BLASTX 7.6.2
Query= UN24360 /QuerySize=627
(626 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G19000.1 | Symbols: | FUNCTIONS IN: molecular... 163 1e-040
TAIR9_protein||AT4G21620.1 | Symbols: | glycine-rich protein | ... 80 9e-016
>TAIR9_protein||AT2G19000.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED
DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C
globular stage, petal differentiation and expansion stage; BEST
Arabidopsis thaliana protein match is: glycine-rich protein
(TAIR:AT4G21620.1); Has 49 Blast hits to 49 proteins in 7 species:
Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 47; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:8241189-8241566
FORWARD
Length = 126
Score = 163 bits (410), Expect = 1e-040
Identities = 83/128 (64%), Positives = 90/128 (70%), Gaps = 6/128 (4%)
Frame = +1
Query: 52 KYILLPFLLLIIFVSSSQASRQLWDSEFHDFF-SKSGFHGINKVHGIHGFHGFHHGTHGI 228
K ILLPFLL+IIFVS+SQASRQLWDS + F SKSGFH HG GF G G G
Sbjct: 4 KSILLPFLLVIIFVSASQASRQLWDSGISEMFGSKSGFH-----HGFSGFSGSSGGAGGA 58
Query: 229 SKFPGTGSFISGEQTCSMQGPCKGKKLKCPETCYKSTNVNKEGYKSTSKSGGCSFDCTTK 408
G G TCS QG C GKKL CPE CYKSTNVNK+GYKSTS+SGGCSFDCTTK
Sbjct: 59 GGSFGDMMNAGGAHTCSAQGACSGKKLTCPEECYKSTNVNKDGYKSTSRSGGCSFDCTTK 118
Query: 409 CSATCSS* 432
C+ATCS+*
Sbjct: 119 CAATCSN* 126
>TAIR9_protein||AT4G21620.1 | Symbols: | glycine-rich protein |
chr4:11491519-11491914 FORWARD
Length = 132
Score = 80 bits (196), Expect = 9e-016
Identities = 49/131 (37%), Positives = 67/131 (51%), Gaps = 10/131 (7%)
Frame = +1
Query: 52 KYILLPFLLLIIFVSSSQASRQLWDSEFHDFFSKSGFHGINKVHGI-HGF------HGFH 210
K ILL LL+II VS+++++RQ +D G G + G +GF G+
Sbjct: 4 KSILLASLLIIILVSATESARQ---KSGNDGLGFGGVPGSGFIPGFGNGFPGTGVGGGYG 60
Query: 211 HGTHGISKFPGTGSFISGEQTCSMQGPCKGKKLKCPETCYKSTNVNKEGYKSTSKSGGCS 390
G G S G G + TC +GPC GKKL+CP C+KS + + +GY GGC+
Sbjct: 61 GGFGGPSGGFGKGGVVRPTVTCKEKGPCNGKKLRCPAKCFKSFSRSGKGYGGGGGGGGCT 120
Query: 391 FDCTTKCSATC 423
DC KC A C
Sbjct: 121 MDCKKKCIAYC 131
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,489,607,285
Number of Sequences: 33410
Number of Extensions: 12489607285
Number of Successful Extensions: 397281130
Number of sequences better than 0.0: 0
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