BLASTX 7.6.2
Query= UN24370 /QuerySize=930
(929 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q94BR4|PR19A_ARATH Pre-mRNA-processing factor 19 homolog 1 OS... 411 4e-114
sp|O22785|PR19B_ARATH Pre-mRNA-processing factor 19 homolog 2 OS... 372 2e-102
sp|Q5ZMA2|PRP19_CHICK Pre-mRNA-processing factor 19 OS=Gallus ga... 181 6e-045
sp|Q08E38|PRP19_BOVIN Pre-mRNA-processing factor 19 OS=Bos tauru... 181 7e-045
sp|Q9UMS4|PRP19_HUMAN Pre-mRNA-processing factor 19 OS=Homo sapi... 181 7e-045
sp|Q99KP6|PRP19_MOUSE Pre-mRNA-processing factor 19 OS=Mus muscu... 181 7e-045
sp|Q9JMJ4|PRP19_RAT Pre-mRNA-processing factor 19 OS=Rattus norv... 181 7e-045
sp|Q10051|PRP19_CAEEL Pre-mRNA-processing factor 19 homolog OS=C... 166 2e-040
sp|Q7KWK5|PRP19_DICDI Pre-mRNA-processing factor 19 homolog OS=D... 112 6e-024
sp|Q8YRI1|YY46_ANASP Uncharacterized WD repeat-containing protei... 91 1e-017
sp|Q9UTC7|YIDC_SCHPO Uncharacterized WD repeat-containing protei... 87 1e-016
sp|Q00808|HETE1_PODAN Vegetative incompatibility protein HET-E-1... 83 3e-015
sp|Q8YTC2|Y2800_ANASP Uncharacterized WD repeat-containing prote... 79 4e-014
sp|P93107|PF20_CHLRE Flagellar WD repeat-containing protein Pf20... 72 4e-012
sp|Q9BVA0|KTNB1_HUMAN Katanin p80 WD40-containing subunit B1 OS=... 67 2e-010
sp|Q8BG40|KTNB1_MOUSE Katanin p80 WD40-containing subunit B1 OS=... 67 2e-010
sp|Q15542|TAF5_HUMAN Transcription initiation factor TFIID subun... 64 1e-009
sp|Q8C092|TAF5_MOUSE Transcription initiation factor TFIID subun... 63 2e-009
>sp|Q94BR4|PR19A_ARATH Pre-mRNA-processing factor 19 homolog 1 OS=Arabidopsis
thaliana GN=PRP19A PE=1 SV=1
Length = 523
Score = 411 bits (1055), Expect = 4e-114
Identities = 201/222 (90%), Positives = 214/222 (96%), Gaps = 1/222 (0%)
Frame = -1
Query: 929 KHTLKDHTAEVRAVTVHATNKYFVSASLDSTWCFYDMSSGLCLAQVTDDSEK-VDYTAAA 753
+HTLKDH+AEVRAVTVHATNKYFVSASLDSTWCFYD+SSGLCLAQVTD SE V+YTAAA
Sbjct: 302 RHTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAA 361
Query: 752 FHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHTGEITSVSFSENGYFLATSALDGVRL 573
FHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGH GEITS+SFSENGYFLAT+ALDGVRL
Sbjct: 362 FHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALDGVRL 421
Query: 572 WDLRKLKNFRTFDFPNANSVEFDHSGSYLGIAASDIRVFQTASVKAEWNPVKTLPDLSGT 393
WDLRKLKNFRTFDFP+ANSVEFDHSGSYLGIAASDIRVFQ ASVKAEWNP+KTLPDLSGT
Sbjct: 422 WDLRKLKNFRTFDFPDANSVEFDHSGSYLGIAASDIRVFQAASVKAEWNPIKTLPDLSGT 481
Query: 392 GRATCVKFGPDAKYVAVGSMDRNLRIFGLPSNDSTEDSAQDS 267
G+AT VKFG D+KY+AVGSMDRNLRIFGLP +D+TEDSAQDS
Sbjct: 482 GKATSVKFGLDSKYIAVGSMDRNLRIFGLPDDDNTEDSAQDS 523
>sp|O22785|PR19B_ARATH Pre-mRNA-processing factor 19 homolog 2 OS=Arabidopsis
thaliana GN=PRP19B PE=1 SV=3
Length = 525
Score = 372 bits (955), Expect = 2e-102
Identities = 181/223 (81%), Positives = 204/223 (91%), Gaps = 3/223 (1%)
Frame = -1
Query: 926 HTLKDHTAEVRAVTVHATNKYFVSASLDSTWCFYDMSSGLCLAQVTDDSEKVDYTAAAFH 747
+TL DH+AEVRAVTVH TNKYFVSASLD TWCFYD+SSG CLAQV+DDS+ VDYTAAAFH
Sbjct: 303 YTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFH 362
Query: 746 PDGLILGTGTAQSIVKIWDVKSQANVAKFGGHTGEITSVSFSENGYFLATSALDGVRLWD 567
PDGLILGTGT+QS+VKIWDVKSQANVAKF GHTGE+T++SFSENGYFLAT+A DGVRLWD
Sbjct: 363 PDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGVRLWD 422
Query: 566 LRKLKNFRTFDFPNANSVEFDHSGSYLGIAASDIRVFQTASVKAEWNPVKTLPDLSGTGR 387
LRKL+NF++F +ANSVEFD SGSYLGIAASDI+V+QTASVKAEWN +KTLPDLSGTG+
Sbjct: 423 LRKLRNFKSFLSADANSVEFDPSGSYLGIAASDIKVYQTASVKAEWNLIKTLPDLSGTGK 482
Query: 386 ATCVKFGPDAKYVAVGSMDRNLRIFGLPSNDST---EDSAQDS 267
ATCVKFG DA+YVAVGSMDRNLRIFGLP ++ +DSAQDS
Sbjct: 483 ATCVKFGSDAQYVAVGSMDRNLRIFGLPGDEKANVDDDSAQDS 525
>sp|Q5ZMA2|PRP19_CHICK Pre-mRNA-processing factor 19 OS=Gallus gallus GN=PRPF19
PE=1 SV=1
Length = 505
Score = 181 bits (459), Expect = 6e-045
Identities = 93/207 (44%), Positives = 131/207 (63%), Gaps = 10/207 (4%)
Frame = -1
Query: 920 LKDHTAEVRAVTVHATNKYFVSASLDSTWCFYDMSSGLCLAQVTDDSEKVDYTAAAFHPD 741
++ H V +++HAT Y +S+S D W F D+ +G L +VTD+S T A FHPD
Sbjct: 303 VRAHEGSVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDESSGCALTCAQFHPD 362
Query: 740 GLILGTGTAQSIVKIWDVKSQANVAKFGGHTGEITSVSFSENGYFLATSALD-GVRLWDL 564
GLI GTGT S +KIWD+K + NVA F GH+G ITS++FSENGY+LAT+A D V+LWDL
Sbjct: 363 GLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDL 422
Query: 563 RKLKNFRTFDFPN---ANSVEFDHSGSYLGIAASDIRVFQTASVKAEWNPVKTLPDLSGT 393
RKLKNF+T N S+ FD SG+YL + +D++++ + +W + + SG
Sbjct: 423 RKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIY----ICKQWTEILHFTEHSGL 478
Query: 392 GRATCVKFGPDAKYVAVGSMDRNLRIF 312
T V FG AK++A MDR+L+ +
Sbjct: 479 --TTGVAFGHHAKFIASTGMDRSLKFY 503
>sp|Q08E38|PRP19_BOVIN Pre-mRNA-processing factor 19 OS=Bos taurus GN=PRPF19
PE=2 SV=1
Length = 504
Score = 181 bits (458), Expect = 7e-045
Identities = 92/207 (44%), Positives = 132/207 (63%), Gaps = 10/207 (4%)
Frame = -1
Query: 920 LKDHTAEVRAVTVHATNKYFVSASLDSTWCFYDMSSGLCLAQVTDDSEKVDYTAAAFHPD 741
++ H + V +++HAT Y +S+S D W F D+ +G L +VTD++ T A FHPD
Sbjct: 302 VRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPD 361
Query: 740 GLILGTGTAQSIVKIWDVKSQANVAKFGGHTGEITSVSFSENGYFLATSALD-GVRLWDL 564
GLI GTGT S +KIWD+K + NVA F GH+G ITS++FSENGY+LAT+A D V+LWDL
Sbjct: 362 GLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDL 421
Query: 563 RKLKNFRTFDFPN---ANSVEFDHSGSYLGIAASDIRVFQTASVKAEWNPVKTLPDLSGT 393
RKLKNF+T N S+ FD SG+YL + +D++++ + +W + + SG
Sbjct: 422 RKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIY----ICKQWTEILHFTEHSGL 477
Query: 392 GRATCVKFGPDAKYVAVGSMDRNLRIF 312
T V FG AK++A MDR+L+ +
Sbjct: 478 --TTGVAFGHHAKFIASTGMDRSLKFY 502
>sp|Q9UMS4|PRP19_HUMAN Pre-mRNA-processing factor 19 OS=Homo sapiens GN=PRPF19
PE=1 SV=1
Length = 504
Score = 181 bits (458), Expect = 7e-045
Identities = 92/207 (44%), Positives = 132/207 (63%), Gaps = 10/207 (4%)
Frame = -1
Query: 920 LKDHTAEVRAVTVHATNKYFVSASLDSTWCFYDMSSGLCLAQVTDDSEKVDYTAAAFHPD 741
++ H + V +++HAT Y +S+S D W F D+ +G L +VTD++ T A FHPD
Sbjct: 302 VRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPD 361
Query: 740 GLILGTGTAQSIVKIWDVKSQANVAKFGGHTGEITSVSFSENGYFLATSALD-GVRLWDL 564
GLI GTGT S +KIWD+K + NVA F GH+G ITS++FSENGY+LAT+A D V+LWDL
Sbjct: 362 GLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDL 421
Query: 563 RKLKNFRTFDFPN---ANSVEFDHSGSYLGIAASDIRVFQTASVKAEWNPVKTLPDLSGT 393
RKLKNF+T N S+ FD SG+YL + +D++++ + +W + + SG
Sbjct: 422 RKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIY----ICKQWTEILHFTEHSGL 477
Query: 392 GRATCVKFGPDAKYVAVGSMDRNLRIF 312
T V FG AK++A MDR+L+ +
Sbjct: 478 --TTGVAFGHHAKFIASTGMDRSLKFY 502
>sp|Q99KP6|PRP19_MOUSE Pre-mRNA-processing factor 19 OS=Mus musculus GN=Prpf19
PE=2 SV=1
Length = 504
Score = 181 bits (458), Expect = 7e-045
Identities = 92/207 (44%), Positives = 132/207 (63%), Gaps = 10/207 (4%)
Frame = -1
Query: 920 LKDHTAEVRAVTVHATNKYFVSASLDSTWCFYDMSSGLCLAQVTDDSEKVDYTAAAFHPD 741
++ H + V +++HAT Y +S+S D W F D+ +G L +VTD++ T A FHPD
Sbjct: 302 VRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPD 361
Query: 740 GLILGTGTAQSIVKIWDVKSQANVAKFGGHTGEITSVSFSENGYFLATSALD-GVRLWDL 564
GLI GTGT S +KIWD+K + NVA F GH+G ITS++FSENGY+LAT+A D V+LWDL
Sbjct: 362 GLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDL 421
Query: 563 RKLKNFRTFDFPN---ANSVEFDHSGSYLGIAASDIRVFQTASVKAEWNPVKTLPDLSGT 393
RKLKNF+T N S+ FD SG+YL + +D++++ + +W + + SG
Sbjct: 422 RKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIY----ICKQWTEILHFTEHSGL 477
Query: 392 GRATCVKFGPDAKYVAVGSMDRNLRIF 312
T V FG AK++A MDR+L+ +
Sbjct: 478 --TTGVAFGHHAKFIASTGMDRSLKFY 502
>sp|Q9JMJ4|PRP19_RAT Pre-mRNA-processing factor 19 OS=Rattus norvegicus
GN=Prpf19 PE=2 SV=2
Length = 504
Score = 181 bits (458), Expect = 7e-045
Identities = 92/207 (44%), Positives = 132/207 (63%), Gaps = 10/207 (4%)
Frame = -1
Query: 920 LKDHTAEVRAVTVHATNKYFVSASLDSTWCFYDMSSGLCLAQVTDDSEKVDYTAAAFHPD 741
++ H + V +++HAT Y +S+S D W F D+ +G L +VTD++ T A FHPD
Sbjct: 302 VRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPD 361
Query: 740 GLILGTGTAQSIVKIWDVKSQANVAKFGGHTGEITSVSFSENGYFLATSALD-GVRLWDL 564
GLI GTGT S +KIWD+K + NVA F GH+G ITS++FSENGY+LAT+A D V+LWDL
Sbjct: 362 GLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDL 421
Query: 563 RKLKNFRTFDFPN---ANSVEFDHSGSYLGIAASDIRVFQTASVKAEWNPVKTLPDLSGT 393
RKLKNF+T N S+ FD SG+YL + +D++++ + +W + + SG
Sbjct: 422 RKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIY----ICKQWTEILHFTEHSGL 477
Query: 392 GRATCVKFGPDAKYVAVGSMDRNLRIF 312
T V FG AK++A MDR+L+ +
Sbjct: 478 --TTGVAFGHHAKFIASTGMDRSLKFY 502
>sp|Q10051|PRP19_CAEEL Pre-mRNA-processing factor 19 homolog OS=Caenorhabditis
elegans GN=T10F2.4 PE=2 SV=2
Length = 492
Score = 166 bits (420), Expect = 2e-040
Identities = 90/205 (43%), Positives = 131/205 (63%), Gaps = 11/205 (5%)
Frame = -1
Query: 911 HTAEVRAVTVHATNKYFVSASLDSTWCFYDMSSGLCLAQVT-DDSEKVDYTAAAFHPDGL 735
H A V ++++A+ Y +SAS DS W F D+ SG L +V+ + ++ + FHPDGL
Sbjct: 292 HQAPVTDISLNASGDYILSASDDSYWAFSDIRSGKSLCKVSVEPGSQIAVHSIEFHPDGL 351
Query: 734 ILGTGTAQSIVKIWDVKSQANVAKFGGHTGEITSVSFSENGYFLATSALDG-VRLWDLRK 558
I GTG A ++VKIWD+K+Q A F GHT + S++FSENGY+LAT + DG V+LWDLRK
Sbjct: 352 IFGTGAADAVVKIWDLKNQTVAAAFPGHTAAVRSIAFSENGYYLATGSEDGEVKLWDLRK 411
Query: 557 LKNFRTF---DFPNANSVEFDHSGSYLGIAASDIRVFQTASVKAEWNPVKTLPDLSGTGR 387
LKN +TF + NS+ FD +G++LGI ++V S W+ V +L D SG
Sbjct: 412 LKNLKTFANEEKQPINSLSFDMTGTFLGIGGQKVQVLHVKS----WSEVVSLSDHSGP-- 465
Query: 386 ATCVKFGPDAKYVAVGSMDRNLRIF 312
T V+FG +A+ + S+D++LR+F
Sbjct: 466 VTGVRFGENARSLVTCSLDKSLRVF 490
>sp|Q7KWK5|PRP19_DICDI Pre-mRNA-processing factor 19 homolog OS=Dictyostelium
discoideum GN=prp19 PE=3 SV=1
Length = 514
Score = 112 bits (278), Expect = 6e-024
Identities = 66/208 (31%), Positives = 110/208 (52%), Gaps = 18/208 (8%)
Frame = -1
Query: 911 HTAEVRAVTVHATNKYFVSASLDSTWCFYDMSSGLCLAQVTDDSEKVDYTAAAFHPDGLI 732
H A V +++H Y +S+SLD + YD+ +G L S+++ YT+ AFHPDG+
Sbjct: 308 HKASVTDISLHVLGDYIISSSLDKSLNMYDIVNGTHLTSF-GQSQQLCYTSVAFHPDGMF 366
Query: 731 LGTGTAQSIVKIWDVKSQANVAKFGGHTGEITSVSFSENGYFLATSALDGVRLWDLRKLK 552
GT +VKI+D+KS+ N F G + + +SFSENGY+L + + V+L+DLRK
Sbjct: 367 FAAGTQNGVVKIFDLKSKVNSFNFQGLSTAVNCISFSENGYYLTAADNNTVKLFDLRKAA 426
Query: 551 NFR-------TFDFPNANSVEFDHSGSYLGIAASD-IRVFQTASVKAEWNPVKTLPDLSG 396
T D S+ FD+S YLG+A+S+ I ++ S + P+ ++ +
Sbjct: 427 TKNSPDIQTITLDNQQIKSINFDYSSQYLGVASSNQINLYSCKSKQKP--PISSIHSID- 483
Query: 395 TGRATCVKF---GPDAKYVAVGSMDRNL 321
+ C+ F P++ + S +N+
Sbjct: 484 ---SDCLDFKWARPNSNFFVTSSSSKNI 508
>sp|Q8YRI1|YY46_ANASP Uncharacterized WD repeat-containing protein alr3466
OS=Anabaena sp. (strain PCC 7120) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 91 bits (223), Expect = 1e-017
Identities = 68/218 (31%), Positives = 108/218 (49%), Gaps = 19/218 (8%)
Frame = -1
Query: 923 TLKDHTAEVRAVTVHATNKYFVSASLDSTWCFYDMSSGLCLAQVTDDSEKVDYTAAAFHP 744
T K H + V +V K S S D T +D+SSG CL + +V + F P
Sbjct: 901 TCKGHNSWVNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGHTSRV--RSVVFSP 958
Query: 743 DGLILGTGTAQSIVKIWDVKSQANVAKFGGHTGEITSVSFSENGYFLATSALD-GVRLWD 567
+ L+L +G++ V++WD+ S + F GHTG + SV+F+ +G LAT + D VRLWD
Sbjct: 959 NSLMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWD 1018
Query: 566 LRKLKNFRTFDFPNA--NSVEFDHSGSYLGIAASD--IRVFQTASVKAEWNPVKTLPDLS 399
+ + F F + SV F G+ L + D +R++ +S N + TL
Sbjct: 1019 ISSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISS----GNCLYTL---- 1070
Query: 398 GTGRATCVK---FGPDAKYVAVGSMDRNLRIFGLPSND 294
G +CV+ F PD +A G D+ +R++ + S +
Sbjct: 1071 -QGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGN 1107
>sp|Q9UTC7|YIDC_SCHPO Uncharacterized WD repeat-containing protein C227.12
OS=Schizosaccharomyces pombe GN=SPAC227.12 PE=2 SV=1
Length = 462
Score = 87 bits (214), Expect = 1e-016
Identities = 58/170 (34%), Positives = 90/170 (52%), Gaps = 10/170 (5%)
Frame = -1
Query: 920 LKDHTAEVRAVTVHATNKYFVSASLDSTWCFYDMSSGLCLAQVTDDSEKVDYTAAAFHPD 741
L+ H A V V H + Y VSAS D+TW +D+ +G+ L SE + + A PD
Sbjct: 261 LEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGI--FSIACQPD 318
Query: 740 GLILGTGTAQSIVKIWDVKSQANVAKFGGHTGEITSVSFSENGYFLATSALDG-VRLWDL 564
G ++ +G +I +IWD++S ++ H +I ++++S NGY LATS+ D V++WDL
Sbjct: 319 GSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDL 378
Query: 563 RKLKNFRTFDFPNA--NSVEFDHSGSYLGIAASDIRVFQTASVKAEWNPV 420
RK+ T ++ + V + SG IA S VK WNP+
Sbjct: 379 RKVSLAHTIPAHSSLVSDVRYIESGVNRFIATSG----YDGCVKL-WNPL 423
>sp|Q00808|HETE1_PODAN Vegetative incompatibility protein HET-E-1 OS=Podospora
anserina GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 83 bits (203), Expect = 3e-015
Identities = 64/218 (29%), Positives = 101/218 (46%), Gaps = 13/218 (5%)
Frame = -1
Query: 923 TLKDHTAEVRAVTVHATNKYFVSASLDSTWCFYDMSSGLCLAQVTDDSEKVDYTAAAFHP 744
TL+ H V++V + S S D T +D SG C + + V + AF P
Sbjct: 1046 TLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSV--WSVAFSP 1103
Query: 743 DGLILGTGTAQSIVKIWDVKSQANVAKFGGHTGEITSVSFSENGYFLATSALDG-VRLWD 567
DG + +G+ +KIWD S GH G + SV+FS +G +A+ ++DG +++WD
Sbjct: 1104 DGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWD 1163
Query: 566 LRKLKNFRTFDFPN--ANSVEFDHSGSYLGIAASD--IRVFQTASVKAEWNPVKTLPDLS 399
+T + SV F G + +SD I+++ TAS +TL
Sbjct: 1164 AASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDKTIKIWDTASGTC----TQTLEGHG 1219
Query: 398 GTGRATCVKFGPDAKYVAVGSMDRNLRIFGLPSNDSTE 285
G ++ V F PD + VA GS D ++I+ S T+
Sbjct: 1220 GWVQS--VAFSPDGQRVASGSSDNTIKIWDTASGTCTQ 1255
Score = 75 bits (183), Expect = 6e-013
Identities = 61/219 (27%), Positives = 95/219 (43%), Gaps = 15/219 (6%)
Frame = -1
Query: 923 TLKDHTAEVRAVTVHATNKYFVSASLDSTWCFYDMSSGLCLAQVTDDSEKVDYTAAAFHP 744
TL+ H V++V + S S D T +D +SG C + V + AF P
Sbjct: 920 TLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQTLEGHGSSV--LSVAFSP 977
Query: 743 DGLILGTGTAQSIVKIWDVKSQANVAKFGGHTGEITSVSFSENGYFLATSALD-GVRLWD 567
DG + +G+ +KIWD S GH G + SV+FS +G +A+ + D +++WD
Sbjct: 978 DGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWD 1037
Query: 566 LRKLKNFRTFDFPN--ANSVEFDHSGSYLGIAASDIRVFQTASVKAEWNPVK--TLPDLS 399
+T + SV F G + + D T + W+ V L
Sbjct: 1038 TASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDD----HTIKI---WDAVSGTCTQTLE 1090
Query: 398 GTGRAT-CVKFGPDAKYVAVGSMDRNLRIFGLPSNDSTE 285
G G + V F PD + VA GS+D ++I+ S T+
Sbjct: 1091 GHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQ 1129
Score = 69 bits (166), Expect = 5e-011
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 4/157 (2%)
Frame = -1
Query: 923 TLKDHTAEVRAVTVHATNKYFVSASLDSTWCFYDMSSGLCLAQVTDDSEKVDYTAAAFHP 744
TL+ H V +V + S S+D T +D +SG C + V + AF P
Sbjct: 1130 TLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQ--SVAFSP 1187
Query: 743 DGLILGTGTAQSIVKIWDVKSQANVAKFGGHTGEITSVSFSENGYFLATSALDG-VRLWD 567
DG + +G++ +KIWD S GH G + SV+FS +G +A+ + D +++WD
Sbjct: 1188 DGQRVASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDNTIKIWD 1247
Query: 566 LRKLKNFRTFDF-PNANSVEFDHSGSYLGIAASDIRV 459
+T + A + FD++ +Y+ I++
Sbjct: 1248 TASGTCTQTLNVGSTATCLSFDYTNAYINTNIGRIQI 1284
>sp|Q8YTC2|Y2800_ANASP Uncharacterized WD repeat-containing protein alr2800
OS=Anabaena sp. (strain PCC 7120) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 79 bits (193), Expect = 4e-014
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 19/210 (9%)
Frame = -1
Query: 917 KDHTAEVRAVTVHATNKYFVSASLDSTWCFYDMSSGLCLAQVTDDSEKVDYTAAAFHPDG 738
+ H+ VR V + S D + + G+C+ +T +V + AFHPDG
Sbjct: 681 RGHSNWVRFVVFSPDGEILASCGADENVKLWSVRDGVCIKTLTGHEHEV--FSVAFHPDG 738
Query: 737 LILGTGTAQSIVKIWDVKSQANVAKFGGHTGEITSVSFSENGYFLATSALD-GVRLWDLR 561
L + + +K+WD++ + GHT + V+FS +G LA+SA D ++LWD+
Sbjct: 739 ETLASASGDKTIKLWDIQDGTCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVS 798
Query: 560 KLKNFRTFDFPN--ANSVEFDHSGSYLGIAASDIRVFQTASVKAEWN-----PVKTLPDL 402
+ K RT SV F G L + D +T + WN +KT +
Sbjct: 799 QGKCLRTLKSHTGWVRSVAFSADGQTLASGSGD----RTIKI---WNYHTGECLKTY--I 849
Query: 401 SGTGRATCVKFGPDAKYVAVGSMDRNLRIF 312
T + + PD+K + GS DR ++++
Sbjct: 850 GHTNSVYSIAYSPDSKILVSGSGDRTIKLW 879
>sp|P93107|PF20_CHLRE Flagellar WD repeat-containing protein Pf20
OS=Chlamydomonas reinhardtii GN=PF20 PE=2 SV=1
Length = 606
Score = 72 bits (176), Expect = 4e-012
Identities = 52/155 (33%), Positives = 69/155 (44%), Gaps = 5/155 (3%)
Frame = -1
Query: 923 TLKDHTAEVRAVTVHATNKYFVSASLDSTWCFYDMSSGLCLAQVTDDSEKVDYTAAAFHP 744
T K H V + +H T V+AS D TW + M G + + + K FHP
Sbjct: 321 TFKGHLLSVANLALHPTKPILVTASDDKTWKMWHMPGGDLI--MCGEGHKDWVAGVDFHP 378
Query: 743 DGLILGTGTAQSIVKIWDVKSQANVAKFGGHTGEITSVSFSENGYFLATSALD-GVRLWD 567
G L +G S VKIWD + Q V F H I SV F G +A+ +LD VRLWD
Sbjct: 379 AGTCLASGGGDSAVKIWDFEKQRCVTTFTDHKQAIWSVRFHHLGEVVASGSLDHTVRLWD 438
Query: 566 L--RKLKNFRTFDFPNANSVEFDHSGSYLGIAASD 468
L K + + N + + S L A+SD
Sbjct: 439 LPAGKCRMALRGHVDSVNDLAWQPFSSSLATASSD 473
>sp|Q9BVA0|KTNB1_HUMAN Katanin p80 WD40-containing subunit B1 OS=Homo sapiens
GN=KATNB1 PE=1 SV=1
Length = 655
Score = 67 bits (162), Expect = 2e-010
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 3/125 (2%)
Frame = -1
Query: 923 TLKDHTAEVRAVTVHATNKYFVSASLDSTWCFYDMSSGLCLAQVTDDSEKVDYTAAAFHP 744
TL H A + ++ H ++ S S D+ +D+ C+ + S+ V F P
Sbjct: 100 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAV--RCLRFSP 157
Query: 743 DGLILGTGTAQSIVKIWDVKSQANVAKFGGHTGEITSVSFSENGYFLATSALD-GVRLWD 567
DG L + VK+WD+ + +++F GHTG + V F N Y LA+ + D +R WD
Sbjct: 158 DGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Query: 566 LRKLK 552
L K +
Sbjct: 218 LEKFQ 222
>sp|Q8BG40|KTNB1_MOUSE Katanin p80 WD40-containing subunit B1 OS=Mus musculus
GN=Katnb1 PE=1 SV=1
Length = 658
Score = 67 bits (162), Expect = 2e-010
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 3/125 (2%)
Frame = -1
Query: 923 TLKDHTAEVRAVTVHATNKYFVSASLDSTWCFYDMSSGLCLAQVTDDSEKVDYTAAAFHP 744
TL H A + ++ H ++ S S D+ +D+ C+ + S+ V F P
Sbjct: 100 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAV--RCLRFSP 157
Query: 743 DGLILGTGTAQSIVKIWDVKSQANVAKFGGHTGEITSVSFSENGYFLATSALD-GVRLWD 567
DG L + VK+WD+ + +++F GHTG + V F N Y LA+ + D +R WD
Sbjct: 158 DGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Query: 566 LRKLK 552
L K +
Sbjct: 218 LEKFQ 222
>sp|Q15542|TAF5_HUMAN Transcription initiation factor TFIID subunit 5 OS=Homo
sapiens GN=TAF5 PE=1 SV=3
Length = 800
Score = 64 bits (154), Expect = 1e-009
Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = -1
Query: 770 DYTAAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHTGEITSVSFSENGYFLATSA 591
D FHP+ + TG+A V++WDV + V F GH G I S++FS NG FLAT A
Sbjct: 629 DVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGA 688
Query: 590 LDG-VRLWDL 564
DG V LWD+
Sbjct: 689 TDGRVLLWDI 698
>sp|Q8C092|TAF5_MOUSE Transcription initiation factor TFIID subunit 5 OS=Mus
musculus GN=Taf5 PE=2 SV=1
Length = 801
Score = 63 bits (152), Expect = 2e-009
Identities = 45/130 (34%), Positives = 59/130 (45%), Gaps = 18/130 (13%)
Frame = -1
Query: 770 DYTAAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHTGEITSVSFSENGYFLATSA 591
D +HP+ + TG+A V++WDV + V F GH G I S++FS NG FLAT A
Sbjct: 630 DVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGA 689
Query: 590 LDG-VRLWDL------RKLKNFRTFDFPNANSVEFDHSGSYLGIAASDIRVFQTASVKAE 432
DG V LWD+ +LK S+ F G L + D V
Sbjct: 690 TDGRVLLWDIGHGLMVGELKGHT----DTVCSLRFSRDGEILASGSMDNTV-------RL 738
Query: 431 WNPVKTLPDL 402
W+ VK DL
Sbjct: 739 WDAVKAFEDL 748
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,745,191,639
Number of Sequences: 518415
Number of Extensions: 102745191639
Number of Successful Extensions: 656160410
Number of sequences better than 0.0: 0
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