|ref|XP_002878481.1| predicted protein [Arabidopsis lyrata subsp.
        lyrata]

          Length = 484

 Score =  57 bits (137), Expect = 2e-006
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
 Frame = +2

Query: 200 KAGGGGGGDVSKKTGVWWDLNTCPLPAGFDPRWVRPCIESAVEEEIGFRTEVTIYAMGNL 379
           K G       + K  VWWD+  CP+P G+D R VRP IE+A   E+G+   V+I   G+ 
Sbjct:   3 KRGAAKPEYATAKIAVWWDMKCCPIPEGYDARLVRPSIEAAF-NELGYSGPVSITGYGDQ 61

Query: 380 EYISIDLLEKISSSGI 427
                 +L  +SS+G+
Sbjct:  62 RQTPCHILRGLSSTGV 77

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,873,197,794,269
Number of Sequences: 15229318
Number of Extensions: 2873197794269
Number of Successful Extensions: 688350487
Number of sequences better than 0.0: 0