Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN24276


BLASTX 7.6.2

Query= UN24276 /QuerySize=736
        (735 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT2G29670.1 | Symbols:  | binding | chr2:12682309...    144   7e-035
TAIR9_protein||AT1G07280.1 | Symbols:  | binding | chr1:2238505-...    112   3e-025
TAIR9_protein||AT1G07280.2 | Symbols:  | binding | chr1:2238505-...    112   3e-025
TAIR9_protein||AT1G07280.3 | Symbols:  | binding | chr1:2238505-...    112   3e-025

>TAIR9_protein||AT2G29670.1 | Symbols:  | binding | chr2:12682309-12684745
        REVERSE

          Length = 537

 Score =  144 bits (362), Expect = 7e-035
 Identities = 98/177 (55%), Positives = 115/177 (64%), Gaps = 36/177 (20%)
 Frame = +2

Query: 146 MSVKVAYTSPFLQWAAHP-----SSSSQTLSSRAISTPSKRR---HNSPFHQPSSHFLPQ 301
           M VKVA +S FLQW   P     SS SQTL+S  I++PSKRR   H+  F   S  F+ Q
Sbjct:   1 MGVKVASSSTFLQWTTQPIIHQSSSPSQTLASGTITSPSKRRSTVHDGRF--LSCRFVTQ 58

Query: 302 RLNGSSLFG---TKLRRSKSCELWQ----SSKPTKT---HLVFSANLNPFSDEEFSKKIQ 451
           RLN S+LFG   TKL R KSCELW+    SS+P KT     V+SANL+PFSDEEFSKKIQ
Sbjct:  59 RLNRSALFGTPSTKLHRPKSCELWKSSSSSSRPIKTQSFRRVYSANLDPFSDEEFSKKIQ 118

Query: 452 ELTLRF---HHERES------------MDSIEMKANSVFDLPLSLRIIKKKKKRKTG 577
           ELTLRF   HH+ +             + SIEMKANSV DLPLSLRIIKKK++ + G
Sbjct: 119 ELTLRFNIPHHDDDENSIEPPWNEMVHLSSIEMKANSV-DLPLSLRIIKKKRQWEEG 174


 Score =  61 bits (146), Expect = 7e-010
 Identities = 28/44 (63%), Positives = 37/44 (84%)
 Frame = +3

Query: 570 RREEEEGGVKLSGEESSSAMSKAFSSMVFMIREIQSFTLHMREV 701
           ++ + E GVK +GE +  +M+KAFSSMVFMIRE+QSFTLHMRE+
Sbjct: 167 KKRQWEEGVKQAGESACCSMNKAFSSMVFMIRELQSFTLHMREI 210

>TAIR9_protein||AT1G07280.1 | Symbols:  | binding | chr1:2238505-2240991
        FORWARD

          Length = 553

 Score =  112 bits (279), Expect = 3e-025
 Identities = 70/132 (53%), Positives = 86/132 (65%), Gaps = 15/132 (11%)
 Frame = +2

Query: 146 MSVKVAYTSPFLQWAAHP-----SSSSQTLSSRAISTPSKRRHNSPFHQPS----SHFLP 298
           M VKVA +S F QW AHP     SS SQTL+S A+S+PS+RR      + S    S    
Sbjct:   1 MGVKVATSSTFHQWVAHPIVHHSSSLSQTLASSAVSSPSRRRIIGNDGRSSLSCRSVMQS 60

Query: 299 QRLNGSSLFG---TKLRRSKSCELWQSSKPTKTHLV---FSANLNPFSDEEFSKKIQELT 460
           QRLN SS FG   T LR SKSCELW+S+K  KT L+   FSAN++PFS+EEF+KK+QELT
Sbjct:  61 QRLNPSSPFGTSSTNLRHSKSCELWESTKRPKTQLIRRAFSANVDPFSEEEFAKKMQELT 120

Query: 461 LRFHHERESMDS 496
           L+F    E  D+
Sbjct: 121 LKFQVSNEEEDN 132


 Score =  55 bits (130), Expect = 5e-008
 Identities = 27/48 (56%), Positives = 35/48 (72%)
 Frame = +3

Query: 582 EEGGVKLSGEESSSAMSKAFSSMVFMIREIQSFTLHMREVSSTKTCEG 725
           EEG +   GE +  ++ KAFSSMVFMIRE+QSFTLHMRE+   +  +G
Sbjct: 195 EEGVLNQVGESACCSVKKAFSSMVFMIRELQSFTLHMRELLLFEDLQG 242

>TAIR9_protein||AT1G07280.2 | Symbols:  | binding | chr1:2238505-2240991
        FORWARD

          Length = 553

 Score =  112 bits (279), Expect = 3e-025
 Identities = 70/132 (53%), Positives = 86/132 (65%), Gaps = 15/132 (11%)
 Frame = +2

Query: 146 MSVKVAYTSPFLQWAAHP-----SSSSQTLSSRAISTPSKRRHNSPFHQPS----SHFLP 298
           M VKVA +S F QW AHP     SS SQTL+S A+S+PS+RR      + S    S    
Sbjct:   1 MGVKVATSSTFHQWVAHPIVHHSSSLSQTLASSAVSSPSRRRIIGNDGRSSLSCRSVMQS 60

Query: 299 QRLNGSSLFG---TKLRRSKSCELWQSSKPTKTHLV---FSANLNPFSDEEFSKKIQELT 460
           QRLN SS FG   T LR SKSCELW+S+K  KT L+   FSAN++PFS+EEF+KK+QELT
Sbjct:  61 QRLNPSSPFGTSSTNLRHSKSCELWESTKRPKTQLIRRAFSANVDPFSEEEFAKKMQELT 120

Query: 461 LRFHHERESMDS 496
           L+F    E  D+
Sbjct: 121 LKFQVSNEEEDN 132


 Score =  55 bits (130), Expect = 5e-008
 Identities = 27/48 (56%), Positives = 35/48 (72%)
 Frame = +3

Query: 582 EEGGVKLSGEESSSAMSKAFSSMVFMIREIQSFTLHMREVSSTKTCEG 725
           EEG +   GE +  ++ KAFSSMVFMIRE+QSFTLHMRE+   +  +G
Sbjct: 195 EEGVLNQVGESACCSVKKAFSSMVFMIRELQSFTLHMRELLLFEDLQG 242

>TAIR9_protein||AT1G07280.3 | Symbols:  | binding | chr1:2238505-2240991
        FORWARD

          Length = 553

 Score =  112 bits (279), Expect = 3e-025
 Identities = 70/132 (53%), Positives = 86/132 (65%), Gaps = 15/132 (11%)
 Frame = +2

Query: 146 MSVKVAYTSPFLQWAAHP-----SSSSQTLSSRAISTPSKRRHNSPFHQPS----SHFLP 298
           M VKVA +S F QW AHP     SS SQTL+S A+S+PS+RR      + S    S    
Sbjct:   1 MGVKVATSSTFHQWVAHPIVHHSSSLSQTLASSAVSSPSRRRIIGNDGRSSLSCRSVMQS 60

Query: 299 QRLNGSSLFG---TKLRRSKSCELWQSSKPTKTHLV---FSANLNPFSDEEFSKKIQELT 460
           QRLN SS FG   T LR SKSCELW+S+K  KT L+   FSAN++PFS+EEF+KK+QELT
Sbjct:  61 QRLNPSSPFGTSSTNLRHSKSCELWESTKRPKTQLIRRAFSANVDPFSEEEFAKKMQELT 120

Query: 461 LRFHHERESMDS 496
           L+F    E  D+
Sbjct: 121 LKFQVSNEEEDN 132


 Score =  55 bits (130), Expect = 5e-008
 Identities = 27/48 (56%), Positives = 35/48 (72%)
 Frame = +3

Query: 582 EEGGVKLSGEESSSAMSKAFSSMVFMIREIQSFTLHMREVSSTKTCEG 725
           EEG +   GE +  ++ KAFSSMVFMIRE+QSFTLHMRE+   +  +G
Sbjct: 195 EEGVLNQVGESACCSVKKAFSSMVFMIRELQSFTLHMRELLLFEDLQG 242

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,489,607,285
Number of Sequences: 33410
Number of Extensions: 12489607285
Number of Successful Extensions: 397281130
Number of sequences better than 0.0: 0