BLASTX 7.6.2
Query= UN24217 /QuerySize=1352
(1351 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G25500.1 | Symbols: ATRSP35, ATRSP40, AT-SRP40... 619 2e-177
TAIR9_protein||AT4G25500.3 | Symbols: ATRSP35, ATRSP40, AT-SRP40... 548 5e-156
TAIR9_protein||AT4G25500.2 | Symbols: ATRSP35, ATRSP40, AT-SRP40... 535 3e-152
TAIR9_protein||AT5G52040.2 | Symbols: ATRSP41 | ATRSP41; RNA bin... 492 4e-139
TAIR9_protein||AT5G52040.1 | Symbols: ATRSP41 | ATRSP41; RNA bin... 489 2e-138
TAIR9_protein||AT5G52040.4 | Symbols: | ATRSP41; RNA binding / ... 423 2e-118
TAIR9_protein||AT5G52040.3 | Symbols: | ATRSP41; RNA binding / ... 418 7e-117
TAIR9_protein||AT3G61860.1 | Symbols: ATRSP31, RSP31 | RSP31; RN... 289 5e-078
TAIR9_protein||AT2G46610.1 | Symbols: | arginine/serine-rich sp... 261 1e-069
TAIR9_protein||AT2G46610.2 | Symbols: | arginine/serine-rich sp... 213 3e-055
>TAIR9_protein||AT4G25500.1 | Symbols: ATRSP35, ATRSP40, AT-SRP40, RSP35 |
ATRSP35; RNA binding / nucleic acid binding / nucleotide binding |
chr4:13025168-13027243 FORWARD
Length = 351
Score = 619 bits (1595), Expect = 2e-177
Identities = 312/356 (87%), Positives = 331/356 (92%), Gaps = 9/356 (2%)
Frame = +3
Query: 96 MKPVFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEF 275
MKPVFCGNFEYDAREGDLERLFRKYG+VERVDMKAGFAFVYMEDERDAEDAIRALDR EF
Sbjct: 1 MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60
Query: 276 GRKGRRLRVEWTKGERGGDRRSGGGGGGSRRSSSLRPSKTLFVINFDADNTRTRGLERHF 455
GRKGRRLRVEWTK ERGGD+RS GGG R SSS+RPSKTLFVINFDADNTRTR LE+HF
Sbjct: 61 GRKGRRLRVEWTKSERGGDKRS--GGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHF 118
Query: 456 EPYGKIVNVRIRRNFAFIQYEEQEDATRALDATNNSKLMDKVISVEYAMKDDDARGNGHS 635
EPYGKIVNVRIRRNFAFIQYE QEDATRALDA+NNSKLMDKVISVEYA+KDDDARGNGHS
Sbjct: 119 EPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHS 178
Query: 636 PERRRDRSPERRRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTR 815
PERRRDRSPERRRRSPSPYKRERGSPDYGRG SPVAAY++ERTSPDYGRRRSPSPYK++R
Sbjct: 179 PERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSR 238
Query: 816 RSSPEYGRDHRHRGNESPRRRERAASP-RYSRSPDNKRERVSPDRSPFKKEGLKNGDGEV 992
R SPEYGRD RGN+SPRRRER ASP +YSRSP+NKRER+SP+ SPFKKE +NG GEV
Sbjct: 239 RGSPEYGRD--RRGNDSPRRRERVASPTKYSRSPNNKRERMSPNHSPFKKESPRNGVGEV 296
Query: 993 DSP--RRERSRSSPENGQVESPGSIGRRDSDGGYDGADSPPMQKSRS-RSPPAEE* 1151
+SP RRERSRSSPENGQVESPGSIGRRDSDGGYDGA+S PMQKSRS RSPPA+E*
Sbjct: 297 ESPIERRERSRSSPENGQVESPGSIGRRDSDGGYDGAES-PMQKSRSPRSPPADE* 351
>TAIR9_protein||AT4G25500.3 | Symbols: ATRSP35, ATRSP40, AT-SRP40 | ATRSP35; RNA
binding / nucleic acid binding / nucleotide binding |
chr4:13025850-13027243 FORWARD
Length = 318
Score = 548 bits (1410), Expect = 5e-156
Identities = 278/321 (86%), Positives = 296/321 (92%), Gaps = 9/321 (2%)
Frame = +3
Query: 201 GFAFVYMEDERDAEDAIRALDRIEFGRKGRRLRVEWTKGERGGDRRSGGGGGGSRRSSSL 380
GFAFVYMEDERDAEDAIRALDR EFGRKGRRLRVEWTK ERGGD+RS GGG R SSS+
Sbjct: 3 GFAFVYMEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSERGGDKRS--GGGSRRSSSSM 60
Query: 381 RPSKTLFVINFDADNTRTRGLERHFEPYGKIVNVRIRRNFAFIQYEEQEDATRALDATNN 560
RPSKTLFVINFDADNTRTR LE+HFEPYGKIVNVRIRRNFAFIQYE QEDATRALDA+NN
Sbjct: 61 RPSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNN 120
Query: 561 SKLMDKVISVEYAMKDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGGSPV 740
SKLMDKVISVEYA+KDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRG SPV
Sbjct: 121 SKLMDKVISVEYAVKDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPV 180
Query: 741 AAYKRERTSPDYGRRRSPSPYKRTRRSSPEYGRDHRHRGNESPRRRERAASP-RYSRSPD 917
AAY++ERTSPDYGRRRSPSPYK++RR SPEYGRD RGN+SPRRRER ASP +YSRSP+
Sbjct: 181 AAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRD--RRGNDSPRRRERVASPTKYSRSPN 238
Query: 918 NKRERVSPDRSPFKKEGLKNGDGEVDSP--RRERSRSSPENGQVESPGSIGRRDSDGGYD 1091
NKRER+SP+ SPFKKE +NG GEV+SP RRERSRSSPENGQVESPGSIGRRDSDGGYD
Sbjct: 239 NKRERMSPNHSPFKKESPRNGVGEVESPIERRERSRSSPENGQVESPGSIGRRDSDGGYD 298
Query: 1092 GADSPPMQKSRS-RSPPAEE* 1151
GA+S PMQKSRS RSPPA+E*
Sbjct: 299 GAES-PMQKSRSPRSPPADE* 318
>TAIR9_protein||AT4G25500.2 | Symbols: ATRSP35, ATRSP40, AT-SRP40 | ATRSP35; RNA
binding / nucleic acid binding / nucleotide binding |
chr4:13026073-13027243 FORWARD
Length = 310
Score = 535 bits (1377), Expect = 3e-152
Identities = 272/315 (86%), Positives = 290/315 (92%), Gaps = 9/315 (2%)
Frame = +3
Query: 219 MEDERDAEDAIRALDRIEFGRKGRRLRVEWTKGERGGDRRSGGGGGGSRRSSSLRPSKTL 398
MEDERDAEDAIRALDR EFGRKGRRLRVEWTK ERGGD+RS GGG R SSS+RPSKTL
Sbjct: 1 MEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSERGGDKRS--GGGSRRSSSSMRPSKTL 58
Query: 399 FVINFDADNTRTRGLERHFEPYGKIVNVRIRRNFAFIQYEEQEDATRALDATNNSKLMDK 578
FVINFDADNTRTR LE+HFEPYGKIVNVRIRRNFAFIQYE QEDATRALDA+NNSKLMDK
Sbjct: 59 FVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDK 118
Query: 579 VISVEYAMKDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGGSPVAAYKRE 758
VISVEYA+KDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRG SPVAAY++E
Sbjct: 119 VISVEYAVKDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKE 178
Query: 759 RTSPDYGRRRSPSPYKRTRRSSPEYGRDHRHRGNESPRRRERAASP-RYSRSPDNKRERV 935
RTSPDYGRRRSPSPYK++RR SPEYGRD RGN+SPRRRER ASP +YSRSP+NKRER+
Sbjct: 179 RTSPDYGRRRSPSPYKKSRRGSPEYGRD--RRGNDSPRRRERVASPTKYSRSPNNKRERM 236
Query: 936 SPDRSPFKKEGLKNGDGEVDSP--RRERSRSSPENGQVESPGSIGRRDSDGGYDGADSPP 1109
SP+ SPFKKE +NG GEV+SP RRERSRSSPENGQVESPGSIGRRDSDGGYDGA+S P
Sbjct: 237 SPNHSPFKKESPRNGVGEVESPIERRERSRSSPENGQVESPGSIGRRDSDGGYDGAES-P 295
Query: 1110 MQKSRS-RSPPAEE* 1151
MQKSRS RSPPA+E*
Sbjct: 296 MQKSRSPRSPPADE* 310
>TAIR9_protein||AT5G52040.2 | Symbols: ATRSP41 | ATRSP41; RNA binding / nucleic
acid binding / nucleotide binding | chr5:21131081-21133318 FORWARD
Length = 358
Score = 492 bits (1264), Expect = 4e-139
Identities = 268/366 (73%), Positives = 289/366 (78%), Gaps = 22/366 (6%)
Frame = +3
Query: 96 MKPVFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEF 275
MKPVFCGNFEYDARE DLERLFRKYG+VERVDMKAGFAFVYMEDERDAEDAIRALDR E+
Sbjct: 1 MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60
Query: 276 GRKGRRLRVEWTKGERGGDRRSGGGGGGSRRSSS-LRPSKTLFVINFDADNTRTRGLERH 452
GR GRRLRVEWTK +RGG RS GGSRRSSS LRPSKTLFVINFDA NTRTR LERH
Sbjct: 61 GRTGRRLRVEWTKNDRGGAGRS----GGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERH 116
Query: 453 FEPYGKIVNVRIRRNFAFIQYEEQEDATRALDATNNSKLMDKVISVEYAMKDDDARGNGH 632
FEPYGKIVNVRIRRNFAFIQYE QEDATRALDATN+SKLMDKVISVEYA+KDDD+RGNG+
Sbjct: 117 FEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGY 176
Query: 633 SPERRRDRSPERRRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGR-RRSPSPYKR 809
SPERRRDRSP+RRRRSPSPY+RERGSPDYGRG SPV A+KRERTSPDYGR RRSPSPYKR
Sbjct: 177 SPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPV-AHKRERTSPDYGRGRRSPSPYKR 235
Query: 810 TRRSSPEYGRDHRHR------GNESPRRRERAASPRYSRSP---DNKRERVSPDRSPFKK 962
R SP+Y RD R R N + R R SRSP + +RE SP P++K
Sbjct: 236 A-RLSPDYKRDDRRRERVASPENGAVRNRSPRKGRGESRSPPPYEKRRESRSP--PPYEK 292
Query: 963 EGLKNGDGEVDSPR---RERSRSSPENGQVESPGSIGRRDSDGGYDGADSPPMQKSRSRS 1133
+ R R RS+SSPENGQVESPG I ++ GYDGADSP + S SRS
Sbjct: 293 RRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQIMEVEAGRGYDGADSPIRESSPSRS 352
Query: 1134 PPAEE* 1151
PPAEE*
Sbjct: 353 PPAEE* 358
>TAIR9_protein||AT5G52040.1 | Symbols: ATRSP41 | ATRSP41; RNA binding / nucleic
acid binding / nucleotide binding | chr5:21131081-21133318 FORWARD
Length = 357
Score = 489 bits (1257), Expect = 2e-138
Identities = 268/366 (73%), Positives = 291/366 (79%), Gaps = 23/366 (6%)
Frame = +3
Query: 96 MKPVFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEF 275
MKPVFCGNFEYDARE DLERLFRKYG+VERVDMKAGFAFVYMEDERDAEDAIRALDR E+
Sbjct: 1 MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60
Query: 276 GRKGRRLRVEWTKGERGGDRRSGGGGGGSRRSSS-LRPSKTLFVINFDADNTRTRGLERH 452
GR GRRLRVEWTK +RGG RS GGSRRSSS LRPSKTLFVINFDA NTRTR LERH
Sbjct: 61 GRTGRRLRVEWTKNDRGGAGRS----GGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERH 116
Query: 453 FEPYGKIVNVRIRRNFAFIQYEEQEDATRALDATNNSKLMDKVISVEYAMKDDDARGNGH 632
FEPYGKIVNVRIRRNFAFIQYE QEDATRALDATN+SKLMDKVISVEYA+KDDD+RGNG+
Sbjct: 117 FEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGY 176
Query: 633 SPERRRDRSPERRRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGR-RRSPSPYKR 809
SPERRRDRSP+RRRRSPSPY+RERGSPDYGRG SPV A+KRERTSPDYGR RRSPSPYKR
Sbjct: 177 SPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPV-AHKRERTSPDYGRGRRSPSPYKR 235
Query: 810 TRRSSPEYGRDHRHR------GNESPRRRERAASPRYSRSP---DNKRERVSPDRSPFKK 962
R SP+Y RD R R N + R R SRSP + +RE SP P++K
Sbjct: 236 A-RLSPDYKRDDRRRERVASPENGAVRNRSPRKGRGESRSPPPYEKRRESRSP--PPYEK 292
Query: 963 EGLKNGDGEVDSPR---RERSRSSPENGQVESPGSIGRRDSDGGYDGADSPPMQKSRSRS 1133
+ R R RS+SSPENGQVESPG I ++ GYDGADS P+++S SRS
Sbjct: 293 RRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQIMEVEAGRGYDGADS-PIRESPSRS 351
Query: 1134 PPAEE* 1151
PPAEE*
Sbjct: 352 PPAEE* 357
>TAIR9_protein||AT5G52040.4 | Symbols: | ATRSP41; RNA binding / nucleic acid
binding / nucleotide binding | chr5:21131881-21133318 FORWARD
Length = 325
Score = 423 bits (1085), Expect = 2e-118
Identities = 235/331 (70%), Positives = 255/331 (77%), Gaps = 22/331 (6%)
Frame = +3
Query: 201 GFAFVYMEDERDAEDAIRALDRIEFGRKGRRLRVEWTKGERGGDRRSGGGGGGSRRSSS- 377
GFAFVYMEDERDAEDAIRALDR E+GR GRRLRVEWTK +RGG RS GGSRRSSS
Sbjct: 3 GFAFVYMEDERDAEDAIRALDRFEYGRTGRRLRVEWTKNDRGGAGRS----GGSRRSSSG 58
Query: 378 LRPSKTLFVINFDADNTRTRGLERHFEPYGKIVNVRIRRNFAFIQYEEQEDATRALDATN 557
LRPSKTLFVINFDA NTRTR LERHFEPYGKIVNVRIRRNFAFIQYE QEDATRALDATN
Sbjct: 59 LRPSKTLFVINFDAQNTRTRDLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATN 118
Query: 558 NSKLMDKVISVEYAMKDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGGSP 737
+SKLMDKVISVEYA+KDDD+RGNG+SPERRRDRSP+RRRRSPSPY+RERGSPDYGRG SP
Sbjct: 119 SSKLMDKVISVEYAVKDDDSRGNGYSPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASP 178
Query: 738 VAAYKRERTSPDYGR-RRSPSPYKRTRRSSPEYGRDHRHR------GNESPRRRERAASP 896
V A+KRERTSPDYGR RRSPSPYKR R SP+Y RD R R N + R R
Sbjct: 179 V-AHKRERTSPDYGRGRRSPSPYKRA-RLSPDYKRDDRRRERVASPENGAVRNRSPRKGR 236
Query: 897 RYSRSP---DNKRERVSPDRSPFKKEGLKNGDGEVDSPR---RERSRSSPENGQVESPGS 1058
SRSP + +RE SP P++K + R R RS+SSPENGQVESPG
Sbjct: 237 GESRSPPPYEKRRESRSP--PPYEKRRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQ 294
Query: 1059 IGRRDSDGGYDGADSPPMQKSRSRSPPAEE* 1151
I ++ GYDGADSP + S SRSPPAEE*
Sbjct: 295 IMEVEAGRGYDGADSPIRESSPSRSPPAEE* 325
>TAIR9_protein||AT5G52040.3 | Symbols: | ATRSP41; RNA binding / nucleic acid
binding / nucleotide binding | chr5:21131791-21133318 FORWARD
Length = 330
Score = 418 bits (1072), Expect = 7e-117
Identities = 234/330 (70%), Positives = 256/330 (77%), Gaps = 23/330 (6%)
Frame = +3
Query: 204 FAFVYMEDERDAEDAIRALDRIEFGRKGRRLRVEWTKGERGGDRRSGGGGGGSRRSSS-L 380
FAFVYMEDERDAEDAIRALDR E+GR GRRLRVEWTK +RGG RS GGSRRSSS L
Sbjct: 10 FAFVYMEDERDAEDAIRALDRFEYGRTGRRLRVEWTKNDRGGAGRS----GGSRRSSSGL 65
Query: 381 RPSKTLFVINFDADNTRTRGLERHFEPYGKIVNVRIRRNFAFIQYEEQEDATRALDATNN 560
RPSKTLFVINFDA NTRTR LERHFEPYGKIVNVRIRRNFAFIQYE QEDATRALDATN+
Sbjct: 66 RPSKTLFVINFDAQNTRTRDLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNS 125
Query: 561 SKLMDKVISVEYAMKDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGGSPV 740
SKLMDKVISVEYA+KDDD+RGNG+SPERRRDRSP+RRRRSPSPY+RERGSPDYGRG SPV
Sbjct: 126 SKLMDKVISVEYAVKDDDSRGNGYSPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPV 185
Query: 741 AAYKRERTSPDYGR-RRSPSPYKRTRRSSPEYGRDHRHR------GNESPRRRERAASPR 899
A+KRERTSPDYGR RRSPSPYKR R SP+Y RD R R N + R R
Sbjct: 186 -AHKRERTSPDYGRGRRSPSPYKRA-RLSPDYKRDDRRRERVASPENGAVRNRSPRKGRG 243
Query: 900 YSRSP---DNKRERVSPDRSPFKKEGLKNGDGEVDSPR---RERSRSSPENGQVESPGSI 1061
SRSP + +RE SP P++K + R R RS+SSPENGQVESPG I
Sbjct: 244 ESRSPPPYEKRRESRSP--PPYEKRRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQI 301
Query: 1062 GRRDSDGGYDGADSPPMQKSRSRSPPAEE* 1151
++ GYDGADS P+++S SRSPPAEE*
Sbjct: 302 MEVEAGRGYDGADS-PIRESPSRSPPAEE* 330
>TAIR9_protein||AT3G61860.1 | Symbols: ATRSP31, RSP31 | RSP31; RNA binding /
nucleic acid binding / nucleotide binding | chr3:22900311-22902159
REVERSE
Length = 265
Score = 289 bits (737), Expect = 5e-078
Identities = 159/278 (57%), Positives = 190/278 (68%), Gaps = 27/278 (9%)
Frame = +3
Query: 96 MKPVFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEF 275
M+PVF GNFEY+ R+ DLERLF KYGRV+RVDMK+G+AFVY EDERDAEDAIR LD F
Sbjct: 1 MRPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKSGYAFVYFEDERDAEDAIRKLDNFPF 60
Query: 276 GRKGRRLRVEWTKGERGGDRRSGGGGGGSRRSSSLRPSKTLFVINFDADNTRTRGLERHF 455
G + RRL VEW KGERG R G ++ S+L+P+KTLFVINFD T+ +E+HF
Sbjct: 61 GYEKRRLSVEWAKGERGRPR------GDAKAPSNLKPTKTLFVINFDPIRTKEHDIEKHF 114
Query: 456 EPYGKIVNVRIRRNFAFIQYEEQEDATRALDATNNSKLMDKVISVEYAMKDDDARGNGHS 635
EPYGK+ NVRIRRNF+F+Q+E QEDAT+AL+AT SK++D+V+SVEYA+KDDD R
Sbjct: 115 EPYGKVTNVRIRRNFSFVQFETQEDATKALEATQRSKILDRVVSVEYALKDDDER----- 169
Query: 636 PERRRDRSPERRRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSP------S 797
+R RSP RRS SP R R SPDYGR SP + R SPDYGR RSP
Sbjct: 170 DDRNGGRSP---RRSLSPVYRRRPSPDYGRRPSP---GQGRRPSPDYGRARSPEYDRYKG 223
Query: 798 PYKRTRRSSPEYGRDHRHRGNE-SP---RRRERAASPR 899
P RR SP+YGR G + SP R R R+ PR
Sbjct: 224 PAAYERRRSPDYGRRSSDYGRQRSPGYDRYRSRSPVPR 261
>TAIR9_protein||AT2G46610.1 | Symbols: | arginine/serine-rich splicing factor,
putative | chr2:19136769-19138492 REVERSE
Length = 251
Score = 261 bits (665), Expect = 1e-069
Identities = 146/258 (56%), Positives = 174/258 (67%), Gaps = 28/258 (10%)
Frame = +3
Query: 96 MKPVFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEF 275
M+ V+ GNF+YD R DLERLF K+GRV+RVDMK+G+AFVY EDERDAEDAIR D F
Sbjct: 1 MRHVYVGNFDYDTRHSDLERLFSKFGRVKRVDMKSGYAFVYFEDERDAEDAIRRTDNTTF 60
Query: 276 GRKGRRLRVEWTK---GERGGDRRSGGGGGGSRRSSSLRPSKTLFVINFDADNTRTRGLE 446
G R+L VEW K GERG R + S+ RP+KTLFVINFD TR R +E
Sbjct: 61 GYGRRKLSVEWAKDFQGERGKPR-------DGKAVSNQRPTKTLFVINFDPIRTRERDME 113
Query: 447 RHFEPYGKIVNVRIRRNFAFIQYEEQEDATRALDATNNSKLMDKVISVEYAMKDDDARGN 626
RHFEPYGK++NVR+RRNFAF+Q+ QEDAT+ALD+T+NSKL+DKV+SVEYA+++
Sbjct: 114 RHFEPYGKVLNVRMRRNFAFVQFATQEDATKALDSTHNSKLLDKVVSVEYALRE------ 167
Query: 627 GHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGGSP-------VAAYKRERTSPDYGRR 785
+ ER + RRRRSPSP R R SPDY R SP A Y+R R SPDYGRR
Sbjct: 168 --AGEREDRYAGSRRRRSPSPVYRRRPSPDYTRRRSPEYDRYKGPAPYER-RKSPDYGRR 224
Query: 786 RSPSPYKRTRRSSPEYGR 839
S Y R R SP Y R
Sbjct: 225 --SSDYGRARARSPGYDR 240
>TAIR9_protein||AT2G46610.2 | Symbols: | arginine/serine-rich splicing factor,
putative | chr2:19136769-19137858 REVERSE
Length = 225
Score = 213 bits (541), Expect = 3e-055
Identities = 124/224 (55%), Positives = 146/224 (65%), Gaps = 28/224 (12%)
Frame = +3
Query: 198 AGFAFVYMEDERDAEDAIRALDRIEFGRKGRRLRVEWTK---GERGGDRRSGGGGGGSRR 368
AG+AFVY EDERDAEDAIR D FG R+L VEW K GERG R +
Sbjct: 9 AGYAFVYFEDERDAEDAIRRTDNTTFGYGRRKLSVEWAKDFQGERGKPR-------DGKA 61
Query: 369 SSSLRPSKTLFVINFDADNTRTRGLERHFEPYGKIVNVRIRRNFAFIQYEEQEDATRALD 548
S+ RP+KTLFVINFD TR R +ERHFEPYGK++NVR+RRNFAF+Q+ QEDAT+ALD
Sbjct: 62 VSNQRPTKTLFVINFDPIRTRERDMERHFEPYGKVLNVRMRRNFAFVQFATQEDATKALD 121
Query: 549 ATNNSKLMDKVISVEYAMKDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRG 728
+T+NSKL+DKV+SVEYA+++ + ER + RRRRSPSP R R SPDY R
Sbjct: 122 STHNSKLLDKVVSVEYALRE--------AGEREDRYAGSRRRRSPSPVYRRRPSPDYTRR 173
Query: 729 GSP-------VAAYKRERTSPDYGRRRSPSPYKRTRRSSPEYGR 839
SP A Y+R R SPDYGRR S Y R R SP Y R
Sbjct: 174 RSPEYDRYKGPAPYER-RKSPDYGRR--SSDYGRARARSPGYDR 214
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,447,042,010
Number of Sequences: 33410
Number of Extensions: 12447042010
Number of Successful Extensions: 397271338
Number of sequences better than 0.0: 0
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