BLASTX 7.6.2
Query= UN24217 /QuerySize=1352
(1351 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P92965|RSP40_ARATH Arginine/serine-rich-splicing factor RSP40... 619 2e-176
sp|P92966|RSP41_ARATH Arginine/serine-rich-splicing factor RSP41... 488 4e-137
sp|P92964|RSP31_ARATH Arginine/serine-rich-splicing factor RSP31... 289 6e-077
sp|Q13242|SFRS9_HUMAN Splicing factor, arginine/serine-rich 9 OS... 75 8e-013
sp|Q10021|RSP5_CAEEL Probable splicing factor, arginine/serine-r... 74 2e-012
sp|Q23121|RSP1_CAEEL Probable splicing factor, arginine/serine-r... 68 1e-010
sp|P26686|SRR55_DROME Serine-arginine protein 55 OS=Drosophila m... 67 3e-010
>sp|P92965|RSP40_ARATH Arginine/serine-rich-splicing factor RSP40 OS=Arabidopsis
thaliana GN=RSP40 PE=1 SV=2
Length = 350
Score = 619 bits (1594), Expect = 2e-176
Identities = 312/355 (87%), Positives = 331/355 (93%), Gaps = 9/355 (2%)
Frame = +3
Query: 96 MKPVFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEF 275
MKPVFCGNFEYDAREGDLERLFRKYG+VERVDMKAGFAFVYMEDERDAEDAIRALDR EF
Sbjct: 1 MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60
Query: 276 GRKGRRLRVEWTKGERGGDRRSGGGGGGSRRSSSLRPSKTLFVINFDADNTRTRGLERHF 455
GRKGRRLRVEWTK ERGGD+RS GGG R SSS+RPSKTLFVINFDADNTRTR LE+HF
Sbjct: 61 GRKGRRLRVEWTKSERGGDKRS--GGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHF 118
Query: 456 EPYGKIVNVRIRRNFAFIQYEEQEDATRALDATNNSKLMDKVISVEYAMKDDDARGNGHS 635
EPYGKIVNVRIRRNFAFIQYE QEDATRALDA+NNSKLMDKVISVEYA+KDDDARGNGHS
Sbjct: 119 EPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHS 178
Query: 636 PERRRDRSPERRRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTR 815
PERRRDRSPERRRRSPSPYKRERGSPDYGRG SPVAAY++ERTSPDYGRRRSPSPYK++R
Sbjct: 179 PERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSR 238
Query: 816 RSSPEYGRDHRHRGNESPRRRERAASP-RYSRSPDNKRERVSPDRSPFKKEGLKNGDGEV 992
R SPEYGRD RGN+SPRRRER ASP +YSRSP+NKRER+SP+ SPFKKE +NG GEV
Sbjct: 239 RGSPEYGRD--RRGNDSPRRRERVASPTKYSRSPNNKRERMSPNHSPFKKESPRNGVGEV 296
Query: 993 DSP--RRERSRSSPENGQVESPGSIGRRDSDGGYDGADSPPMQKSRS-RSPPAEE 1148
+SP RRERSRSSPENGQVESPGSIGRRDSDGGYDGA+S PMQKSRS RSPPA+E
Sbjct: 297 ESPIERRERSRSSPENGQVESPGSIGRRDSDGGYDGAES-PMQKSRSPRSPPADE 350
>sp|P92966|RSP41_ARATH Arginine/serine-rich-splicing factor RSP41 OS=Arabidopsis
thaliana GN=RSP41 PE=1 SV=2
Length = 356
Score = 488 bits (1256), Expect = 4e-137
Identities = 268/365 (73%), Positives = 291/365 (79%), Gaps = 23/365 (6%)
Frame = +3
Query: 96 MKPVFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEF 275
MKPVFCGNFEYDARE DLERLFRKYG+VERVDMKAGFAFVYMEDERDAEDAIRALDR E+
Sbjct: 1 MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60
Query: 276 GRKGRRLRVEWTKGERGGDRRSGGGGGGSRRSSS-LRPSKTLFVINFDADNTRTRGLERH 452
GR GRRLRVEWTK +RGG RS GGSRRSSS LRPSKTLFVINFDA NTRTR LERH
Sbjct: 61 GRTGRRLRVEWTKNDRGGAGRS----GGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERH 116
Query: 453 FEPYGKIVNVRIRRNFAFIQYEEQEDATRALDATNNSKLMDKVISVEYAMKDDDARGNGH 632
FEPYGKIVNVRIRRNFAFIQYE QEDATRALDATN+SKLMDKVISVEYA+KDDD+RGNG+
Sbjct: 117 FEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGY 176
Query: 633 SPERRRDRSPERRRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGR-RRSPSPYKR 809
SPERRRDRSP+RRRRSPSPY+RERGSPDYGRG SPV A+KRERTSPDYGR RRSPSPYKR
Sbjct: 177 SPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPV-AHKRERTSPDYGRGRRSPSPYKR 235
Query: 810 TRRSSPEYGRDHRHR------GNESPRRRERAASPRYSRSP---DNKRERVSPDRSPFKK 962
R SP+Y RD R R N + R R SRSP + +RE SP P++K
Sbjct: 236 A-RLSPDYKRDDRRRERVASPENGAVRNRSPRKGRGESRSPPPYEKRRESRSP--PPYEK 292
Query: 963 EGLKNGDGEVDSPR---RERSRSSPENGQVESPGSIGRRDSDGGYDGADSPPMQKSRSRS 1133
+ R R RS+SSPENGQVESPG I ++ GYDGADS P+++S SRS
Sbjct: 293 RRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQIMEVEAGRGYDGADS-PIRESPSRS 351
Query: 1134 PPAEE 1148
PPAEE
Sbjct: 352 PPAEE 356
>sp|P92964|RSP31_ARATH Arginine/serine-rich-splicing factor RSP31 OS=Arabidopsis
thaliana GN=RSP31 PE=1 SV=2
Length = 264
Score = 289 bits (737), Expect = 6e-077
Identities = 159/278 (57%), Positives = 190/278 (68%), Gaps = 27/278 (9%)
Frame = +3
Query: 96 MKPVFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEF 275
M+PVF GNFEY+ R+ DLERLF KYGRV+RVDMK+G+AFVY EDERDAEDAIR LD F
Sbjct: 1 MRPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKSGYAFVYFEDERDAEDAIRKLDNFPF 60
Query: 276 GRKGRRLRVEWTKGERGGDRRSGGGGGGSRRSSSLRPSKTLFVINFDADNTRTRGLERHF 455
G + RRL VEW KGERG R G ++ S+L+P+KTLFVINFD T+ +E+HF
Sbjct: 61 GYEKRRLSVEWAKGERGRPR------GDAKAPSNLKPTKTLFVINFDPIRTKEHDIEKHF 114
Query: 456 EPYGKIVNVRIRRNFAFIQYEEQEDATRALDATNNSKLMDKVISVEYAMKDDDARGNGHS 635
EPYGK+ NVRIRRNF+F+Q+E QEDAT+AL+AT SK++D+V+SVEYA+KDDD R
Sbjct: 115 EPYGKVTNVRIRRNFSFVQFETQEDATKALEATQRSKILDRVVSVEYALKDDDER----- 169
Query: 636 PERRRDRSPERRRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSP------S 797
+R RSP RRS SP R R SPDYGR SP + R SPDYGR RSP
Sbjct: 170 DDRNGGRSP---RRSLSPVYRRRPSPDYGRRPSP---GQGRRPSPDYGRARSPEYDRYKG 223
Query: 798 PYKRTRRSSPEYGRDHRHRGNE-SP---RRRERAASPR 899
P RR SP+YGR G + SP R R R+ PR
Sbjct: 224 PAAYERRRSPDYGRRSSDYGRQRSPGYDRYRSRSPVPR 261
>sp|Q13242|SFRS9_HUMAN Splicing factor, arginine/serine-rich 9 OS=Homo sapiens
GN=SFRS9 PE=1 SV=1
Length = 221
Score = 75 bits (184), Expect = 8e-013
Identities = 59/167 (35%), Positives = 83/167 (49%), Gaps = 31/167 (18%)
Frame = +3
Query: 105 VFCGNFEYDAREGDLERLFRKYGRVERVDMK-----AGFAFVYMEDERDAEDAIRALDRI 269
++ GN D RE DLE LF KYGR+ +++K FAFV ED RDAEDAI +
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 270 EFGRKGRRLRVEW--TKGERGGDRRSGGGGGGSRRS------SSLRPSKTLFVINFDADN 425
++G+ RLRVE+ T G RGG R G G +RRS S L PS +
Sbjct: 76 DYGQ--CRLRVEFPRTYGGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGS---------- 123
Query: 426 TRTRGLERHFEPYGKIVNVRIRRN----FAFIQYEEQEDATRALDAT 554
+ L+ H G + ++++ +++ E+ E A R LD T
Sbjct: 124 --WQDLKDHMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKLDDT 168
>sp|Q10021|RSP5_CAEEL Probable splicing factor, arginine/serine-rich 5
OS=Caenorhabditis elegans GN=rsp-5 PE=2 SV=3
Length = 208
Score = 74 bits (181), Expect = 2e-012
Identities = 41/100 (41%), Positives = 53/100 (53%)
Frame = +3
Query: 96 MKPVFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEF 275
M ++ G Y+ARE D+ER + YG++ + MK GFAFV ED RDAEDA LD
Sbjct: 1 MPRLYLGKIPYNARERDVERFLKGYGKINNISMKYGFAFVDFEDSRDAEDACHDLDGKTM 60
Query: 276 GRKGRRLRVEWTKGERGGDRRSGGGGGGSRRSSSLRPSKT 395
RL VE +G+ G+ R G R S R S+T
Sbjct: 61 EGSSMRLVVEMARGKPRGNDRHGSRSPRRRSRSPRRRSRT 100
>sp|Q23121|RSP1_CAEEL Probable splicing factor, arginine/serine-rich 1
OS=Caenorhabditis elegans GN=rsp-1 PE=2 SV=1
Length = 312
Score = 68 bits (165), Expect = 1e-010
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = +3
Query: 105 VFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEFGRK 284
++ G E D+E FR YG++ V +K GF FV +D+RDAEDA+ L+ E G
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELG-- 62
Query: 285 GRRLRVEWTKGERGGDRRSGGGGGG 359
G R+ ++++K GG R G GGGG
Sbjct: 63 GERVILDYSKPRGGGGDRGGFGGGG 87
>sp|P26686|SRR55_DROME Serine-arginine protein 55 OS=Drosophila melanogaster
GN=B52 PE=1 SV=4
Length = 376
Score = 67 bits (162), Expect = 3e-010
Identities = 41/106 (38%), Positives = 56/106 (52%), Gaps = 13/106 (12%)
Frame = +3
Query: 105 VFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEFGRK 284
V+ G Y RE DLER F+ YGR + +K G+ FV ED RDA+DA+ L+ E
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKEL--L 63
Query: 285 GRRLRVEWTKG-----------ERGGDRRSGGGGGGSRRSSSLRPS 389
G R+ VE +G +R G RR GGGG + ++ + R S
Sbjct: 64 GERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSS 109
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,823,088,839
Number of Sequences: 518415
Number of Extensions: 99823088839
Number of Successful Extensions: 648260893
Number of sequences better than 0.0: 0
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