BLASTX 7.6.2
Query= UN24299 /QuerySize=1695
(1694 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G27700.1 | Symbols: | RNA recognition motif (... 622 2e-178
TAIR9_protein||AT3G27700.2 | Symbols: | RNA recognition motif (... 622 2e-178
>TAIR9_protein||AT3G27700.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:10257681-10261330 REVERSE
Length = 909
Score = 622 bits (1603), Expect = 2e-178
Identities = 335/423 (79%), Positives = 366/423 (86%), Gaps = 11/423 (2%)
Frame = +3
Query: 3 ESALRAPDAVMGNRFIKLWWANRDSIPDNGLSTGNGASVNGRVMAASGRQNQLAIAAASK 182
ESALRAPDAVMGNRFIKLWWANRDSIPDNGLSTG+GAS+ GR M ASG QNQ IAAASK
Sbjct: 488 ESALRAPDAVMGNRFIKLWWANRDSIPDNGLSTGSGASMKGRSMTASGAQNQFPIAAASK 547
Query: 183 SNHVTSTAKGPAFRAGGAPSSSEQPKPVGV-TSGPKVTPLQQRKADDLERLKETLRKKQE 359
SNHV+S AK P F+ GGAPSSSEQPKPV V TSGPKVTPLQQ+KAD LERLKETLRKKQE
Sbjct: 548 SNHVSSIAKVPTFQTGGAPSSSEQPKPVVVTTSGPKVTPLQQKKADTLERLKETLRKKQE 607
Query: 360 MLEQKREEFRKKLAKLEK-GTVVKGEEADEPDAKRVKVDTASNSDAATSSPKTVSSTDKK 536
MLEQKR E+RKKLA LEK GTVVK EEADEPDAKRVK+DTAS+S AA +SPKT SSTD K
Sbjct: 608 MLEQKRNEYRKKLATLEKQGTVVKREEADEPDAKRVKLDTASDSGAAIASPKTESSTD-K 666
Query: 537 KVPIQKPLYSAKISTETPSPDPQKHLKQRPYPFTTSLNTPMVNRYKLDNRPTTIKVVPPL 716
KVPI KPL +AK+STETPSPD K+ KQRPY FTTSLN PMVNRYKLDNR TTIKVVPPL
Sbjct: 667 KVPILKPLSTAKLSTETPSPD-SKNFKQRPYSFTTSLNAPMVNRYKLDNRTTTIKVVPPL 725
Query: 717 PTGLADVAVLKEHFSSYGEVSKVELEEDASTDGGKDQDETDKENRNRAACITFVKRSAAE 896
PTGLADVAV+KEHFSSYGEVSKVELE++AS D GKD + +N +RAAC+TFVKRSAAE
Sbjct: 726 PTGLADVAVVKEHFSSYGEVSKVELEDNASIDSGKDH---ETQNESRAACVTFVKRSAAE 782
Query: 897 KAFANAKCWQENTLQLKWVTRQSNREKNSSSNNNNNHLSVTGDHLSSKNKCTASVSNDPK 1076
KAFANAKCWQE+TLQL WVTRQSNRE N ++NNN+N LSV+ D+LSSKNKC ASVSNDPK
Sbjct: 783 KAFANAKCWQEHTLQLVWVTRQSNRESN-NNNNNSNSLSVSRDNLSSKNKC-ASVSNDPK 840
Query: 1077 PKDEQVKASSTEESGNTNVSGD-DKTLDERETKESDNGNNKSNSESVEGASEAVAVSEAD 1253
P E VK SSTEE NTNVSGD D TLD++ETKESDN NNKSN ES+EGASE +A + D
Sbjct: 841 PAVE-VKTSSTEEPENTNVSGDNDSTLDKQETKESDNDNNKSNHESIEGASEVIATAGTD 899
Query: 1254 EKQ 1262
E+Q
Sbjct: 900 EEQ 902
>TAIR9_protein||AT3G27700.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:10257681-10261330 REVERSE
Length = 909
Score = 622 bits (1603), Expect = 2e-178
Identities = 335/423 (79%), Positives = 366/423 (86%), Gaps = 11/423 (2%)
Frame = +3
Query: 3 ESALRAPDAVMGNRFIKLWWANRDSIPDNGLSTGNGASVNGRVMAASGRQNQLAIAAASK 182
ESALRAPDAVMGNRFIKLWWANRDSIPDNGLSTG+GAS+ GR M ASG QNQ IAAASK
Sbjct: 488 ESALRAPDAVMGNRFIKLWWANRDSIPDNGLSTGSGASMKGRSMTASGAQNQFPIAAASK 547
Query: 183 SNHVTSTAKGPAFRAGGAPSSSEQPKPVGV-TSGPKVTPLQQRKADDLERLKETLRKKQE 359
SNHV+S AK P F+ GGAPSSSEQPKPV V TSGPKVTPLQQ+KAD LERLKETLRKKQE
Sbjct: 548 SNHVSSIAKVPTFQTGGAPSSSEQPKPVVVTTSGPKVTPLQQKKADTLERLKETLRKKQE 607
Query: 360 MLEQKREEFRKKLAKLEK-GTVVKGEEADEPDAKRVKVDTASNSDAATSSPKTVSSTDKK 536
MLEQKR E+RKKLA LEK GTVVK EEADEPDAKRVK+DTAS+S AA +SPKT SSTD K
Sbjct: 608 MLEQKRNEYRKKLATLEKQGTVVKREEADEPDAKRVKLDTASDSGAAIASPKTESSTD-K 666
Query: 537 KVPIQKPLYSAKISTETPSPDPQKHLKQRPYPFTTSLNTPMVNRYKLDNRPTTIKVVPPL 716
KVPI KPL +AK+STETPSPD K+ KQRPY FTTSLN PMVNRYKLDNR TTIKVVPPL
Sbjct: 667 KVPILKPLSTAKLSTETPSPD-SKNFKQRPYSFTTSLNAPMVNRYKLDNRTTTIKVVPPL 725
Query: 717 PTGLADVAVLKEHFSSYGEVSKVELEEDASTDGGKDQDETDKENRNRAACITFVKRSAAE 896
PTGLADVAV+KEHFSSYGEVSKVELE++AS D GKD + +N +RAAC+TFVKRSAAE
Sbjct: 726 PTGLADVAVVKEHFSSYGEVSKVELEDNASIDSGKDH---ETQNESRAACVTFVKRSAAE 782
Query: 897 KAFANAKCWQENTLQLKWVTRQSNREKNSSSNNNNNHLSVTGDHLSSKNKCTASVSNDPK 1076
KAFANAKCWQE+TLQL WVTRQSNRE N ++NNN+N LSV+ D+LSSKNKC ASVSNDPK
Sbjct: 783 KAFANAKCWQEHTLQLVWVTRQSNRESN-NNNNNSNSLSVSRDNLSSKNKC-ASVSNDPK 840
Query: 1077 PKDEQVKASSTEESGNTNVSGD-DKTLDERETKESDNGNNKSNSESVEGASEAVAVSEAD 1253
P E VK SSTEE NTNVSGD D TLD++ETKESDN NNKSN ES+EGASE +A + D
Sbjct: 841 PAVE-VKTSSTEEPENTNVSGDNDSTLDKQETKESDNDNNKSNHESIEGASEVIATAGTD 899
Query: 1254 EKQ 1262
E+Q
Sbjct: 900 EEQ 902
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,489,607,285
Number of Sequences: 33410
Number of Extensions: 12489607285
Number of Successful Extensions: 397281130
Number of sequences better than 0.0: 0
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