BLASTX 7.6.2
Query= UN24217 /QuerySize=1352
(1351 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297803572|ref|XP_002869670.1| hypothetical protein ARALYDRAFT... 624 2e-176
gi|15235112|ref|NP_194280.1| arginine/serine-rich-splicing facto... 619 6e-175
gi|1667582|gb|AAB18813.1| splicing factor At-SRp40 [Arabidopsis ... 615 6e-174
gi|7269400|emb|CAB81360.1| splicing factor At-SRp40 [Arabidopsis... 615 6e-174
gi|145334133|ref|NP_001078447.1| arginine/serine-rich-splicing f... 547 2e-153
gi|222424234|dbj|BAH20075.1| AT4G25500 [Arabidopsis thaliana] 546 5e-153
gi|42573039|ref|NP_974616.1| arginine/serine-rich-splicing facto... 531 2e-148
gi|30696140|ref|NP_200017.2| arginine/serine-rich-splicing facto... 491 1e-136
gi|30696138|ref|NP_851174.1| arginine/serine-rich-splicing facto... 488 9e-136
gi|1707370|emb|CAA67799.1| splicing factor [Arabidopsis thaliana] 487 2e-135
gi|297792527|ref|XP_002864148.1| hypothetical protein ARALYDRAFT... 483 4e-134
gi|238481546|ref|NP_001154774.1| arginine/serine-rich-splicing f... 420 4e-115
gi|227206136|dbj|BAH57123.1| AT5G52040 [Arabidopsis thaliana] 417 2e-114
gi|238481544|ref|NP_001154773.1| arginine/serine-rich-splicing f... 417 2e-114
gi|224120150|ref|XP_002318257.1| predicted protein [Populus tric... 394 2e-107
gi|224136870|ref|XP_002322436.1| predicted protein [Populus tric... 391 2e-106
gi|41323931|gb|AAS00039.1| splicing factor-like protein [Vitis r... 365 1e-098
gi|147863191|emb|CAN82624.1| hypothetical protein VITISV_021436 ... 365 1e-098
gi|255539555|ref|XP_002510842.1| arginine/serine-rich splicing f... 327 4e-087
>gi|297803572|ref|XP_002869670.1| hypothetical protein ARALYDRAFT_492278
[Arabidopsis lyrata subsp. lyrata]
Length = 348
Score = 624 bits (1607), Expect = 2e-176
Identities = 314/353 (88%), Positives = 331/353 (93%), Gaps = 9/353 (2%)
Frame = +3
Query: 96 MKPVFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEF 275
MKPVFCGNFEYDAREGDLERLFRKYG+VERVDMKAGFAFVYMEDERDAEDAIRALDRIEF
Sbjct: 1 MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRIEF 60
Query: 276 GRKGRRLRVEWTKGERGGDRRSGGGGGGSRRSSS-LRPSKTLFVINFDADNTRTRGLERH 452
GRKGRRLRVEWTK ER GDRRS GGGSRRSSS +RPSKTLFVINFDADNTRTR LERH
Sbjct: 61 GRKGRRLRVEWTKSEREGDRRS---GGGSRRSSSGMRPSKTLFVINFDADNTRTRDLERH 117
Query: 453 FEPYGKIVNVRIRRNFAFIQYEEQEDATRALDATNNSKLMDKVISVEYAMKDDDARGNGH 632
FEPYGKI+NVRIRRNFAFIQYE QEDATRALDATNNSKLMDKVISVEYA+KDDDARGNGH
Sbjct: 118 FEPYGKILNVRIRRNFAFIQYEAQEDATRALDATNNSKLMDKVISVEYAVKDDDARGNGH 177
Query: 633 SPERRRDRSPERRRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRT 812
SPERRRDRSPERRRRSPSPYKRERGSPDYGRG SPVAAY+++RTSPDYGRRRSPSPYK++
Sbjct: 178 SPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKDRTSPDYGRRRSPSPYKKS 237
Query: 813 RRSSPEYGRDHRHRGNESPRRRERAASPRYSRSPDNKRERVSPDRSPFKKEGLKNGDGEV 992
R SPEYGRD RGN+SPRRRER ASP+YSRSP+NKRER+SP+ SPFKKE +NG GEV
Sbjct: 238 RCGSPEYGRD--RRGNDSPRRRERVASPKYSRSPNNKRERMSPNHSPFKKESPRNGVGEV 295
Query: 993 DSP--RRERSRSSPENGQVESPGSIGRRDSDGGYDGADSPPMQKSRSRSPPAE 1145
DSP RRERSRSSPENGQVESPGSIGRRDSDGGYDGA+S PMQKSRSRSPPA+
Sbjct: 296 DSPIVRRERSRSSPENGQVESPGSIGRRDSDGGYDGAES-PMQKSRSRSPPAD 347
>gi|15235112|ref|NP_194280.1| arginine/serine-rich-splicing factor RSP40
[Arabidopsis thaliana]
Length = 350
Score = 619 bits (1594), Expect = 6e-175
Identities = 312/355 (87%), Positives = 331/355 (93%), Gaps = 9/355 (2%)
Frame = +3
Query: 96 MKPVFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEF 275
MKPVFCGNFEYDAREGDLERLFRKYG+VERVDMKAGFAFVYMEDERDAEDAIRALDR EF
Sbjct: 1 MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60
Query: 276 GRKGRRLRVEWTKGERGGDRRSGGGGGGSRRSSSLRPSKTLFVINFDADNTRTRGLERHF 455
GRKGRRLRVEWTK ERGGD+RS GGG R SSS+RPSKTLFVINFDADNTRTR LE+HF
Sbjct: 61 GRKGRRLRVEWTKSERGGDKRS--GGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHF 118
Query: 456 EPYGKIVNVRIRRNFAFIQYEEQEDATRALDATNNSKLMDKVISVEYAMKDDDARGNGHS 635
EPYGKIVNVRIRRNFAFIQYE QEDATRALDA+NNSKLMDKVISVEYA+KDDDARGNGHS
Sbjct: 119 EPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHS 178
Query: 636 PERRRDRSPERRRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTR 815
PERRRDRSPERRRRSPSPYKRERGSPDYGRG SPVAAY++ERTSPDYGRRRSPSPYK++R
Sbjct: 179 PERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSR 238
Query: 816 RSSPEYGRDHRHRGNESPRRRERAASP-RYSRSPDNKRERVSPDRSPFKKEGLKNGDGEV 992
R SPEYGRD RGN+SPRRRER ASP +YSRSP+NKRER+SP+ SPFKKE +NG GEV
Sbjct: 239 RGSPEYGRD--RRGNDSPRRRERVASPTKYSRSPNNKRERMSPNHSPFKKESPRNGVGEV 296
Query: 993 DSP--RRERSRSSPENGQVESPGSIGRRDSDGGYDGADSPPMQKSRS-RSPPAEE 1148
+SP RRERSRSSPENGQVESPGSIGRRDSDGGYDGA+S PMQKSRS RSPPA+E
Sbjct: 297 ESPIERRERSRSSPENGQVESPGSIGRRDSDGGYDGAES-PMQKSRSPRSPPADE 350
>gi|1667582|gb|AAB18813.1| splicing factor At-SRp40 [Arabidopsis thaliana]
Length = 350
Score = 615 bits (1585), Expect = 6e-174
Identities = 310/355 (87%), Positives = 330/355 (92%), Gaps = 9/355 (2%)
Frame = +3
Query: 96 MKPVFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEF 275
MKPVFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDR EF
Sbjct: 1 MKPVFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60
Query: 276 GRKGRRLRVEWTKGERGGDRRSGGGGGGSRRSSSLRPSKTLFVINFDADNTRTRGLERHF 455
GR+GR LRVEWTK ERGGD+RS GGG R SSS+RPSKTLFVINFDADNTRTR LE+HF
Sbjct: 61 GRRGRTLRVEWTKSERGGDKRS--GGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHF 118
Query: 456 EPYGKIVNVRIRRNFAFIQYEEQEDATRALDATNNSKLMDKVISVEYAMKDDDARGNGHS 635
EPYGKIVNVRIRRNFAFIQYE QEDATRALDA+NNSKLMDKVISVEYA+KDDDARGNGHS
Sbjct: 119 EPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHS 178
Query: 636 PERRRDRSPERRRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTR 815
PERRRDRSPERRRRSP+PYKRERGSPDYGRG SPVAAY++ERTSPDYGRRRSPSPYK++R
Sbjct: 179 PERRRDRSPERRRRSPTPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSR 238
Query: 816 RSSPEYGRDHRHRGNESPRRRERAASP-RYSRSPDNKRERVSPDRSPFKKEGLKNGDGEV 992
R SPEYGRD RGN+SPRRRER ASP +YSRSP+NKRER+SP+ SPFKKE +NG GEV
Sbjct: 239 RGSPEYGRD--RRGNDSPRRRERVASPTKYSRSPNNKRERMSPNHSPFKKESPRNGVGEV 296
Query: 993 DSP--RRERSRSSPENGQVESPGSIGRRDSDGGYDGADSPPMQKSRS-RSPPAEE 1148
+SP RRERSRSSPENGQVESPGSIGRRDSDGGYDGA+S PMQKSRS RSPPA+E
Sbjct: 297 ESPIERRERSRSSPENGQVESPGSIGRRDSDGGYDGAES-PMQKSRSPRSPPADE 350
>gi|7269400|emb|CAB81360.1| splicing factor At-SRp40 [Arabidopsis thaliana]
Length = 349
Score = 615 bits (1585), Expect = 6e-174
Identities = 310/354 (87%), Positives = 329/354 (92%), Gaps = 9/354 (2%)
Frame = +3
Query: 99 KPVFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEFG 278
KPVFCGNFEYDAREGDLERLFRKYG+VERVDMKAGFAFVYMEDERDAEDAIRALDR EFG
Sbjct: 1 KPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEFG 60
Query: 279 RKGRRLRVEWTKGERGGDRRSGGGGGGSRRSSSLRPSKTLFVINFDADNTRTRGLERHFE 458
RKGRRLRVEWTKGERGGD+RS GGG R SSS+RPSKTLFVINFDADNTRTR LE+HFE
Sbjct: 61 RKGRRLRVEWTKGERGGDKRS--GGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHFE 118
Query: 459 PYGKIVNVRIRRNFAFIQYEEQEDATRALDATNNSKLMDKVISVEYAMKDDDARGNGHSP 638
PYGKIVNVRIRRNFAFIQYE QEDATRALDA+NN KLMDKVISVEYA+KDDDARGNGHSP
Sbjct: 119 PYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNRKLMDKVISVEYAVKDDDARGNGHSP 178
Query: 639 ERRRDRSPERRRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRR 818
ERRRDRSPERRRRSPSPYKRERGSPDYGRG SPVAAY++ERTSPDYGRRRSPSPYK++RR
Sbjct: 179 ERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSRR 238
Query: 819 SSPEYGRDHRHRGNESPRRRERAASP-RYSRSPDNKRERVSPDRSPFKKEGLKNGDGEVD 995
SPEYGRD RGN+SPRRRER ASP +YSRSP+NKRER+SP+ SPFKKE +NG GEV+
Sbjct: 239 GSPEYGRD--RRGNDSPRRRERVASPTKYSRSPNNKRERMSPNHSPFKKESPRNGVGEVE 296
Query: 996 SP--RRERSRSSPENGQVESPGSIGRRDSDGGYDGADSPPMQKSRS-RSPPAEE 1148
SP RRERSRSSPENGQVESPGSIGRRDSDGGYDGA+S PMQK RS RSPPA+E
Sbjct: 297 SPIERRERSRSSPENGQVESPGSIGRRDSDGGYDGAES-PMQKRRSPRSPPADE 349
>gi|145334133|ref|NP_001078447.1| arginine/serine-rich-splicing factor RSP40
[Arabidopsis thaliana]
Length = 317
Score = 547 bits (1409), Expect = 2e-153
Identities = 278/320 (86%), Positives = 296/320 (92%), Gaps = 9/320 (2%)
Frame = +3
Query: 201 GFAFVYMEDERDAEDAIRALDRIEFGRKGRRLRVEWTKGERGGDRRSGGGGGGSRRSSSL 380
GFAFVYMEDERDAEDAIRALDR EFGRKGRRLRVEWTK ERGGD+RS GGG R SSS+
Sbjct: 3 GFAFVYMEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSERGGDKRS--GGGSRRSSSSM 60
Query: 381 RPSKTLFVINFDADNTRTRGLERHFEPYGKIVNVRIRRNFAFIQYEEQEDATRALDATNN 560
RPSKTLFVINFDADNTRTR LE+HFEPYGKIVNVRIRRNFAFIQYE QEDATRALDA+NN
Sbjct: 61 RPSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNN 120
Query: 561 SKLMDKVISVEYAMKDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGGSPV 740
SKLMDKVISVEYA+KDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRG SPV
Sbjct: 121 SKLMDKVISVEYAVKDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPV 180
Query: 741 AAYKRERTSPDYGRRRSPSPYKRTRRSSPEYGRDHRHRGNESPRRRERAASP-RYSRSPD 917
AAY++ERTSPDYGRRRSPSPYK++RR SPEYGRD RGN+SPRRRER ASP +YSRSP+
Sbjct: 181 AAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRD--RRGNDSPRRRERVASPTKYSRSPN 238
Query: 918 NKRERVSPDRSPFKKEGLKNGDGEVDSP--RRERSRSSPENGQVESPGSIGRRDSDGGYD 1091
NKRER+SP+ SPFKKE +NG GEV+SP RRERSRSSPENGQVESPGSIGRRDSDGGYD
Sbjct: 239 NKRERMSPNHSPFKKESPRNGVGEVESPIERRERSRSSPENGQVESPGSIGRRDSDGGYD 298
Query: 1092 GADSPPMQKSRS-RSPPAEE 1148
GA+S PMQKSRS RSPPA+E
Sbjct: 299 GAES-PMQKSRSPRSPPADE 317
>gi|222424234|dbj|BAH20075.1| AT4G25500 [Arabidopsis thaliana]
Length = 317
Score = 546 bits (1405), Expect = 5e-153
Identities = 277/320 (86%), Positives = 296/320 (92%), Gaps = 9/320 (2%)
Frame = +3
Query: 201 GFAFVYMEDERDAEDAIRALDRIEFGRKGRRLRVEWTKGERGGDRRSGGGGGGSRRSSSL 380
GFAFVYMEDERDAEDAIRALDR EFGRKGRRLRVEWTK ERGGD+RS GGG R SSS+
Sbjct: 3 GFAFVYMEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSERGGDKRS--GGGSRRSSSSM 60
Query: 381 RPSKTLFVINFDADNTRTRGLERHFEPYGKIVNVRIRRNFAFIQYEEQEDATRALDATNN 560
RPSKTLFVINFDADNTRTR LE+HFEPYGKIVNVRIRRNFAFIQY+ QEDATRALDA+NN
Sbjct: 61 RPSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYKAQEDATRALDASNN 120
Query: 561 SKLMDKVISVEYAMKDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGGSPV 740
SKLMDKVISVEYA+KDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRG SPV
Sbjct: 121 SKLMDKVISVEYAVKDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPV 180
Query: 741 AAYKRERTSPDYGRRRSPSPYKRTRRSSPEYGRDHRHRGNESPRRRERAASP-RYSRSPD 917
AAY++ERTSPDYGRRRSPSPYK++RR SPEYGRD RGN+SPRRRER ASP +YSRSP+
Sbjct: 181 AAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRD--RRGNDSPRRRERVASPTKYSRSPN 238
Query: 918 NKRERVSPDRSPFKKEGLKNGDGEVDSP--RRERSRSSPENGQVESPGSIGRRDSDGGYD 1091
NKRER+SP+ SPFKKE +NG GEV+SP RRERSRSSPENGQVESPGSIGRRDSDGGYD
Sbjct: 239 NKRERMSPNHSPFKKESPRNGVGEVESPIERRERSRSSPENGQVESPGSIGRRDSDGGYD 298
Query: 1092 GADSPPMQKSRS-RSPPAEE 1148
GA+S PMQKSRS RSPPA+E
Sbjct: 299 GAES-PMQKSRSPRSPPADE 317
>gi|42573039|ref|NP_974616.1| arginine/serine-rich-splicing factor RSP40
[Arabidopsis thaliana]
Length = 309
Score = 531 bits (1366), Expect = 2e-148
Identities = 270/312 (86%), Positives = 288/312 (92%), Gaps = 9/312 (2%)
Frame = +3
Query: 225 DERDAEDAIRALDRIEFGRKGRRLRVEWTKGERGGDRRSGGGGGGSRRSSSLRPSKTLFV 404
DERDAEDAIRALDR EFGRKGRRLRVEWTK ERGGD+RS GGG R SSS+RPSKTLFV
Sbjct: 3 DERDAEDAIRALDRFEFGRKGRRLRVEWTKSERGGDKRS--GGGSRRSSSSMRPSKTLFV 60
Query: 405 INFDADNTRTRGLERHFEPYGKIVNVRIRRNFAFIQYEEQEDATRALDATNNSKLMDKVI 584
INFDADNTRTR LE+HFEPYGKIVNVRIRRNFAFIQYE QEDATRALDA+NNSKLMDKVI
Sbjct: 61 INFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVI 120
Query: 585 SVEYAMKDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGGSPVAAYKRERT 764
SVEYA+KDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRG SPVAAY++ERT
Sbjct: 121 SVEYAVKDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERT 180
Query: 765 SPDYGRRRSPSPYKRTRRSSPEYGRDHRHRGNESPRRRERAASP-RYSRSPDNKRERVSP 941
SPDYGRRRSPSPYK++RR SPEYGRD RGN+SPRRRER ASP +YSRSP+NKRER+SP
Sbjct: 181 SPDYGRRRSPSPYKKSRRGSPEYGRD--RRGNDSPRRRERVASPTKYSRSPNNKRERMSP 238
Query: 942 DRSPFKKEGLKNGDGEVDSP--RRERSRSSPENGQVESPGSIGRRDSDGGYDGADSPPMQ 1115
+ SPFKKE +NG GEV+SP RRERSRSSPENGQVESPGSIGRRDSDGGYDGA+S PMQ
Sbjct: 239 NHSPFKKESPRNGVGEVESPIERRERSRSSPENGQVESPGSIGRRDSDGGYDGAES-PMQ 297
Query: 1116 KSRS-RSPPAEE 1148
KSRS RSPPA+E
Sbjct: 298 KSRSPRSPPADE 309
>gi|30696140|ref|NP_200017.2| arginine/serine-rich-splicing factor RSP41
[Arabidopsis thaliana]
Length = 357
Score = 491 bits (1263), Expect = 1e-136
Identities = 268/365 (73%), Positives = 289/365 (79%), Gaps = 22/365 (6%)
Frame = +3
Query: 96 MKPVFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEF 275
MKPVFCGNFEYDARE DLERLFRKYG+VERVDMKAGFAFVYMEDERDAEDAIRALDR E+
Sbjct: 1 MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60
Query: 276 GRKGRRLRVEWTKGERGGDRRSGGGGGGSRRSSS-LRPSKTLFVINFDADNTRTRGLERH 452
GR GRRLRVEWTK +RGG RS GGSRRSSS LRPSKTLFVINFDA NTRTR LERH
Sbjct: 61 GRTGRRLRVEWTKNDRGGAGRS----GGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERH 116
Query: 453 FEPYGKIVNVRIRRNFAFIQYEEQEDATRALDATNNSKLMDKVISVEYAMKDDDARGNGH 632
FEPYGKIVNVRIRRNFAFIQYE QEDATRALDATN+SKLMDKVISVEYA+KDDD+RGNG+
Sbjct: 117 FEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGY 176
Query: 633 SPERRRDRSPERRRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGR-RRSPSPYKR 809
SPERRRDRSP+RRRRSPSPY+RERGSPDYGRG SPV A+KRERTSPDYGR RRSPSPYKR
Sbjct: 177 SPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPV-AHKRERTSPDYGRGRRSPSPYKR 235
Query: 810 TRRSSPEYGRDHRHR------GNESPRRRERAASPRYSRSP---DNKRERVSPDRSPFKK 962
R SP+Y RD R R N + R R SRSP + +RE SP P++K
Sbjct: 236 A-RLSPDYKRDDRRRERVASPENGAVRNRSPRKGRGESRSPPPYEKRRESRSP--PPYEK 292
Query: 963 EGLKNGDGEVDSPR---RERSRSSPENGQVESPGSIGRRDSDGGYDGADSPPMQKSRSRS 1133
+ R R RS+SSPENGQVESPG I ++ GYDGADSP + S SRS
Sbjct: 293 RRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQIMEVEAGRGYDGADSPIRESSPSRS 352
Query: 1134 PPAEE 1148
PPAEE
Sbjct: 353 PPAEE 357
>gi|30696138|ref|NP_851174.1| arginine/serine-rich-splicing factor RSP41
[Arabidopsis thaliana]
Length = 356
Score = 488 bits (1256), Expect = 9e-136
Identities = 268/365 (73%), Positives = 291/365 (79%), Gaps = 23/365 (6%)
Frame = +3
Query: 96 MKPVFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEF 275
MKPVFCGNFEYDARE DLERLFRKYG+VERVDMKAGFAFVYMEDERDAEDAIRALDR E+
Sbjct: 1 MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60
Query: 276 GRKGRRLRVEWTKGERGGDRRSGGGGGGSRRSSS-LRPSKTLFVINFDADNTRTRGLERH 452
GR GRRLRVEWTK +RGG RS GGSRRSSS LRPSKTLFVINFDA NTRTR LERH
Sbjct: 61 GRTGRRLRVEWTKNDRGGAGRS----GGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERH 116
Query: 453 FEPYGKIVNVRIRRNFAFIQYEEQEDATRALDATNNSKLMDKVISVEYAMKDDDARGNGH 632
FEPYGKIVNVRIRRNFAFIQYE QEDATRALDATN+SKLMDKVISVEYA+KDDD+RGNG+
Sbjct: 117 FEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGY 176
Query: 633 SPERRRDRSPERRRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGR-RRSPSPYKR 809
SPERRRDRSP+RRRRSPSPY+RERGSPDYGRG SPV A+KRERTSPDYGR RRSPSPYKR
Sbjct: 177 SPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPV-AHKRERTSPDYGRGRRSPSPYKR 235
Query: 810 TRRSSPEYGRDHRHR------GNESPRRRERAASPRYSRSP---DNKRERVSPDRSPFKK 962
R SP+Y RD R R N + R R SRSP + +RE SP P++K
Sbjct: 236 A-RLSPDYKRDDRRRERVASPENGAVRNRSPRKGRGESRSPPPYEKRRESRSP--PPYEK 292
Query: 963 EGLKNGDGEVDSPR---RERSRSSPENGQVESPGSIGRRDSDGGYDGADSPPMQKSRSRS 1133
+ R R RS+SSPENGQVESPG I ++ GYDGADS P+++S SRS
Sbjct: 293 RRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQIMEVEAGRGYDGADS-PIRESPSRS 351
Query: 1134 PPAEE 1148
PPAEE
Sbjct: 352 PPAEE 356
>gi|1707370|emb|CAA67799.1| splicing factor [Arabidopsis thaliana]
Length = 356
Score = 487 bits (1253), Expect = 2e-135
Identities = 267/365 (73%), Positives = 291/365 (79%), Gaps = 23/365 (6%)
Frame = +3
Query: 96 MKPVFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEF 275
MKPVFCGNFEYDARE DLERLFRKYG+VERVDMKAGFAFVYMEDERDAEDAIRALDR E+
Sbjct: 1 MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60
Query: 276 GRKGRRLRVEWTKGERGGDRRSGGGGGGSRRSSS-LRPSKTLFVINFDADNTRTRGLERH 452
GR GRRLRVEWTK +RGG RS GGSRRSSS LRPSKTLFVINFDA NTRTR LERH
Sbjct: 61 GRTGRRLRVEWTKNDRGGAGRS----GGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERH 116
Query: 453 FEPYGKIVNVRIRRNFAFIQYEEQEDATRALDATNNSKLMDKVISVEYAMKDDDARGNGH 632
FEPYGKIVNVRIRRN+AFIQYE QEDATRALDATN+SKLMDKVISVEYA+KDDD+RGNG+
Sbjct: 117 FEPYGKIVNVRIRRNYAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGY 176
Query: 633 SPERRRDRSPERRRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGR-RRSPSPYKR 809
SPERRRDRSP+RRRRSPSPY+RERGSPDYGRG SPV A+KRERTSPDYGR RRSPSPYKR
Sbjct: 177 SPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPV-AHKRERTSPDYGRGRRSPSPYKR 235
Query: 810 TRRSSPEYGRDHRHR------GNESPRRRERAASPRYSRSP---DNKRERVSPDRSPFKK 962
R SP+Y RD R R N + R R SRSP + +RE SP P++K
Sbjct: 236 A-RLSPDYKRDDRRRERVASPENGAVRNRSPRKGRGESRSPPPYEKRRESRSP--PPYEK 292
Query: 963 EGLKNGDGEVDSPR---RERSRSSPENGQVESPGSIGRRDSDGGYDGADSPPMQKSRSRS 1133
+ R R RS+SSPENGQVESPG I ++ GYDGADS P+++S SRS
Sbjct: 293 RRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQIMEVEAGRGYDGADS-PIRESPSRS 351
Query: 1134 PPAEE 1148
PPAEE
Sbjct: 352 PPAEE 356
>gi|297792527|ref|XP_002864148.1| hypothetical protein ARALYDRAFT_495275
[Arabidopsis lyrata subsp. lyrata]
Length = 357
Score = 483 bits (1242), Expect = 4e-134
Identities = 262/362 (72%), Positives = 286/362 (79%), Gaps = 22/362 (6%)
Frame = +3
Query: 105 VFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEFGRK 284
VFCGNFEYDARE DLERLF++YG+VERVDMKAGFAFVYMEDERDAEDAIRALDR E+GR
Sbjct: 4 VFCGNFEYDARESDLERLFKRYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEYGRT 63
Query: 285 GRRLRVEWTKGERGGDRRSGGGGGGSRRSSS-LRPSKTLFVINFDADNTRTRGLERHFEP 461
GRRLRVEWTK +RGG RS GGSRRSSS +RPSKTLFVINFDA NTRTR LERHFEP
Sbjct: 64 GRRLRVEWTKNDRGGAGRS----GGSRRSSSGMRPSKTLFVINFDAQNTRTRDLERHFEP 119
Query: 462 YGKIVNVRIRRNFAFIQYEEQEDATRALDATNNSKLMDKVISVEYAMKDDDARGNGHSPE 641
YGKIVNVRIRRNFAFIQYE QEDATRALDATN+SKLMDKVISVEYA+KDDD+RGNG+SPE
Sbjct: 120 YGKIVNVRIRRNFAFIQYESQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYSPE 179
Query: 642 RRRDRSPERRRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGR-RRSPSPYKRTRR 818
RRRDRSP+RRRRSPSPY+RERGSPDYGRG SPV A+KRERTSPDYGR RRSPSPYKR R
Sbjct: 180 RRRDRSPDRRRRSPSPYRRERGSPDYGRGASPV-AHKRERTSPDYGRGRRSPSPYKRA-R 237
Query: 819 SSPEYGRDHRHR------GNESPRRRERAASPRYSRSP---DNKRERVSPDRSPFKKEGL 971
SP+Y RD R R N + R R SRSP + +RE SP P++K
Sbjct: 238 LSPDYKRDDRRRERVASPENGAVRNRSPRKGRGESRSPPPYEKRRESRSP--PPYEKRRE 295
Query: 972 KNGDGEVDSPR---RERSRSSPENGQVESPGSIGRRDSDGGYDGADSPPMQKSRSRSPPA 1142
+ R R RS+SSPENGQVESPG I ++ GYDGADSP + S SRSPPA
Sbjct: 296 SRSPPPYEKRRERSRSRSKSSPENGQVESPGQIMEEEAGRGYDGADSPIRESSPSRSPPA 355
Query: 1143 EE 1148
EE
Sbjct: 356 EE 357
>gi|238481546|ref|NP_001154774.1| arginine/serine-rich-splicing factor RSP41
[Arabidopsis thaliana]
Length = 324
Score = 420 bits (1078), Expect = 4e-115
Identities = 234/329 (71%), Positives = 254/329 (77%), Gaps = 22/329 (6%)
Frame = +3
Query: 204 FAFVYMEDERDAEDAIRALDRIEFGRKGRRLRVEWTKGERGGDRRSGGGGGGSRRSSS-L 380
FAFVYMEDERDAEDAIRALDR E+GR GRRLRVEWTK +RGG RS GGSRRSSS L
Sbjct: 4 FAFVYMEDERDAEDAIRALDRFEYGRTGRRLRVEWTKNDRGGAGRS----GGSRRSSSGL 59
Query: 381 RPSKTLFVINFDADNTRTRGLERHFEPYGKIVNVRIRRNFAFIQYEEQEDATRALDATNN 560
RPSKTLFVINFDA NTRTR LERHFEPYGKIVNVRIRRNFAFIQYE QEDATRALDATN+
Sbjct: 60 RPSKTLFVINFDAQNTRTRDLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNS 119
Query: 561 SKLMDKVISVEYAMKDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGGSPV 740
SKLMDKVISVEYA+KDDD+RGNG+SPERRRDRSP+RRRRSPSPY+RERGSPDYGRG SPV
Sbjct: 120 SKLMDKVISVEYAVKDDDSRGNGYSPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPV 179
Query: 741 AAYKRERTSPDYGR-RRSPSPYKRTRRSSPEYGRDHRHR------GNESPRRRERAASPR 899
A+KRERTSPDYGR RRSPSPYKR R SP+Y RD R R N + R R
Sbjct: 180 -AHKRERTSPDYGRGRRSPSPYKRA-RLSPDYKRDDRRRERVASPENGAVRNRSPRKGRG 237
Query: 900 YSRSP---DNKRERVSPDRSPFKKEGLKNGDGEVDSPR---RERSRSSPENGQVESPGSI 1061
SRSP + +RE SP P++K + R R RS+SSPENGQVESPG I
Sbjct: 238 ESRSPPPYEKRRESRSP--PPYEKRRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQI 295
Query: 1062 GRRDSDGGYDGADSPPMQKSRSRSPPAEE 1148
++ GYDGADSP + S SRSPPAEE
Sbjct: 296 MEVEAGRGYDGADSPIRESSPSRSPPAEE 324
>gi|227206136|dbj|BAH57123.1| AT5G52040 [Arabidopsis thaliana]
Length = 323
Score = 417 bits (1071), Expect = 2e-114
Identities = 234/329 (71%), Positives = 256/329 (77%), Gaps = 23/329 (6%)
Frame = +3
Query: 204 FAFVYMEDERDAEDAIRALDRIEFGRKGRRLRVEWTKGERGGDRRSGGGGGGSRRSSS-L 380
FAFVYMEDERDAEDAIRALDR E+GR GRRLRVEWTK +RGG RS GGSRRSSS L
Sbjct: 4 FAFVYMEDERDAEDAIRALDRFEYGRTGRRLRVEWTKNDRGGAGRS----GGSRRSSSGL 59
Query: 381 RPSKTLFVINFDADNTRTRGLERHFEPYGKIVNVRIRRNFAFIQYEEQEDATRALDATNN 560
RPSKTLFVINFDA NTRTR LERHFEPYGKIVNVRIRRNFAFIQYE QEDATRALDATN+
Sbjct: 60 RPSKTLFVINFDAQNTRTRDLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNS 119
Query: 561 SKLMDKVISVEYAMKDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGGSPV 740
SKLMDKVISVEYA+KDDD+RGNG+SPERRRDRSP+RRRRSPSPY+RERGSPDYGRG SPV
Sbjct: 120 SKLMDKVISVEYAVKDDDSRGNGYSPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPV 179
Query: 741 AAYKRERTSPDYGR-RRSPSPYKRTRRSSPEYGRDHRHR------GNESPRRRERAASPR 899
A+KRERTSPDYGR RRSPSPYKR R SP+Y RD R R N + R R
Sbjct: 180 -AHKRERTSPDYGRGRRSPSPYKRA-RLSPDYKRDDRRRERVASPENGAVRNRSPRKGRG 237
Query: 900 YSRSP---DNKRERVSPDRSPFKKEGLKNGDGEVDSPR---RERSRSSPENGQVESPGSI 1061
SRSP + +RE SP P++K + R R RS+SSPENGQVESPG I
Sbjct: 238 ESRSPPPYEKRRESRSP--PPYEKRRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQI 295
Query: 1062 GRRDSDGGYDGADSPPMQKSRSRSPPAEE 1148
++ GYDGADS P+++S SRSPPAEE
Sbjct: 296 MEVEAGRGYDGADS-PIRESPSRSPPAEE 323
>gi|238481544|ref|NP_001154773.1| arginine/serine-rich-splicing factor RSP41
[Arabidopsis thaliana]
Length = 329
Score = 417 bits (1071), Expect = 2e-114
Identities = 234/329 (71%), Positives = 256/329 (77%), Gaps = 23/329 (6%)
Frame = +3
Query: 204 FAFVYMEDERDAEDAIRALDRIEFGRKGRRLRVEWTKGERGGDRRSGGGGGGSRRSSS-L 380
FAFVYMEDERDAEDAIRALDR E+GR GRRLRVEWTK +RGG RS GGSRRSSS L
Sbjct: 10 FAFVYMEDERDAEDAIRALDRFEYGRTGRRLRVEWTKNDRGGAGRS----GGSRRSSSGL 65
Query: 381 RPSKTLFVINFDADNTRTRGLERHFEPYGKIVNVRIRRNFAFIQYEEQEDATRALDATNN 560
RPSKTLFVINFDA NTRTR LERHFEPYGKIVNVRIRRNFAFIQYE QEDATRALDATN+
Sbjct: 66 RPSKTLFVINFDAQNTRTRDLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNS 125
Query: 561 SKLMDKVISVEYAMKDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGGSPV 740
SKLMDKVISVEYA+KDDD+RGNG+SPERRRDRSP+RRRRSPSPY+RERGSPDYGRG SPV
Sbjct: 126 SKLMDKVISVEYAVKDDDSRGNGYSPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPV 185
Query: 741 AAYKRERTSPDYGR-RRSPSPYKRTRRSSPEYGRDHRHR------GNESPRRRERAASPR 899
A+KRERTSPDYGR RRSPSPYKR R SP+Y RD R R N + R R
Sbjct: 186 -AHKRERTSPDYGRGRRSPSPYKRA-RLSPDYKRDDRRRERVASPENGAVRNRSPRKGRG 243
Query: 900 YSRSP---DNKRERVSPDRSPFKKEGLKNGDGEVDSPR---RERSRSSPENGQVESPGSI 1061
SRSP + +RE SP P++K + R R RS+SSPENGQVESPG I
Sbjct: 244 ESRSPPPYEKRRESRSP--PPYEKRRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQI 301
Query: 1062 GRRDSDGGYDGADSPPMQKSRSRSPPAEE 1148
++ GYDGADS P+++S SRSPPAEE
Sbjct: 302 MEVEAGRGYDGADS-PIRESPSRSPPAEE 329
>gi|224120150|ref|XP_002318257.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 394 bits (1012), Expect = 2e-107
Identities = 208/326 (63%), Positives = 243/326 (74%), Gaps = 28/326 (8%)
Frame = +3
Query: 108 FCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEFGRKG 287
FCGNFEYDAR+ +LERLF++YGRVERVDMKAGFAF+YMEDERDAEDAIR LDR+EFGRKG
Sbjct: 5 FCGNFEYDARQTELERLFKRYGRVERVDMKAGFAFIYMEDERDAEDAIRGLDRVEFGRKG 64
Query: 288 RRLRVEWTKGERGGDRRSGGGGGGSRRSSSLRPSKTLFVINFDADNTRTRGLERHFEPYG 467
RRL VEWTK ERG + GG SR+S++ RPSKTLFVINFD +TRT+ LERHFEPYG
Sbjct: 65 RRLHVEWTKQERGARQ----PGGSSRKSANTRPSKTLFVINFDPHHTRTKDLERHFEPYG 120
Query: 468 KIVNVRIRRNFAFIQYEEQEDATRALDATNNSKLMDKVISVEYAMKDDDARGNGHSPERR 647
+IV+VRIRRNFAF+QYE QEDAT+ALDATN SKL+ +VISVEYA +DD R +GHSP+R
Sbjct: 121 RIVSVRIRRNFAFVQYEAQEDATKALDATNMSKLLYRVISVEYAARDDGERKDGHSPDRS 180
Query: 648 RDRSPER----RRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTR 815
RDRSP+R RRRSPSPY+RERGS DYG G SP Y++ER SPD G RRSPSPY+R
Sbjct: 181 RDRSPDRRGHDRRRSPSPYRRERGSTDYGHGPSP---YRKERVSPDSGCRRSPSPYRRD- 236
Query: 816 RSSPEYGRDHRHRGNESPRRRERAASPRYSRSPDNKRERVSPDRSPFKKEGLK--NGDGE 989
R+SP+YGR SP RRERA S P R P++K+ NG+G
Sbjct: 237 RASPDYGRG----STRSPSRRERAGSDHGH----------GPSRGPYRKDKASPVNGNGP 282
Query: 990 VDSPRRERSRSSPENGQVESPGSIGR 1067
DSP + + SPENG+V S GR
Sbjct: 283 SDSPYQREEKLSPENGRVPSRSPYGR 308
>gi|224136870|ref|XP_002322436.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 391 bits (1002), Expect = 2e-106
Identities = 217/347 (62%), Positives = 251/347 (72%), Gaps = 31/347 (8%)
Frame = +3
Query: 108 FCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEFGRKG 287
FCGNFEYDAR+ +LERLF++YGRVERVDMK+GFAF+YMEDERDAEDAIR LDR+EFGRKG
Sbjct: 5 FCGNFEYDARQTELERLFKRYGRVERVDMKSGFAFIYMEDERDAEDAIRGLDRVEFGRKG 64
Query: 288 RRLRVEWTKGERGGDRRSGGGGGGSRRSSSLRPSKTLFVINFDADNTRTRGLERHFEPYG 467
RRLRVEWTK ERG R GG SRRS++ RPSKTLFVINFD +TRT+ LERHFEPYG
Sbjct: 65 RRLRVEWTKQERGIRR----PGGTSRRSTNTRPSKTLFVINFDPHHTRTKDLERHFEPYG 120
Query: 468 KIVNVRIRRNFAFIQYEEQEDATRALDATNNSKLMDKVISVEYAMKDDDARGNGHSPERR 647
+IV+VRIRRNFAF+QYE QEDAT+ALDATN SKL+D+VISVEYA++DDD R +G+SP+R
Sbjct: 121 RIVSVRIRRNFAFVQYEAQEDATKALDATNLSKLLDRVISVEYAVRDDDERKDGYSPDRS 180
Query: 648 RDRSPER----RRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTR 815
RDRSP+R RRRSPSPY+RERGSPDYGRG SP Y++ER SPDYGRRRSPSPY+R
Sbjct: 181 RDRSPDRRGHDRRRSPSPYRRERGSPDYGRGPSP---YRKERGSPDYGRRRSPSPYRRD- 236
Query: 816 RSSPEYGRDHRHRGNESPRRRERAA---SPRYSRSPDNKRERVSPDRSPFKKEGLKNGDG 986
R+SP+YGR + SP RRERA SP R P SP R +G G
Sbjct: 237 RASPDYGRG----TSRSPYRRERAGKRISPENGRGPSR-----SPYRRERSNQGHGRGSS 287
Query: 987 ------EVDSPRRERSRS-SPENGQVESPGSIGRRDSDGGYDGADSP 1106
E +P R S SP +SP + R D DSP
Sbjct: 288 HSPYGRERPNPDNGRGSSRSPTERDGDSPENGQLRSPSSIPDERDSP 334
>gi|41323931|gb|AAS00039.1| splicing factor-like protein [Vitis riparia]
Length = 478
Score = 365 bits (936), Expect = 1e-098
Identities = 205/313 (65%), Positives = 236/313 (75%), Gaps = 32/313 (10%)
Frame = +3
Query: 108 FCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEFGRKG 287
FCGNF+YDAR+ DLERLFR+YG+V+RVDMK GFAF+YMEDERDAEDAIR LDR FGRKG
Sbjct: 5 FCGNFDYDARQSDLERLFRRYGKVDRVDMKTGFAFIYMEDERDAEDAIRGLDRTGFGRKG 64
Query: 288 RRLRVEWTKGERGGDRRSGGGGGGSRRSS-SLRPSKTLFVINFDADNTRTRGLERHFEPY 464
RRLRVEWTK ERG R S GSRRSS +LRP+KTLFVINFD NTRTR LERHF+PY
Sbjct: 65 RRLRVEWTKQERGIRRPS-----GSRRSSTNLRPAKTLFVINFDPYNTRTRDLERHFDPY 119
Query: 465 GKIVNVRIRRNFAFIQYEEQEDATRALDATNNSKLMDKVISVEYAMKDDDARGNGHSPE- 641
GKI+N+RIRRNFAFIQYE QEDATRAL+ATN SKLMD+VISVEYA++DDD R NG+SP+
Sbjct: 120 GKILNIRIRRNFAFIQYESQEDATRALEATNMSKLMDRVISVEYAVRDDDERRNGYSPDG 179
Query: 642 RRRDRSPER---RRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRT 812
RRRD+S ER + RS SPY+RERGSPDYGRG SP +AY+RER SPDYGR SPSP +R
Sbjct: 180 RRRDKSSERSYDKGRSLSPYRRERGSPDYGRGSSP-SAYRRERASPDYGRDPSPSP-RRR 237
Query: 813 RRSSPEYGRDHRHRGNESPRRRERAASPRYSRSPDNKRERVSPDRSPFKKEGLKN----- 977
R+ P++GR + S RRER S D+ R P RSP++ E
Sbjct: 238 DRAMPDHGRSR----SPSHHRRERT-------SHDSAR---GPSRSPYRSERSDRAIPDY 283
Query: 978 GDGEVDSP-RRER 1013
G G SP RRE+
Sbjct: 284 GRGRSPSPGRREK 296
>gi|147863191|emb|CAN82624.1| hypothetical protein VITISV_021436 [Vitis
vinifera]
Length = 479
Score = 365 bits (935), Expect = 1e-098
Identities = 205/313 (65%), Positives = 236/313 (75%), Gaps = 32/313 (10%)
Frame = +3
Query: 108 FCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEFGRKG 287
FCGNF+YDAR+ DLERLFR+YG+V+RVDMK GFAF+YMEDERDAEDAIR LDR FGRKG
Sbjct: 5 FCGNFDYDARQSDLERLFRRYGKVDRVDMKTGFAFIYMEDERDAEDAIRGLDRTGFGRKG 64
Query: 288 RRLRVEWTKGERGGDRRSGGGGGGSRRSS-SLRPSKTLFVINFDADNTRTRGLERHFEPY 464
RRLRVEWTK ERG R S GSRRSS +LRP+KTLFVINFD NTRTR LERHF+PY
Sbjct: 65 RRLRVEWTKQERGIRRPS-----GSRRSSTNLRPAKTLFVINFDPYNTRTRDLERHFDPY 119
Query: 465 GKIVNVRIRRNFAFIQYEEQEDATRALDATNNSKLMDKVISVEYAMKDDDARGNGHSPE- 641
GKI+N+RIRRNFAFIQYE QEDATRAL+ATN SKLMD+VISVEYA++DDD R NG+SP+
Sbjct: 120 GKILNIRIRRNFAFIQYESQEDATRALEATNMSKLMDRVISVEYAVRDDDERRNGYSPDG 179
Query: 642 RRRDRSPER---RRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRT 812
RRRD+S ER + RS SPY+RERGSPDYGRG SP +AY+RER SPDYGR SPSP +R
Sbjct: 180 RRRDKSSERSYDKGRSLSPYRRERGSPDYGRGSSP-SAYRRERASPDYGRDPSPSP-RRR 237
Query: 813 RRSSPEYGRDHRHRGNESPRRRERAASPRYSRSPDNKRERVSPDRSPFKKEGLKN----- 977
R+ P++GR + S RRER S D+ R P RSP++ E
Sbjct: 238 DRAIPDHGRSR----SPSHHRRERT-------SHDSAR---GPSRSPYRSERSDRAIPDY 283
Query: 978 GDGEVDSP-RRER 1013
G G SP RRE+
Sbjct: 284 GRGRSPSPGRREK 296
>gi|255539555|ref|XP_002510842.1| arginine/serine-rich splicing factor, putative
[Ricinus communis]
Length = 331
Score = 327 bits (836), Expect = 4e-087
Identities = 194/331 (58%), Positives = 230/331 (69%), Gaps = 30/331 (9%)
Frame = +3
Query: 231 RDAEDAIRALDRIEFGRKGRRLRVEWTKGERGGDRRSGGGGGGSRRSS-SLRPSKTLFVI 407
RDAEDAIR LDRIEFGRKGRRLRVEWTK ERG R G SRRSS + RPSKTLFVI
Sbjct: 5 RDAEDAIRGLDRIEFGRKGRRLRVEWTKQERGIRR-----PGNSRRSSTNTRPSKTLFVI 59
Query: 408 NFDADNTRTRGLERHFEPYGKIVNVRIRRNFAFIQYEEQEDATRALDATNNSKLMDKVIS 587
NFD +TRT+ LERHFEPYG+IV+VRIRRNFAF+QYE Q+DAT+AL+ATN SKLMD+VIS
Sbjct: 60 NFDPHHTRTKDLERHFEPYGRIVSVRIRRNFAFVQYESQDDATKALEATNMSKLMDRVIS 119
Query: 588 VEYAMKDDDARGNGHSPERRRDRSPER----RRRSPSPYKRERGSPDYGRGGSPVAAYKR 755
VEYA++DDD R NG+SP+R RDRSP+R R+RS SPY+RERGSPDYGRG SP Y+R
Sbjct: 120 VEYAVRDDDERRNGYSPDRGRDRSPDRRSHDRKRSSSPYRRERGSPDYGRGPSP-GPYRR 178
Query: 756 ERTSPDYGRRRSPSPYKRTRRSSPEYGRDHRHRGNESPRRRERAASPR---YSRSPDNKR 926
ER SPDYGRRRSPSPYKR R+SP+YGR + SP RRER S SRSP + R
Sbjct: 179 ERASPDYGRRRSPSPYKRD-RASPDYGR----ASSRSPYRRERPGSDHGRGSSRSPYH-R 232
Query: 927 ERVSPDR------SPFKKEGLK--NGDGEVDSPRRERSRSSPENGQVESPGSIGRRDSDG 1082
ER SPD SP+++E NG SP R R++P+NG+ S S +D +
Sbjct: 233 ERASPDNGRGHSASPYQREKASPDNGRDRSRSP-YGRERTNPDNGR-GSSRSPYEKDVNS 290
Query: 1083 GYDGADSPPMQKSRSRSPPAEE*IGKGIHQK 1175
+G + P R P E I +H++
Sbjct: 291 PENGRRTSPNSMHEERDSPNEGGIESPMHER 321
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,873,197,794,269
Number of Sequences: 15229318
Number of Extensions: 2873197794269
Number of Successful Extensions: 688350487
Number of sequences better than 0.0: 0
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