BLASTX 7.6.2
Query= UN24237 /QuerySize=810
(809 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297839895|ref|XP_002887829.1| VQ motif-containing protein [Ar... 254 1e-065
gi|15220141|ref|NP_178160.1| VQ motif-containing protein [Arabid... 253 4e-065
gi|225442885|ref|XP_002263563.1| PREDICTED: hypothetical protein... 114 2e-023
>gi|297839895|ref|XP_002887829.1| VQ motif-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 180
Score = 254 bits (648), Expect = 1e-065
Identities = 131/172 (76%), Positives = 141/172 (81%), Gaps = 8/172 (4%)
Frame = +2
Query: 89 MSHKNHHSQPPSYATDPNTMFVQADPSSFRNIVQKLTGAPPELSSSSSSS--STAQHKVP 262
MSH+ H QPPSYATDPNTMFVQADPS+FRNIVQKLTGAPP++SSSSS S S A K+P
Sbjct: 1 MSHQ--HQQPPSYATDPNTMFVQADPSNFRNIVQKLTGAPPDISSSSSFSTVSAAHQKLP 58
Query: 263 LTPKRQAFKLHERRQSSKKMELKINN-NVANDSLGQFHRGFLVSPVSHLDPFW---SPQS 430
LTPK+ AFKLHERRQSSKKMELK+NN D+ FHRGFLVSPVSHLDP+W SP S
Sbjct: 59 LTPKKPAFKLHERRQSSKKMELKVNNITNPKDAFSHFHRGFLVSPVSHLDPYWARVSPHS 118
Query: 431 AREYHHATPGKEEQKAIADKGFYFLPSPRSGDEPAPELLPLFPQRNENDFCH 586
ARE HHA P KEEQKAIADKGFYFLPSPRSG EPAPELLPLFP R+ N H
Sbjct: 119 AREEHHAQPDKEEQKAIADKGFYFLPSPRSGAEPAPELLPLFPLRSPNGTTH 170
>gi|15220141|ref|NP_178160.1| VQ motif-containing protein [Arabidopsis
thaliana]
Length = 177
Score = 253 bits (644), Expect = 4e-065
Identities = 127/165 (76%), Positives = 139/165 (84%), Gaps = 5/165 (3%)
Frame = +2
Query: 107 HSQPPSYATDPNTMFVQADPSSFRNIVQKLTGAPPELSSSSSSSSTAQH-KVPLTPKRQA 283
H QPPSYAT+PNTMFVQADPS+FRNIVQKLTGAPP++SSSS S+ +A H K+PLTPK+ A
Sbjct: 3 HQQPPSYATEPNTMFVQADPSNFRNIVQKLTGAPPDISSSSFSAVSAAHQKLPLTPKKPA 62
Query: 284 FKLHERRQSSKKMELKINN-NVANDSLGQFHRGFLVSPVSHLDPFW---SPQSAREYHHA 451
FKLHERRQSSKKMELK+NN ND+ FHRGFLVSPVSHLDPFW SP SARE HHA
Sbjct: 63 FKLHERRQSSKKMELKVNNITNPNDAFSHFHRGFLVSPVSHLDPFWARVSPHSAREEHHA 122
Query: 452 TPGKEEQKAIADKGFYFLPSPRSGDEPAPELLPLFPQRNENDFCH 586
P KEEQKAIA+KGFYFLPSPRSG EPAPELLPLFP R+ N H
Sbjct: 123 QPDKEEQKAIAEKGFYFLPSPRSGSEPAPELLPLFPLRSPNGTNH 167
>gi|225442885|ref|XP_002263563.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 186
Score = 114 bits (285), Expect = 2e-023
Identities = 75/172 (43%), Positives = 100/172 (58%), Gaps = 27/172 (15%)
Frame = +2
Query: 140 NTMFVQADPSSFRNIVQKLTGAPPELSS-------SSSSSSTAQHKVPLTPKRQAFKLHE 298
NT FVQADPS+FR +VQ LTGA P+ +S + ++ + P+R FKLHE
Sbjct: 20 NTTFVQADPSNFRAVVQHLTGASPDSASPKLPVTLPTRLAAPRPTSADMGPRRPPFKLHE 79
Query: 299 RRQSSKKMELKINNNVANDSLGQF-----HRGF--------LVSPVSHLDPFWSPQSARE 439
RRQS +K+E+K+ N +A S HRGF +VSPVS L+ F SP++ R
Sbjct: 80 RRQSVRKLEIKLGNAIAPSSTAPSPSSVRHRGFVGLGGEMMMVSPVSPLELF-SPRTPR- 137
Query: 440 YHHATPGKEEQKAIADKGFYFLPSPRSGDEPA-PELLPLFPQRNENDFCHSS 592
+P +EE++AIA+KGFY PSP S + PELLPLFP + D SS
Sbjct: 138 ----SPVEEEERAIAEKGFYLHPSPLSTPRTSEPELLPLFPLHSPRDHSSSS 185
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,958,629,739,972
Number of Sequences: 15229318
Number of Extensions: 2958629739972
Number of Successful Extensions: 698572373
Number of sequences better than 0.0: 0
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